Ctenopharyngodon idella (grass carp): 127513821
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Entry
127513821 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127513821
04020 Calcium signaling pathway
127513821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127513821
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127513821
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127513821
NCBI-ProteinID:
XP_051751848
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All DBs
Position
6:12561178..12643169
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AA seq
2097 aa
AA seq
DB search
MTSEEEGPAAVGAEPHVDLHASPGWDGLVEEEAEPAEQEEAGPAEQAQEVADDVSSESSA
LVVPYPELAPIVFFCLKQTTCPRNWCIRMVSSPWFERVSMMVILLNCVTLGMYQPCENID
CSSDRCQILQAFDAFIYIFFALEMVVKMVALGIFGRRCYMGDTWNRLDFFIVMAGVVEYS
LDLQNINLTAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGII
GVQLWAGLLRNRCYPEENFTLSTGVALPAPYYSPNEDDERPFICSLPQDNGIMSCGDVPA
RRVAGHQCCLDVDDLLHHQALGLVTEPFLNASVFVPGLCVNWNRYYTRCHTGHRNPHKGA
INFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVI
ATQFSETKQREHQLMQEQRAACLSSSTLASLAEPGDCYEEIFQLVCHVLRKARRHTAAFF
RTLCCKPPEQTHEKTNANGGEKSLQQHDGAAPAASAANQETEEDAAEETDRCQREKGACR
GWSRELWMEMRVKLWGIVESKYFNRGIMVAILINTISMGIEHHEQPDELTNVLEICNIVF
TSMFALEMILKITAFGCFNYLRNPYNIFDGIIVIISVCEIVGQSDGGLSVLRTFRLLRVL
KLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTDAGDTVP
DRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAALYFVALMTFGNYVLFNLLVA
ILVEGFQAEGDASRSYSDDDERSSSNGSQQHKDSLTFSDPKLPSLTPNGHLELEPLAEEK
TRTSFSEENHRRRTICLGRRSSSLRHSRSSNYHHWGRPPAQPSWSRRCSWNSAGRSASGL
RAGGGIGGSLRVRSVHSHPAEHESLLPHPPFLSRRDRRAVSLELPEILQRPALVRKKSVS
AEHQDCNGKGPGPQGPLLGEIYPQLNARKDKKNLEEDTEYSLCFRIQKMMEVYRPDWCEK
REDWSIYLFSPQNKFRLMCQTIIAHKLFDYVVLAFIFLNCITVALERPRIHQGSLERVFL
TISNYVFTAIFVAEMTVKVVSKGLYLGDRAYLRSSWNVLDGFLVFVSLIDIVVSMAGGAK
ILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQ
LFKGKFYYCVGLDVKNVTNKSDCLSASYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIM
YHGLDAVGIDQQPVINHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEA
RRREEKRLKRLEKRRRKAQRLPYYASYGRVRLMIHSFCTSHYLDLFITLIICINVVTMSL
EHYSQPQSLETALKYCNYFFSSTFVVEATLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGI
TLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLF
VLLFFIYAALGVELFGELVCNVEYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKD
TLRECPPGDSYSCNSSLQIISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAE
MDAEIEMELAQGGLCCLGRLXTASPGLMGARGPRGAAGTDTRPQAAVHTSQSGHTPRRTA
PDTLQQRRLYSPAQENQWLESVSLLMKDSLDGEMQMIDNLSGSVFHHYCSPPIRQDGRSQ
SGEIRLAEVEQTSLMSEQLSDKSSSPALPDDISLDDRSVYQLLDRDCKEEQGSGDLSTEE
VVSRSVLPQSEVSSPGRHRREVRRETGHRLQSPAHAGDVSGGDSRTSSPLFHLPAEFFHP
