Ctenopharyngodon idella (grass carp): 127513515
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Entry
127513515 CDS
T08802
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4b isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00061
Fatty acid biosynthesis
cide00071
Fatty acid degradation
cide01100
Metabolic pathways
cide01212
Fatty acid metabolism
cide03320
PPAR signaling pathway
cide04146
Peroxisome
cide04216
Ferroptosis
cide04920
Adipocytokine signaling pathway
Module
cide_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127513515
00071 Fatty acid degradation
127513515
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127513515
09143 Cell growth and death
04216 Ferroptosis
127513515
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127513515
03320 PPAR signaling pathway
127513515
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cide01004
]
127513515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127513515
Enzymes [BR:
cide01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127513515
Lipid biosynthesis proteins [BR:
cide01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127513515
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of breast milk
127513515
Exosomal proteins of breast cancer cells
127513515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127513515
NCBI-ProteinID:
XP_051751321
LinkDB
All DBs
Position
5:complement(25831048..25847456)
Genome browser
AA seq
671 aa
AA seq
DB search
MLPQCERARSISGCPEGPYRAVESADALATQNFEGIDTLDKLFLHAVKRFSQAPCLGTRE
VLSEEEEKQANGKLFKKLVLGEYSWMTYEEVSQTVESFGSGLAALGQRPRNTIAIFCETR
AEWMITAQACFRRNYPLVTLYATLGEDAVAFGLNQCGATHLITSIELLQSKLKNILSAVS
GLQHVIYAGSGEVCQADYPQSLTIHSMDEVMELGAKPENLSEKYERPTASDLAVVMYTSG
STGQPKGVKMQHSNLIAGMTGQCQRIPGLGSQDSYIAYLPLAHVLELTAEISCVSYGCRL
GYSSPHTLTDQSSKIKSGGKGDCSVLKPTLIAAVPEIMDRICKNVNGKLREMSVIRRTLF
KVGYNYKLQQVSRGADSPVCNMLIFKHVNLLLGGCVRLMLSGGAPLSASTQRFMNVCFCP
VAVGYGLTETCGAGTISEFTDYSTGRVGAPLICSEIKLRDWPEGGYTSQDKPHPRGEILI
GGPNVAIGYYGSEGEGENDNFWVDEVGQRWFCTGDVGEVHPDGCLQIVDRKKDLVKLQAG
EYVSLGKIEAALKNSPLIDNICVYASSDQNYVISFVVPNQKQLTELAKKNGIESEWEELC
NHTMMEDEVLKVIKEIAVKNKLERFEVPQKIRLSSEVWTPETGLVTDAFKLKRKELKNHY
IKDIERLYGNK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctcagtgtgaaagagcgcggagtataagtggatgtccagaagggccgtatcga
gcggtagaaagtgcagatgctctcgctacacaaaattttgagggcatagacacgctggac
aaacttttccttcatgctgtgaagagattcagtcaggcaccctgtctgggcaccagagag
gtccttagtgaagaagaagaaaaacaagccaatgggaagctctttaagaagttggtccta
ggagaatacagctggatgacctatgaagaagtcagccaaacagtggaatcttttggcagt
ggtctggcagctttgggtcaacggccacgaaataccattgccatcttctgtgagacacgg
gcagaatggatgatcacagcgcaggcctgcttcagacgcaactacccattggttacactg
tatgcaactctgggtgaagatgctgtagcttttgggctgaatcagtgtggagccactcat
ctcatcaccagcatagaactgttgcagagcaaactgaagaacattttgagtgcagtctca
ggtttgcagcatgttatctatgcaggcagtggtgaagtatgtcaggctgattacccacag
tctctcaccattcacagcatggacgaagtaatggagcttggggcaaagccagagaactta
agtgaaaagtatgagaggccgactgcgtctgatctcgcagtggttatgtataccagtggg
tctaccgggcagcctaaaggggtgaagatgcaacacagtaatctaattgcaggaatgacg
ggtcagtgccagcggatcccaggcctgggatcacaggactcatatatagcttatctccca
ttggctcatgtgctggagctgacagcagaaatatcctgtgtgtcatatggctgcaggctc
ggatactcctccccacacacactcacggaccagtccagtaaaataaagagtggcggtaag
ggagattgttctgtgctcaaacccaccctgatagcagcagtaccggagataatggatcgt
atctgcaagaatgttaatggaaagttgagagagatgtcagtgattaggaggactctgttt
aaagtgggatacaactataaactacagcaggtgtcacgaggagctgattctccggtgtgt
aacatgttgattttcaagcatgtgaatttgctgctgggagggtgtgtacgcctgatgttg
agcggaggggctccactgtctgcttccacacagagatttatgaacgtgtgtttctgcccc
gtcgccgtgggttacggccttacagagacctgtggagcaggaactatctcagaatttact
gattatagtacaggacgagttggagctcctctcatttgctctgaaataaaactgcgagac
tggcctgagggtggatacaccagtcaggacaagcctcacccacgaggagagattttgatt
ggtggaccgaatgttgccataggatactatggaagtgagggggagggagaaaatgacaac
ttctgggtggacgaggtggggcagcgctggttttgtaccggagatgttggggaagttcat
ccagacggttgtctgcagattgtggatcgtaagaaggacctggtaaagctgcaggcaggt
gaatatgtgtctctggggaagatagaagccgccctgaaaaacagccccctcattgataac
atctgcgtctatgccagcagtgatcagaactacgtgatcagctttgtggtgcccaatcag
aagcaactgactgagctggcaaaaaagaatgggatagagagcgagtgggaggagctttgt
aaccacaccatgatggaggatgaagtgctaaaagttatcaaagagattgcagtaaaaaat
aaactggaaaggtttgaggttccacagaagattcgtttaagttctgaggtttggactcca
gaaacagggctggtgacagacgccttcaaactaaagagaaaagagctgaaaaatcattat
ataaaggacattgagaggttatatgggaataaatga
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