Ctenopharyngodon idella (grass carp): 127513367
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Entry
127513367 CDS
T08802
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127513367
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127513367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
127513367
NCBI-ProteinID:
XP_051751036
LinkDB
All DBs
Position
5:32836528..32914262
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AA seq
1647 aa
AA seq
DB search
MPLCRRMDFSALHSLLLLLFTTFSHVLAGMDSCYNEEGIPSRCLPKFENAAFSRSVIVSN
VCGIPPEDYCMQTGSTRSCHHCDASDWELNRNATYLTDFHTDEEPTWWQSQSMFYGVQYP
NSVNITLHLGKSFEITYVRLKFYTSRPESFAIYKRTEENGPWQPYQYYSASCRKTYGRDN
KGFIRPGDKERMALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSPVLQDWVTATDIL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASDCMTNEEGHLVCACEHN
TAGVDCQHCAPFYQDRPWARATADSANQCVKCNCSGLADECVFDAEQYRSTGSGGRCVGC
RENTAGPHCERCRENSFRSFPQHPCYDCNCNAMGSVSLQCDAEGVCVCWPGVSGVKCDIC
KSGFHSLGPGGCRLCECDDRGSVGACSAEDGHCYCKTNVEGQSCNRCKPGSFDLQLDNPD
GCKKCFCFGHSVACSSSNQYMAFNITSDFLEDPDGWKGVFSEGHEQSLIWKEGEVYLLPY
REENGFYKAPDKYLGNMLLSYGRTLSVSFTAELEELLPRSVTVMLEGSGILVSADLYSKQ
DPYSSLEKTPINTFTLRLTEKDVNPSIAPFEFLRMLYNLTALHISNAGGQNYTSQLSRVT
LESAVQTTYHPDVFPHAPWVEVCTCPAGFTGKFCELCAPGFTRETPNGGPFSPCVPCNCN
QHGTCDPETGVCDCRDFTTGRYCEHCEDGYYGNALTGSPGVCLPCPCPDRTTCAQVPKMG
DVVCTNCPTGQRGVRCELCDDGFYGNPLGWGGTVQPCVMCECNGNVDPNAVGVCDHMTGR
CLKCLGHTTGDHCEKCRSGYYGNALANELNPERKCKPCACNVAGTSGSLNDCHPDTGNCV
CLSHVTGRDCGECETGYFNLQPGLGCEMCNCNPIGSSSSACHPVTGQCMCRTGVEGMSCD
TCRMGFFGFSSRGCRACNCDPMGSTSMQCHDNGTCSCRHGFVGYKCDKCKLNYYQNRLTH
QCEECPVCYSLIRDQASKLKARLQELETLLSSYDCNRHSRQYRGRQQHRHQHNGLDNHIQ
KDQVEDYLPNALEDLLAIQEAREAFIKQFSQLETSAQTLQLQLRSIATALNCNLTDSGKE
SEEGKILKGENECQELVDTLSKALNMQDQLQKMTLDLNSMVIPSVIPKEPNKWNVIVNES
EVLVKSHKEMAAHIEQTAEEAFKMANRTYSQLIALLEDNSTESHVLDLTEKLEEMQQLKE
NLTLEVNETLVTHLSLQKHNSEIAAILENITASLSELRRTDGNFTLTVEESNIASFSQML
NQTDVTATQYPELTESEDLLNRTTELEISVQSKEHMVNKTKGEIQPHMDSAEKHLKTVQE
LKELMAVAEGFKVSAVSSVVTGKEVEAEILSLQKDLEDMEQDWPQLPTLIKGYLKREKML
KEKTLVDVKKKLDQTEIKPAVENATAARSTAKQAKESSDAVAKGAKASLTQGKRAKHASG
QLRSAVDTTLEQLTELESQAAQKQQTMEAEEDMLSSRSMINNMETAKSQLQSFTNTLTLL
LKQLEANVVLENYDHILNETATRLHVLRGAVESPSLTGKIQRLQSAAHDQEKQLQNLKQN
LQDIQEERDSLTDIAQNLPKTCPQKGH
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgccattgtgcagaaggatggatttctctgcacttcactctcttttacttctgcttttc
accaccttctcccatgttcttgctggaatggactcttgttacaatgaggagggcatcccg
agccgctgtttgcctaaattcgaaaatgcagccttcagtcgctctgttatcgtttcaaac
gtgtgcggtatcccacctgaggactattgcatgcagacgggatccacacgctcatgtcac
