Ctenopharyngodon idella (grass carp): 127513388
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Entry
127513388 CDS
T08802
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03020
RNA polymerase
cide03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127513388
09124 Replication and repair
03420 Nucleotide excision repair
127513388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127513388
03400 DNA repair and recombination proteins [BR:
cide03400
]
127513388
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127513388
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127513388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
127513388
NCBI-ProteinID:
XP_051751075
LinkDB
All DBs
Position
5:complement(6109461..6112359)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITIVKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccaccagcattcgagtcatttttgctgtttgagggagaaaagaagatcaca
atagttaaagacaccaaggtgccgaatgcatgtctgttcacactgaataaagaggatcac
acgctggggaacatcatccgctcgcaactgctgaaagaccctcaggtgctgtttgctgga
tataaggttcctcatcctctagaacacaagattgtgatccgcgttcagacgacaccagac
tacagtccccaggaagccttcactaatgccatcactgatctgatcagtgagctgtccctg
ctggaggagcgattcagggttgccatcaaagacaagcaggagggaatagaatga
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