Ctenopharyngodon idella (grass carp): 127513640
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Entry
127513640 CDS
T08802
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127513640
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127513640
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127513640
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127513640
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
127513640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
127513640
NCBI-ProteinID:
XP_051751588
LinkDB
All DBs
Position
5:19827480..19914268
Genome browser
AA seq
2461 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYPFSSTRHPTEFTVPDYRTPLQDQQRRRLSLLSE
FHPGTERPPERRHGYEQQFHAVQAQQDQETLEAKRPRIENVSETHFTRAQPTGIVLAPPH
AIQDTIRASGEVKKETPFNVKVEASSPGGVPQVGEDADTSPSKLSKEELIQSMDRVDREI
AKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAEEAHK
ILEGLGPKVELPLYNQPSDTKVYHDNIKTNQMMRKKLILFFKRRNHARKQREQKICQRYD
ELMTEWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRSARPPSFRDDP
MNALSFTHIHRVGQRGTGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDS
EQRRVKFINMNGLMDDPMKVYKSRQFMNVWTEHEKEIFKEKFVQHPKNFGLIASFLERKC
VSDCVLYYYLTKKSQNYKTLVRRNFGNRRRRNQQITRPSQEDKTDDKNEEDKSEKSEKKE
DEEKKEEEEKDEKEDSKDISKDKEKCEGEEEEGKEQSTPRGRKTANSQGRRKGRITTRSM
ANNEAASVVAEEPPPPPPEQVLPEPAPPSKPEPVPKPAREAAKPSPAVSADTRGAVEAGE
TSRWTEDEMEIAKKGLVEHGRNWSAIAKMVGTKSEAQCKNFYFNNKRRYNLDNLLRQHKG
SRLRGNRDSSQSDPAPDEDEESDGPDNSSDTESAPSPSQTDPTKTSDSLTHPSSALDGTS
DLDVTAAKGPVADAKGPDPLYSELRVKVEKSPEGGVGDGLPQDERTHSAYEMQIHPKSEP
QDMEMTIPSSERAQVQVKIEPEVKDKEEKQGEQHHSDNDSSATCSADEDVEAEPDRQRLF
SLEKPSLLGTSGSVVVSSAKPLNMHQLQERAATIPPMVSPHSLYPHLAFRYAPLDRDRAQ
PPRHVSAPFGHSGVPGGALSGFAMFQHQIKAVHESVQEDKQRLDQNESDRRPRVTTHSPT
VLDREGKTFAYMPYDLKLMEQESHGGVGRPGSPYRLSPREPSKASPQPDGSNATRYSVPP
VLQPAPNQAVQNLSDVRMTFPRHRPPNIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTY
LPSQTHAVYVPEVVKTTGGSISLGLPRQQDPAKPVSYIKQEECSPRGQSAQAEGLLSRAQ
YEGVVRGGPIQIQDMRGPPGKGPEGVTFRGGSITQGTPALTQSNVAADLLKGTIAKLATE
DLSGPEKSRAEAYSKAHVIYEGPKGHILSFDAIKNPREGTRSPRMGHDLKRTYDIMEGSR
GHPARETAPYEGLISRALPRESPHESKDRSILAGSIMQGTPRASAEVYDEASKYGKQIKR
ESPPIRSFEGGITKGKPYEGVNTIKEMGRSIHEIPRKETQDSRKTPVLEGSITQGIPLKY
ESSTVNPSAIKHNVKSLITSPVKISHSAIEAPERERAKYEDVKASERVRHTSVVNSTSVL
RSTHTEAGKAQLSPGMYDDSNARRTPTYTSTSISRGSPLLRGQEGSITTGKPASHERKSA
LTPTQRDSIPAKSPVSGADPLGSHSPFDPHHRPGEMYRTHLPPHLDHSLAFHHRVLDPAA
YMFPRQPSPTGYPNTYQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREPSIAIP
YPPARGIIDLAQMPPTILLPHPGGTGSPSLDRITYIPGPQTPFPPRAFNPASISPGHPAH
HSATAAIVERERERENQREKERERERDRERERDQRERERAAVEYIRGGPEQPGRPGSRSF
LRSTSPSVRSQEGVLQQRPSIFQGTNSKSVITPLMQMPSQAAAAQANSRYSNAADALAAL
VDAAASAPQMDVVKVKESKHNNGSSRDDDMMSSRRAAQESQEVERRSMQSPYGDVSLPGG
KPSHPVYAEGGGASGSKEKAPPTKSRMEEELRTHGKTTITAANFIDVIITRQIAPDKDSR
