Ctenopharyngodon idella (grass carp): 127513629
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Entry
127513629 CDS
T08802
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127513629
Enzymes [BR:
cide01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
127513629
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127513629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
UQCC2_CBP6
Motif
Other DBs
NCBI-GeneID:
127513629
NCBI-ProteinID:
XP_051751574
LinkDB
All DBs
Position
1:41586734..41599261
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AA seq
511 aa
AA seq
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MLSLKEKDRPVVRKLLCAGCCVRCVLRFCCVGSSSAYRRSYQDIHKELLTFISEENSPSG
EVKTDEPPNKRMRVEEDCVTPAETETDSDICPVCLGVLQDFCDSTFAKQVSDAVKKQQYE
FDSLVLTVSLPAQLSVREHSCWLHVKKEVREKSMCLGKDDVIQVKDAFKWAVQGKIGQEL
GAAVLANSPCEVSVGFVHPETEEDCHFLANTCPDCFKPTKNKASIFTRMAVVKALEKISD
EKFSRHYPCPPKKPNTRCTALDTTCLHTSVFIAGRYNKFSRELPQTPWVIDGERRMDGSV
EELIAAPLLSSFRADGFNFSSSGREDVDVRTLGNGRPFALELLNPHRAKFNRTEIKQLQE
TINQSSDKIRVRYLQIVTREATSRMKEGEEEKTKTYSALIWTQKAIDDTDLEFLGNIKDL
KIAQKTPLRVLHRRPLAVRQRLIHSMSAVYLDTHHFTLKLCTQAGTYIKEFVHGDFGRTK
PNLCDLMKTDADILELDVESVDIDWPPAIPD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccctcaaagagaaggaccggcccgtggtcaggaagctgttgtgcgccggctgc
tgtgtgagatgcgtcctgcgcttctgctgtgtgggaagctcctctgcttacagacgatca
taccaggacatacacaaggagcttctcaccttcatcagtgaggaaaacagcccctctggt
gaggtcaaaacagacgagccgccgaataaacgcatgagagtggaagaggattgtgttaca
ccagcggagacggagacggactcagacatttgtcccgtctgtttgggagtcctgcaggac
ttctgtgattcgactttcgccaaacaggtgtcagatgctgtgaagaagcagcagtatgag
tttgacagtctagtgctgaccgtttctcttcccgctcagctgtccgtcagagagcattcc
tgctggttgcatgtcaaaaaggaagtcagggagaagagcatgtgtttaggtaaagatgat
gtcatccaggtgaaggacgcattcaagtgggccgtacagggaaagatcggccaggaactg
ggagctgctgttctggccaatagcccgtgtgaagtgagtgtcgggtttgtacacccagaa
acagaggaggactgtcatttcttagcgaacacctgtccagactgtttcaaacccaccaaa
aacaaagcgtccatcttcaccaggatggcggtggttaaagctctggagaagatctctgat
gagaagtttagcaggcattatccatgtccaccaaagaaaccaaacactagatgtacagcg
ctggacaccacatgtctccacacatctgtctttatagcaggtcggtataataagttttct
cgggagcttccgcagacgccgtgggtgatcgatggagagaggcggatggacggatccgtg
gaggagctgatcgccgctcctctcctgtcctcgttcagagctgacggttttaacttctca
tcttcaggacgagaagacgtggatgtgaggactctgggaaatggtcgaccgttcgctctg
gagcttctgaacccccatagagccaaattcaacagaaccgagatcaaacaactacaggag
acgatcaaccaatcatctgacaaaattagagtacgatacctacagattgttaccagggaa
gcaacaagccgcatgaaagagggtgaagaggagaagactaaaacctacagcgccctcatc
tggactcagaaagccatcgacgacactgatctggaattcctaggaaacattaaggatcta
aagattgctcagaagactccgctgagagtcctgcatcgccggccgctggcggtccgacag
agactcatccactccatgagtgccgtttacctggacacacaccacttcaccttgaagctg
tgcacacaggccgggacttacattaaagagtttgtgcacggagacttcggccgcactaaa
cccaacctctgtgacctcatgaagactgatgctgatattctggagctggacgtcgagtcc
gtagacatcgactggcctcctgctattccggattga
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