TTAAIPQGSPATGAAQPGSRHASPASWASLRSPGANSRVMCSQTSHSNSSLATGSSVGSL
QTTLEEGVSPPGDPTLPLICRTHVPPPELTQRPPAPQTAFNLQATRGRQRSQGRYSDCTN
PNRIRQDSTEPSDEDMGVRPGGLSQAGNPEQLSDNLSSFSLTSLHPPDSLAPPLAKKCNS
TGSLVQGSLAVQNKDGRCFYGFNPWTEATSEETEREASPAGAKTCSQTVGSSCRKNR
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagaggaggaggggcctgctgctgtgggggcggagccacacgtggacctgcat
gcctctcctggctgggatgggcttgttgaagaagaggcggagcctgctgagcaggaggag
gcggggccggcggagcaggcgcaggaagtggctgatgatgtcagcagtgagtcgagcgct
ctggtcgtcccgtacccagagttggcgcccatcgtcttcttctgcctcaaacagaccacg
tgtcctcgcaactggtgcatccggatggtgtccagcccgtggttcgagcgggtcagtatg
atggtgatcctgctgaactgtgtgacgctgggaatgtaccagccctgcgagaacatcgac
tgctcctctgatcgctgtcagatcctgcaggcctttgacgccttcatctacatcttcttt
gcgctggagatggtggtgaagatggtggctctggggatcttcggccggcgctgttatatg
ggcgacacctggaacagactggacttcttcatcgtgatggccggggtggtggagtattct
ctggacctgcagaacatcaacctgacggccatccggacggtgagagtcctgcggccgctc
aaagccatcaacagagtccccagcatgaggatcctggtgaatctgctgttggacacactg
ccgatgttggggaacgtgctgctgctctgcttcttcgtcttcttcatcttcggcatcatc
ggcgtgcagctgtgggcggggcttctgcgcaaccgctgctacccggaggagaacttcacc
ctctcaacaggtgtggcacttcctgctccgtactactctcccaatgaggacgacgagagg
cccttcatctgctctctgccgcaggataatgggatcatgtcgtgcggtgacgtgccggcg
cggcgtgtggcgggacatcagtgctgtctggacgtggatgatctcctgcaccatcaggct
ctgggcctcgtgaccgagcccttcctcaacgccagcgtcttcgtacccgggctctgcgtg
aactggaaccggtactacacccgctgtcacactggacacagaaacccgcacaaaggagcc
atcaactttgacaacatcggatacgcctggatcgttatttttcaggttattactctggag
ggctgggtggaaatcatgtattacgtcatggatgctcactcattctacaacttcatctat
tttattctgctgattatagtgggctctttcttcatgataaacctgtgtttggtcgtcata
gcgactcagttttcggaaaccaaacagcgcgagcatcagctgatgcaggagcagcgagct
gcctgtctgtcctccagcacactggcctcgctggccgaacccggcgactgctacgaggag
atcttccagctcgtctgccacgtcctccgcaaggcgcgccgacacaccgctgcgttcttc
agaacgctctgctgcaaaccaccggagcagacgcacgagaaaacaaacgccaacggagga
gaaaagagcctccaacaacatgatggagccgcacctgccgcatcagcagccaatcaggag
acagaggaggatgcagcagaagagacagacaggtgtcagagggagaagggggcatgccgg
gggtggagccgagagctgtggatggagatgagggtcaaactgtggggcatcgtggagagt
aaatacttcaacagaggaatcatggtggccatcctcatcaacaccatcagcatgggcata
gagcaccatgagcagccagatgagctcactaatgttctggagatctgtaacatcgtcttc
accagtatgtttgctctggagatgatcctcaagatcacagcgttcggctgctttaattac
ctgcgcaatccgtataacatctttgatggaatcatcgttatcatcagtgtgtgtgagatc
gttggtcagtctgacggcggtctgtcggtgctccggacgttccggttgctgcgggttttg
aagctggttcggttcatgccggcgctgcgcagacagctggtggttctgatgaagactatg
gacaatgtggccacattctgcatgctgctgatgctcttcatcttcatcttcagtattctg
gggatgcatattttcggctgtaagttcagtctgaagaccgatgctggagacacagtccca
gacaggaagaactttgactctttgctctgggcgatcgtcactgtgtttcagatcctgacc