ERGSQSSDSSSSMSSSRYEAQGGIEVISPANSPALREEKNEGPFPSEKSSQPPSGMRFDI
SRYRPSGDSGPSAPQQPPSSQADSYGPVPKTHRIMTLADHISHIITQDFAKSQDPPPSSS
SLPSSSSSTFQSSGVGGVVGRVKPPNRYSPENPAPTTHHQRPPSRVSPENSSDKPRARPG
RSPDRGRGLVEGSYEPISPPQGYSGMDKQEASMLQSQRREQELPEQRNDSRSPGSGSYLP
SFFTKLESTSPMVMSKKQEIFRKAEVGNAQPGTEIFNLPAVTSSSSVNPRNHSFSDPASN
LGLEDIIRKALMGNMEEKQEDQQQQLGTGNTSGSMSSISESRQEASPSPNTGSYSGKQKL
QSKASSRKSKSPNPGQAYSAGERPSSVSSVHSEGDYHRQAPTWAWEDRPSSTGSMQFPYN
PLTMRMLSSTPPTSMACPSPSMQSQQQPQGGASGPVAPTRAWEREPPLLSEQYETLSDSD
D
NT seq
7386 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcgggctttccccccagccaggggtccttcagcagcgagcagagccgttac
ccaccacactcagtgcagtaccccttcagctccacacgccacccgacggagttcacggtt
cccgactaccgtacccccctgcaggaccagcagcgccgcagactttcactactgtctgaa
ttccaccctgggacagagaggccgccggagcgcagacatggttatgagcagcagtttcat
gccgtacaagctcagcaggatcaggaaactctcgaggccaagcgtccccgcatcgaaaat
gtatctgaaacacactttacaagagctcagcccaccggcatcgtactggcccctccacat
gccatacaggacaccatcagggcctctggagaggtcaagaaggaaacaccgtttaatgtg
aaggtggaggcctcgtccccaggtggagttccacaggtgggcgaagatgcggacacgtcg
ccctccaaactctctaaagaggagttgattcagagcatggaccgtgttgaccgtgagatt
gccaaggtcgagcagcagattttcaaactgaaaaagaaacagcaacaactggaggaggag
gcagcaaagccagtagagccagaaaagccagtgactccgccccctgtggaacacaaacat
cgcagcatcgtccagatcatttatgatgagaaccggaaaaaggctgaagaagcccataag
atactggaagggctcgggccaaaagtggagctgcctctgtacaaccagccctctgatact
aaagtctaccatgacaacattaaaacgaatcagatgatgaggaagaagctgattctgttt
ttcaagaggagaaaccatgcacgcaaacagagggagcagaaaatttgccagcggtatgat
gagctgatgactgagtgggagaaaaaagttgagcggatggagaataacccacggcgtaaa
gccaaagagagccgtacacgtgaatactacgagaggcagtttcctgagatccgcaaacag
cgcgagcaacaggaacgtttccagaggtcagccaggccccccagcttccgtgatgaccca
atgaacgctctgtcattcacacacattcaccgggtaggccagagggggacaggcctgtct
gccaccatcgcaagaagtgaacacgagatatccgagatcattgacggcctctcggagcag
gagaacaatgagaagcagatgaggcagttgtccgtcattcctcccatgatgtacgattct
gaacagaggagagtgaagtttatcaacatgaacggtctgatggatgacccaatgaaggtc
tacaaatcccgccagttcatgaatgtctggaccgaacacgagaaggagatcttcaaggaa
aagtttgtgcagcatccaaagaacttcgggctgatcgcttcatttttggaaagaaagtgt
gtgtctgattgtgtgctgtactattatttgactaagaagagtcaaaactataaaactctt
gtcagaagaaattttggaaatcgtcgacgaaggaatcagcagataacgcgaccttcacag
gaagacaagacagacgacaagaacgaagaggacaaatcggagaaatcagagaagaaagag
gacgaggagaagaaggaagaggaggagaaagatgaaaaagaggactccaaggacatcagt
aaagataaagagaagtgtgagggagaggaggaagagggtaaggagcagagcacgccacgc
ggccgaaagactgccaacagccagggcagacgcaaaggccgcatcaccacccgctccatg
gccaataacgaggctgcgtctgtggtggctgaagaaccacctccaccaccacctgaacaa
gttttgccagagccagcacccccttctaaacctgagccggtgccaaaaccagctcgagag
gctgcgaaaccctctcccgcagtcagcgcagacacaagaggcgcggttgaagctggagag
acgtctcgctggacagaggatgagatggagatcgccaaaaaagggctagttgaacatggt
aggaactggtcagccattgctaagatggtaggcactaagagtgaagctcaatgtaagaac
