Ctenopharyngodon idella (grass carp): 127513339
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Entry
127513339 CDS
T08802
Name
(RefSeq) ectodysplasin-A isoform X1
KO
K05480
ectodysplasin-A
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127513339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cide04052
]
127513339
Cytokines and neuropeptides [BR:
cide04052
]
Cytokines
Tumor necrosis fators
127513339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
TNF
Motif
Other DBs
NCBI-GeneID:
127513339
NCBI-ProteinID:
XP_051750993
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Position
5:22667231..22708664
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AA seq
360 aa
AA seq
DB search
MLTDLHAAMVPKREPAKLEERERTQAACECQSQCNNCKIFLSLFILSLSLHLVTLFCYLD
LRSELKREISQKNKDEVSSTGPIPHYEATAPVLRLPDTDHPTIDDQSRWRDEHTRGLERV
IHRTKRSETNGKKKGERKKGKKGPPGAPGPPGPPGPQGPPGIPGIPGIPGSNAMGPSGPP
GPPGPAGPPGPQGPPGPQGPSGGADKAKHRETQPAVVHLQGQETTIQVKEDLSEGVLKNW
RMISIHQRVFKMHSRSGELEVLLDGTYFIYSQVEVYYLNFTDIASYEVMVDKTPFLRCTR
SIETGQRKFNTCYTAGVCLLRARQRISIRMVYEDTSISMSNHTTFLGSIRLGDAPAAGHT
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgacctgcacgcagccatggtaccgaagcgcgagccggcgaagttggaagag
cgcgagcgcacgcaggcggcgtgtgagtgccaaagccaatgcaacaactgcaaaatcttc
ctgagtttattcatcctctcgctctctctgcacctcgtcactctcttctgttacctggac
ctgcgctcggagctcaaacgcgaaatatcacagaaaaacaaagatgaggtgtcatcaacg
gggccaatcccgcactatgaagccacagcgccagtgctccggttaccggacaccgaccac
ccaacaatagacgatcagagcagatggagggatgaacacacaagagggctggagagagtc
attcatcgtaccaaacgttcagaaactaacggaaaaaagaaaggagagcggaaaaaaggc
aagaaagggccccctggcgctcctggacctccaggcccacctggtccacaaggtcctcct
ggaattccggggatcccggggatcccaggcagtaatgcaatgggtccatctggcccacct
ggccctcctggacctgcagggccacctggaccacaaggtccacctggaccacagggacct
tcaggtggcgccgataaagccaagcacagagagacacagccagctgtggtgcatcttcaa
ggtcaggaaaccactattcaagtgaaagaagatttgtcagaaggtgtgttgaagaattgg
agaatgatctcaatccatcagagagtgtttaaaatgcactcgcgctctggagagctggaa
gtcctgcttgacggaacatactttatatatagtcaggtagaagtatactacctgaatttc
acggacatagcaagttatgaggtgatggtagataagactccattcttacgctgcacgcga
agcatcgagaccggccagcgcaagtttaacacctgctacaccgcgggtgtgtgtttgttg
cgagcgcgccagaggatctccatccgcatggtgtacgaggacacctccatctccatgagc
aaccacaccaccttcctgggcagcatccgtctaggggacgccccggctgctggacacacc
tga
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