cactgtgatgcctcggactgggaactgaatcgtaacgccacttacctgactgacttccac
acggatgaagagcccacctggtggcagagccagtccatgttctatggagttcagtatcct
aattcggttaacatcacactgcatcttggcaaatcctttgagatcacatatgtccgtttg
aagttctacaccagccgaccagagagctttgccatctacaagcgtacggaggagaatgga
ccatggcagccataccaatattacagtgcttcctgtcgcaagacgtacgggagggacaat
aagggcttcatacgtccaggcgataaggaaaggatggcactctgcacggatgagtttagt
gacatctctccactaaccggcggaaatgtggccttctccacattggaaggacgacctagt
gcctacaacttcgaccagagtcctgtgttacaggactgggtgacggctacggatattctc
atctctctggacagattgaacacgtttggagacgagttcttcaaagatgccaaagtgctt
cgctcatatttttatgccatatctgatttctccgtggggggcagatgcaagtgtaatggc
catgccagtgactgcatgaccaatgaggagggacatttggtgtgtgcttgtgagcataac
actgcaggggtcgactgtcagcactgtgcccccttctaccaggaccggccatgggcacgg
gccaccgctgattcagccaaccagtgtgtgaagtgtaactgcagtggtcttgctgatgaa
tgcgtgtttgatgctgagcagtaccgcagcacaggaagtggggggcgctgtgttggctgc
agggaaaacacagctggccctcactgtgagcgatgcagagagaactcctttagatcattc
ccgcagcatccctgctatgactgcaactgtaatgcaatgggctctgtgagtttgcagtgt
gatgcagagggagtgtgtgtgtgctggccaggtgtgtctggtgtgaagtgtgacatttgc
aagtctggcttccattctctcggccctggtggatgcaggttgtgtgagtgtgatgacagg
ggcagtgtaggagcgtgttcagctgaagatgggcactgctattgcaagacgaatgtagag
ggacagtcctgcaacaggtgtaaaccaggctccttcgacctccagctggataacccagat
ggctgtaagaaatgtttttgctttggacactccgtcgcctgttcatcctccaatcaatac
atggcttttaatattacttcagacttcctagaagatccagatggctggaagggtgtgttc
tccgaagggcacgaacaatccctcatctggaaggagggagaagtctatctgttgccctac
agagaagagaatggcttctacaaagcacctgataaatatctggggaacatgttgctaagt
tacggacggacccttagcgtgtcatttacggctgagctggaggaactcttgcccagaagt
gtgaccgtgatgctggagggctctggaatattggtttctgctgatttgtactctaaacag
gatccttattcctcactggagaagacacccatcaacaccttcactctcaggttgacagag
aaggacgtaaatccatctatagccccatttgagtttcttcgaatgctttacaatctaact
gctctacacatcagtaatgcagggggccagaactatacctctcaactctccagggtaacc
cttgaatctgcagtccagacaacctaccatcctgatgtgtttccacatgctccgtgggtg
gaggtgtgtacatgtcccgcaggattcaccgggaagttctgtgaactctgtgctcctgga
ttcacaagggagacccctaatggtggacccttctctccatgtgtaccttgcaactgcaat
caacatgggacctgcgatcctgagacaggtgtgtgtgactgcagagacttcaccaccggc
cgttattgtgagcattgtgaagatggttactatggcaatgcactgactggcagcccaggc
gtctgcttaccttgtccttgtccagatcgcaccacctgcgcccaggtgccaaagatgggg
gatgtggtttgtaccaactgtccgacaggccaaaggggtgtacggtgtgaattgtgtgac
gatggtttctatggcaaccctctgggctggggtggcacagtgcagccgtgtgtgatgtgc
gagtgtaatgggaacgtggatcccaacgctgtgggcgtgtgcgatcacatgactggacgc
tgtctgaaatgcctgggacatacgactggggaccattgtgaaaaatgcagatcaggttac
tacggcaacgcattggccaatgagcttaacccagagcgaaagtgcaaaccttgtgcctgt