ttttacttcaacaacaagagacgatacaacctagacaatcttctacggcaacacaagggt
tcccggctccgtggaaatcgagactcatcacagagcgatcctgcgcctgatgaggacgag
gagagtgacggtcccgataacagttcggacacagagagtgcaccctctccatctcaaacc
gaccccaccaaaacctcagactctctaactcatcccagctcagctctggacggcacatca
gacctggatgtcactgcagccaagggcccggtggcagatgccaagggcccggatcctctg
tacagcgagctgcgggtgaaagtagagaagagtccagagggaggagttggagacgggctt
cctcaagatgaacggacacactctgcatatgaaatgcagatccatcctaagagcgagcca
caggatatggagatgaccatacccagcagtgaaagagcacaggtgcaagtgaagattgag
ccagaggtcaaggacaaagaggagaaacaaggggagcagcaccactccgataatgactct
agcgccacctgcagtgcggatgaggatgtggaggctgaacctgaccgacaaagacttttc
tctttggagaagccatcattgctgggcacttcaggctcagtggttgtgtcctcagccaaa
cccctcaacatgcatcagctacaggagcgggccgccaccatcccccctatggtcagtccc
catagcctctacccccacttagcattcagatatgcccctctggacagagacagggcccag
ccaccccgccacgtttcagctccatttggtcacagtggtgttcccggaggtgcattgagc
ggctttgcaatgttccagcaccaaattaaagctgtgcatgagtccgtgcaggaggacaag
cagagactggaccagaacgagtctgatcgcagaccacgagtcaccacccacagccccact
gtactggaccgagaaggtaagacgttcgcttacatgccatatgatctgaagctgatggag
caggaatctcatggtggagtgggcagaccgggctctccatacagactctctcctcgggag
cctagcaaagcctcaccccagcccgacggcagtaacgccacccggtacagtgtacctcca
gttcttcagccggcaccaaaccaggcagttcagaatctttcagatgtccgcatgacgttc
ccccgccacaggccgcccaacattccgtctcctccgcccctcattcccacctccaaacct
acagacaagccctccttcattcaggggggctccatttcacagggaacgccaggaacatac
cttccttctcaaacgcacgctgtgtacgtaccggaggtagtcaagaccacaggaggatca
atctcactcggcttgccaagacagcaagaccctgccaaacctgtgtcatatattaagcag
gaggagtgttctccacgtggacagagcgctcaggcagagggtctcttatccagagctcag
tatgagggagtggtcagaggaggacccatacagattcaggacatgagagggccacccgga
aaaggcccagagggcgtgacgtttagaggtggctcaattacgcagggcactcctgccctg
actcagtccaatgtagcagcggatctcttgaaaggcactattgctaaactggccacagag
gacctgagcggcccagagaagagccgagctgaagcttattctaaagctcacgtcatctac
gaaggcccaaaaggacacatcctctcttttgacgctattaagaaccctagagagggcact
agaagcccacggatggggcacgatctcaagcgcacatatgacatcatggaggggtcccgt
ggacacccagcacgtgagacagcaccttatgaaggtttgatcagcagagcattgcccaga
gaaagtccgcacgagtctaaggatcgatccatactcgcgggatccatcatgcaaggaact
ccaagagcctctgctgaagtctatgatgaggcctccaaatacggtaaacagatcaagagg
gaaagcccacccatacgctctttcgagggaggcatcacgaaaggtaaaccatacgaggga
gtgaacaccataaaggagatgggccgctcaattcatgagatcccacgtaaggagacccaa
gatagtcgcaaaactcctgttctggaaggatccattactcagggtattcctctgaagtat
gagagcagtactgtgaacccgtcggccatcaagcacaatgttaaatctctgatcacaagt
ccagtgaagatctcacactctgccatcgaggcacccgagcgcgagagggccaagtacgaa
gatgtaaaggcgtccgagcgtgtccggcacacttctgttgtaaactctacgtctgttctg
cgctccacacacacagaggcgggaaaagctcagctcagtccaggcatgtatgatgacagc
aatgcacgcagaacccctacatacaccagcacctccatatccagaggatcacccctactg
cgagggcaagagggaagtataacaacaggtaaaccggcttctcacgagaggaagagcgca
ctgaccccaacccagagggacagtattcccgccaagtcgcctgtgtccggggctgaccct
cttggctctcacagcccctttgacccccaccacagacctggagagatgtaccggactcac
