Ctenopharyngodon idella (grass carp): 127513336
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Entry
127513336 CDS
T08802
Name
(RefSeq) uracil DNA glycosylase a isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127513336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127513336
Enzymes [BR:
cide01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
127513336
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127513336
Prokaryotic type
127513336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF6374
GlnD_5th
Motif
Other DBs
NCBI-GeneID:
127513336
NCBI-ProteinID:
XP_051750989
LinkDB
All DBs
Position
5
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AA seq
300 aa
AA seq
DB search
MFSNIACLSFLNVRMPALLAKRTWNSTKYVKISPQGKKQKLESDAVTFSPSLSPEQLERI
SRNKKAALERLAAHQAAPDGIGESWKKALTAEFGKNYFKSLMSFVAEERKKHTIYPPSHE
VFTWTRTCDIQDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLVNIFKELASDINGF
EQPGHGDLTGWANQGVLLLNAVLTVRAHQANSHKDKGWEIFTDAVVHWLSTNMEGLVFIL
WGSYAQKKGAAINKKRHHVLQAVHPSPLSAHRGFFGCKHFSKTNELLKKSGKKPIDWSAL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatatagcttgtcttagttttttaaatgtacgaatgccggcccttttggcc
aaacgaacatggaattcaacgaaatacgttaaaatatcgcctcaggggaaaaagcaaaag
ttggagagcgacgccgttacattctcaccatcactgagtcctgagcaacttgaacggatc
tccagaaacaaaaaggcggctctggaacggctcgctgcacaccaagctgctccggacggg
atcggagagagctggaagaaagcgctcaccgcagaattcggaaagaactactttaagtca
ttgatgtcttttgtcgctgaggagaggaaaaaacacaccatctatccaccttcacatgaa
gtcttcacctggacacgaacttgtgacatacaagatgtgaaggttgtgatacttggccag
gacccgtatcatgggccaaaccaggctcatgggctttgcttcagtgttcagagacctgtg
ccacctccaccaagcttggtgaacatattcaaagaactggcttcagacatcaacggcttt
gagcaacccggtcatggagatcttactggatgggcaaatcaaggagttctgttgctgaat
gctgtgctgactgtgcgtgcacaccaggccaactctcacaaagacaagggctgggagatt
ttcacagatgctgtggtacactggctcagcactaacatggagggtcttgtttttattctc
tggggctcttatgctcaaaagaaaggggctgcaattaacaagaaacgacaccatgttctg
caagctgtccatccctcgccactgtctgctcaccgtggcttcttcggatgtaaacatttc
tcaaagaccaatgaactactaaagaagtcaggaaagaagcccattgactggagcgctttg
tga
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