aatgtggctgggacatcaggttccctgaatgactgccacccggatacaggaaattgtgtt
tgcctgagtcatgtgacaggaagagactgtggagagtgcgaaactggctacttcaacctg
cagccaggcttgggctgtgagatgtgtaactgcaatcccattggctcctcctcttcagca
tgtcatccagtcacaggacagtgcatgtgtcgaacaggtgtggaggggatgtcatgtgac
acttgtcgaatgggattcttcggtttctcctctagaggctgcagagcatgtaattgtgac
cccatgggctcaacctcaatgcagtgccatgacaacgggacatgttcttgtcgccatggg
tttgtcggttataagtgtgacaagtgtaaactgaactactaccagaaccgcctgacccac
caatgtgaggagtgccctgtgtgctacagtctcatcagagaccaggccagtaaactgaaa
gccagactgcaggagttggagacgctgctcagcagttatgactgtaatagacacagcaga
cagtatcgtgggcgccagcagcacaggcaccaacataatggcctggacaatcacatacag
aaggaccaggttgaagactatctgcccaatgccctggaggacctccttgctattcaagag
gctcgtgaggccttcattaagcagttctcacagctggaaacatctgcccagaccttacag
ctgcagctgcgtagcattgcaacagcgctaaactgcaatttgacagacagtggaaaagaa
tcagaggaaggaaagattctaaagggtgaaaatgagtgtcaagagcttgttgacacttta
tccaaagctctaaatatgcaggaccagcttcagaagatgactcttgaccttaacagcatg
gtaatcccttcagtaatccctaaagaaccaaacaaatggaatgtcatagtgaacgaatct
gaggtgctagtgaaaagtcacaaagagatggcagctcatatagagcagacagcagaagag
gcctttaaaatggctaacagaacctattcacagctgatagctctactagaagacaactcc
acagagtctcatgtactggatctcacagagaagctagaggagatgcagcagttgaaggag
aatctgactcttgaggttaatgagactttagtgacacacctgtcacttcagaagcacaac
tctgagatagccgccattttagagaacatcaccgcttcactatcagaactacgcagaacg
gatggcaatttcaccctgacagtggaggagtccaatatagcatctttctcacagatgctt
aatcaaacagatgtcacagcaacccagtatcctgagctcacagagagcgaggacctcctg
aacaggacaactgagttggaaatttctgttcagtccaaagagcatatggtaaataagacc
aaaggggaaattcagcctcacatggacagtgctgaaaaacacctgaaaactgttcaagag
ctcaaagagctgatggctgtggctgagggatttaaggtgtcagccgtctcctctgtggtg
acaggaaaagaggttgaggcggagatcctatctctacagaaggatctggaagacatggaa
caagactggcctcaactgcctacactcatcaaagggtatctgaagagagagaagatgctg
aaagaaaagaccctggtggacgtgaaaaaaaaacttgatcagaccgagatcaaacctgca
gtggagaatgctactgctgcaagaagcacagctaaacaagccaaagagtcttcagatgca
gtggctaaaggtgccaaagcatctctgacacaggggaaacgggcaaaacatgcatctgga
cagttgcgttcagctgtggacaccaccctggagcagttgactgagctggaaagccaagct
gcgcagaaacagcaaaccatggaggcagaggaggacatgctttcttcaaggagtatgata
aacaacatggagacagccaagagtcagctacagtcctttacaaacacactaactctgctt
cttaaacaactggaagctaatgtagtgctggagaactatgaccatatcctgaatgagacg
gcaacccgtcttcatgttctccggggtgccgtggagagtccctctctcaccggaaagatc
cagaggcttcagagtgctgcacacgatcaagagaaacagctgcaaaatctcaaacagaac
ctgcaggacatacaagaagaaagagacagtctgactgacatcgcccaaaacttgcccaaa
acatgcccacaaaaagggcactga
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integrated database retrieval system
