Ctenopharyngodon idella (grass carp): 127513492
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Entry
127513492 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03440
Homologous recombination
cide03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127513492
03460 Fanconi anemia pathway
127513492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cide03032
]
127513492
03400 DNA repair and recombination proteins [BR:
cide03400
]
127513492
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127513492
DNA replication proteins [BR:
cide03032
]
Eukaryotic type
DNA Topoisomerases
127513492
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127513492
FA (Fanconi anemia) pathway
127513492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
127513492
NCBI-ProteinID:
XP_051751252
LinkDB
All DBs
Position
5:37159660..37175992
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AA seq
861 aa
AA seq
DB search
MRTVFMVAEKPSLAQSIAKILSKGSCSTRKGLNGACSVHEYTGSFVGQNVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEAKGCDFVVLWLDCDK
EGENICFEVLDAIQPVMNKSFGSERTVYRAKFSSITDTDICNAMNRLGEPNKNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVVQAKVFKGKDSPLFLDWDRVRVFDRDVGQMFVNMAKTAKEAKVDSVTXKEKAKQRPLA
LNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQANS
SFWGETVKALLSEGINRPRKGADAGDHPPITPMRAASESELGSDGWRLYDYITRHFIATV
SPDCKYLQTTISFSIATESFTCSGKTLISAGYTEVMPWQGIPLEEALPVCERGDTFTVDE
IKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRKLKPTNL
GIVLVHGYYKIDADLVLPTIRSAVEKQLTLIALGKANFQQVLQHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPIAATGKPLSRCGKCRRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELKCPLDEFELVLWTSGSRGKSYPVCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECETGVLVFDPTSGPKWRMACNKCNVVVHFFEHAHKVQVSQDSCDSCEASLVV
VDFNKTRSPLPDGETQHTGCVFCDPVFQDLVELKHATMRHPMHRAGGARRGRGKGRGRRP
MGRGNPKKPKDKMAALAAYFV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtgtttatggtggctgagaagccctctctggctcagtccattgccaaaatc
ctctctaaaggtagctgttcaacccgaaaaggcctaaatggagcgtgctcagtccatgag
tacaccggaagctttgtgggccaaaatgtgaggttcaagatgacgtccgtgtgtggacac
gtcatgagtctggactttatcggaaagtataacaactgggataaagtcgatccagctgag
ttgttcagtaaagctccgaccgagaagaaggaagccaaccccaaactaaatatggtcaaa
ttccttcaggttgaagcaaaaggttgtgactttgtcgtcctgtggttggattgtgacaaa
gaaggagaaaacatttgttttgaggtgttggatgccattcagcctgtgatgaataagtct
tttggtagtgagcgtacggtgtatcgggccaagttcagctccatcacagacacagatatc
tgtaacgccatgaatcgactcggagaacctaacaagaacgaggctctgtccgtagatgct
cgtcaggaactggacctcaggatcggctgtgctttcacacgtttccaaaccaaatacttc
cagggaaaatatgggaatttggactcctccttgatctcttttggtccctgtcagactcct
acactggggttttgtgtggaacgtcatgacaagatccagtccttcaaacctgaaacatat
tgggtcgtacaagcaaaggtttttaaagggaaggacagcccacttttcttggactgggac
cgcgttcgagtttttgaccgagatgttggtcaaatgtttgtcaacatggcaaagactgct
aaggaggctaaagttgactctgtgactnaaaaagagaaagccaagcagagacctctggca
ctgaatacagtggagatgttaagagtggccagttctgctttgggaatgggtccccagcat
accatgcagatagcagagcgtctctacacacagggttatatcagctatcctcgcacagag
acgacacattaccctgaaaactttgacctgaagggcaccctcaaacaacaggccaacagc
tccttctggggtgaaacggtaaaagctcttctctctgagggcattaataggccaaggaaa
ggagcggacgcaggagaccatccgccaatcacacccatgagagccgcctctgagagcgag
ctgggcagcgatggctggcgtctgtatgattacatcacacggcacttcatagcgacggtc
agtcccgactgtaaatacctgcagactacgatttccttcagcattgccacagagagcttc
acatgcagcgggaagacgctcatctctgctggttacactgaagtgatgccctggcagggt
attccgctggaagaggccttgccggtgtgtgagagaggagacacattcacagtggacgag
atcaaactactggagaaacagaccaatccaccagactacctcactgaggccgagctcatc
acactcatggagaaacacggcattggtacggatgccagcatccccgtccacattaacaac
atctgccagaggaactatgtgacggttgaaagtggccgcaaactcaaacccaccaacctg
gggattgttctggttcacggttactataagattgatgcagatttggttctgcccacaatc
cggagtgctgtggaaaagcagctcactctgatagctttaggaaaggcaaacttccagcag
gtcttacagcacactctggacatcttcaagaggaagttccactactttgtggactccatt
gcaggcatggatgaactgatggaggtgtccttctctcccattgccgctactgggaaacca
ctctctcgctgcggcaaatgccgtcgcttcatgaagtacatccaggctaaacccagtcgt
ctgcactgctctcactgcgacgagacctacagtttacctcagaacggagccattaagctg
tacaaagagctcaagtgtcccctggatgagtttgagctggtgctctggacctcagggtct
cgtggcaaaagctaccctgtgtgtccatactgcttcagcaaccctcccttcagagacatg
aagaaagggatgggctgtaacgagtgcacccacccttcctgtcagcactccctcaactct
cttgggatcggtcagtgcgttgaatgtgagacgggcgtcctggtcttcgatcccacctcg
ggcccaaagtggcgcatggcctgcaacaaatgcaacgtggtggtgcatttcttcgagcac
gcccataaagtgcaggtgtcccaggacagctgtgattcctgcgaagcctctctggttgta
gtggacttcaacaagacacgctcgccattgcccgatggtgagacgcagcacactggctgc
gtgttttgtgatcctgtgttccaggatctcgtggagctgaaacatgcgaccatgcggcat
cccatgcaccgggccggaggagcccgcagagggagagggaagggaagagggaggaggccc
atggggagagggaatcctaaaaagcctaaagataaaatggcagccctggcagcttatttt
gtataa
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