ctgccaccacacctggaccacagcctcgcctttcaccacagagtcctggacccagcagcg
tacatgttcccacggcaaccatcaccgaccggttaccccaacacttaccagctgtacacc
atggagaatactcggcaaaccattctgaatgattacatcacctcgcagcagatgcaggtc
ataccgcgccctgatgttgcgaggggactgtcaccacgtgaaccgtccattgccatccca
tacccaccagctagaggaataattgatctagcccagatgccacctaccatcctgttacct
caccctggggggacaggttccccctccctggaccgcatcacctacatccctggacctcag
acccctttccctcctagggcattcaaccctgcctccatatctccaggacatcctgcccat
catagtgccactgcagccattgtggagagagagagggagagagagaatcagagagagaag
gaacgtgagagggagcgggatcgagaaagagagagagatcagagagaacgggaacgtgct
gctgtagaatatatacgtggaggtcctgagcagcctggccgaccaggcagccgtagtttc
ctgcgttccacctcaccctctgtgcgatcacaggagggtgtcctccagcagcggccgagc
atcttccagggcaccaactctaagagcgtcattaccccactcatgcaaatgccctcacaa
gcagctgcagctcaagccaactcccgatacagcaatgcagctgacgccctcgccgccctg
gtggacgctgcggcctctgccccgcagatggatgttgtgaaagtcaaggagagcaagcat
aataacggtagctcccgggatgatgacatgatgtcatcacggcgagcagcacaggagtca
caggaggtggagcgccgttccatgcaatcaccatatggggacgtgtcacttcctggtggg
aaaccttcccatcctgtgtatgcagagggtggaggagcttcagggagcaaagagaaagcc
ccacccacaaagtcacgcatggaggaggagctgcgcacgcatgggaagaccaccataact
gctgcaaacttcattgatgtcatcatcacgcgccagattgccccagataaggactcccgt
gagagaggctcacagagctctgactcctccagtagcatgtcatccagtcgttatgaggct
cagggtggaatagaggtgatcagcccagctaactctccagccctgagagaagaaaagaac
gaaggacctttcccatcagaaaagagctctcagccaccctcaggaatgaggtttgacatt
agccggtacaggccatcaggagattcaggaccttctgcaccccagcagcccccctcctca
caagcagacagttatgggccagtcccgaaaacacaccgcatcatgaccctagctgaccac
atttcgcatatcattacacaagactttgccaagagccaggatcctcccccatcatccagt
tcgctgccttcctcttcatcctccacattccagagctctggcgtgggaggtgttgtaggt
cgagttaaaccccctaaccgctatagcccagaaaacccagctccaacaacacatcaccag
agaccaccaagcagagtatctcccgagaactcttctgataaaccaagagccaggccaggc
aggtctcccgatcgaggtcgagggctggtcgagggcagctatgagcccatctctcctcct
cagggttattctgggatggataaacaggaggccagcatgctgcagagtcagagacgagag
caggagctccccgaacagaggaatgactcgcgctccccaggcagtggcagttacctgccc
tctttcttcaccaaactggagagcacgtctcctatggttatgtccaaaaagcaggagatc
ttccgcaaagcagaagtcggtaacgctcagccaggcacagagatcttcaatctcccagca
gtaacgtcatcaagcagtgtaaaccctagaaaccactcgtttagcgatccagccagtaat
ctgggtctggaggacatcatcaggaaggctctgatggggaacatggaggagaagcaggag
gaccagcagcagcagctggggacaggaaacacctcaggaagcatgagcagtatttcagag
agccgtcaggaggccagcccgtcccctaacacaggttcatactcaggaaagcagaagctt
cagagcaaagctagcagcaggaaatcaaagtctccgaacccaggccaggcatactctgcc
ggagagaggccctcttctgtgtcctccgttcattcggagggtgattaccacagacaggct
cccacctgggcttgggaagacagaccgtcgtccacaggttccatgcagttcccctataac
cccctgaccatgcgcatgctcagtagtacccctcccacctccatggcctgcccatctccc
tccatgcagtcccagcagcagccacagggtggtgcctccggccctgtggcaccgacgcgc
gcatgggagagagagccgccgctgttgtcagagcagtacgagaccctctcggacagcgac
gactga
DBGET
integrated database retrieval system
