Ctenopharyngodon idella (grass carp): 127513703
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Entry
127513703 CDS
T08802
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
cide04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127513703
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127513703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127513703
03009 Ribosome biogenesis [BR:
cide03009
]
127513703
04131 Membrane trafficking [BR:
cide04131
]
127513703
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127513703
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127513703
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127513703
Membrane trafficking [BR:
cide04131
]
SNARE
SNARE associated proteins
Others
127513703
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127513703
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127513703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
127513703
NCBI-ProteinID:
XP_051751747
LinkDB
All DBs
Position
5:complement(20147896..20158943)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
SGPSQGSSGGGGGTVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatccaaaaatgatgatctttccactgccattctgaagcagaag
aacaggccaaataggttgatcgttgatgaatccatcaatgaagacaacagtgttgtgtct
ctctctcaggcaaagatggatgagctccagctctttaggggggacacagtgctgttgaag
ggcaagaaacggagggagactgtttgcatcgtcctgtctgatgacacctgctctgatgaa
aaggttcgcatgaacagggtggtccgcaacaacctcagggtgcgccttggtgatgtcatc
agtattcagccatgtccagatgtgaagtatggaaagcgcattcatgttctgccaatcgat
gacacagtggaaggcatcacaggcaatctgtttgaggtctatctcaagccttacttcctg
gaggcttatcggccaatccgtaaaggtgatattttcctggtcagaggaggcatgcgtgct
gtggagttcaaagtggtggagactgaccccagcccgtactgtattgtggccccagacaca
gtgatccactgtgagggggaacctatcaagagagaggatgaggaagagtctttgaatgag
gtgggttatgatgacattggaggggtcaggaaacagctcgcccaaatcaaagaaatggtg
gagctgcctctgagacacccagctctcttcaaggctattggagtgaagcctccccgtggc
attctgctgtacggaccccctggaactggaaagactctcatagctcgtgctgtggcaaat
gaaactggagcattcttcttcctcatcaatggccctgagatcatgagtaaactggcaggt
gaatctgagagcaatttgcgcaaagcttttgaggaagcagagaagaatgcaccagccatc
atctttattgatgaactcgatgccattgcacccaaaagagagaagactcatggtgaggtg
gagaggcgcattgtgtctcagctgctcactttgatggatggactgaagcaaagggctcat
gtcatcgtcatggcagccactaacagacccaacagcattgacccagctctcaggcgattc
ggtcgctttgacagagaggtggacatcggcattccagatgctactggaagacttgagata
cttcagattcacaccaagaacatgaagcttgctgatgatgttgatctggagcaggtggcg
aatgaaacccatggccatgtgggtgctgatctggccgccctttgctcagaggctgctctg
caagccatccgtaagaaaatggacctcattgatctggaggatgagaccatcgacgcagag
gttatgaactccttggctgttacaatggatgacttcaggtgggctcttagccagagcaac
ccctctgccctgagagagaccgtggtggaggtgcccaacatctcctgggaggatattggt
ggccttgaagatgtcaagagagagctgcaggagttggtgcagtacccagtggaacatcca
gacaaattccttaagtttggcatgaccccatccaagggtgtgctgttctatggaccgcca
ggttgtggtaaaaccctactggctaaggccattgccaatgagtgccaggccaacttcatc
tcaatcaagggcccagaactgctcactatgtggtttggagaatcagaggctaatgtccgt
gaaatcttcgataaggctcgtcaagctgctccttgtgtgctcttctttgatgaattggac
tcaattgctaaagctcgtggtggaaatgttggtgacggtggtggagcagctgacagagtt
attaaccagatcctcacagaaatggatggtatgtccagcaagaagaacgtctttatcatt
ggggccaccaacagaccagacatcattgaccctgccatccttaggcctggtcgactggac
cagctcatctacatcccactgcctgacgagaagtctcgcatttccattctcaaagctaac
ctcaggaagtctccaatttcaaaggacgtggacctggacttcttggccaaaatgaccaat
ggcttttcaggtgctgacttgactgaaatctgtcagagagcctgtaaactggccatccgt
gagtccattgagaacgagatcagacgggaacgtgagcggcagaccaacccttctgcaatg
gaagtggaggaggatgaccctgtgcctgagataaggaaggaccatttcgaggaggctatg
cgctttgcccgccgctccgtcagtgataacgacatccgcaaatacgagatgttcgcacag
accctgcaacaaagcagaggctttggcagtttcagattcccatccagtaaccaaggagga
agtggaccaagtcagggctcttctggtggtggcggaggcacagtcttcaatgaggacaac
gatgatgatctttatggataa
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