caggaggactggaatgtggtcctgtataacggcatggcctccacatctcctctggctgct
ctgtattttgtggctctgatgacgttcgggaactacgtgctgttcaacctgctggtggcc
attctggtggagggctttcaggctgagggtgatgccagtcgctcgtactctgatgatgat
gagagatcttcctctaatggaagccaacagcataaagactcgctcacgttctccgatccg
aagctgccctctctcactcctaacgggcatctggagctggagccgctggccgaggagaag
accaggaccagcttctctgaggaaaaccaccggaggaggacaatctgcctgggcaggaga
tcctcatctctacgccacagccgcagttccaattaccaccactgggggcgtcctcccgct
cagccatcctggagccgccggtgtagctggaacagtgcaggccgttctgccagtggcctg
agggccggagggggcatcgggggtagtttacgggtccgcagtgttcactcgcaccccgcg
gaacatgagtctctcctgccccacccacccttcctgtcgcgcagagaccgccgcgctgtc
tcactggagctgcctgagatcctgcagcgccccgctctggtcaggaagaagagcgtgtct
gcggaacaccaggactgtaatgggaagggcccgggccctcaggggccgctgctgggagag
atttatccccagctcaacgcacgcaaagacaagaaaaacctggaggaagacacagaatat
agcctgtgtttccgtatccagaagatgatggaggtttatcgtccagactggtgtgagaag
agagaggattggtccatttacttattttcgccccagaacaagtttcgtctgatgtgtcag
actatcatcgctcataagctctttgactatgtggttcttgccttcatcttcctcaactgc
atcacagtggctctggagagacccagaatccatcagggcagtctggagcgagtcttcctc
accatctccaactatgttttcactgccatctttgtggccgagatgactgtcaaggtggtg
tctaagggtctgtatctgggcgatcgagcatatctgcgcagcagctggaatgttctggac
gggtttctcgtcttcgtgtctctgattgacatcgtggtgtcgatggcgggcggagccaag
atcctgggcgtgctgcgggtgctccgcctactgaggacgttacgcccactcagggtgatc
agtcgagctccgggtctgaagctggtggtggagactctgattacgtcactgaagcccatc
gggaacatcgtcctcatctgctgcgctttcttcatcatcttcggcatcctgggagttcag
ctcttcaaagggaagttctattactgtgtgggtttggatgtgaaaaatgtcaccaataaa
tccgactgtctgtctgccagttaccgctgggttcatcacaagtacaactttgacaatctg
gggcaggctctgatgtcactgtttgtgttggcgtctaaagatggatgggtaaatatcatg
taccacgggctggatgctgtcgggatcgaccagcagcccgtcatcaatcacaacccctgg
atgctgctctacttcatctccttcctgctgatcgtcagtttcttcgtgttgaacatgttt
gtcggtgtggtggtggagaacttccacaagtgccgtcagcatcaggaggtggaggaggca
cggcggcgggaggagaagcggctgaagcgcttggagaagaggagacgcaaggcccagcgg
ctgccgtattacgcctcgtacggccgcgttcgtctgatgattcactcgttctgcaccagt
cactatctggacctcttcatcaccctcatcatctgcatcaatgtggtcaccatgagcctg
gagcactacagccaaccacagtcgttggagacggcgctgaaatactgcaactacttcttc
agctccacgtttgtggtggaggccacgctgaagctggtcgcgttcggcttcagacgcttc
tttaaagacagatggaatcagttggatctggcgatcgttctgttgtctgtgatgggaatc
actctggaggagatcgagataaacgcttcacttcccatcaatcccaccatcatccgcatc
atgagggtcctgcgtatcgcccgcgttctgaaattattgaagatggccacaggaatgaga
gcgctgctcgacaccgtggtgcaggctttacctcaggtggggaatctgggtttgctcttc
gttctgttgttcttcatttacgcggcgctcggagtcgagctgtttggagaactggtgtgt
aacgttgaatacccgtgtgaagggatgagccgtcacgccacgtttgaaaacttcggcatg
gcgttcctcaccctcttccaggtttctacaggagacaactggaacggcatcatgaaggac
acgctgcgcgagtgtccgccgggcgacagctactcgtgtaactccagcctgcagatcatc
tcgcccatgtactttgtgagcttcgtgctgacggctcagttcgtcctgattaacgtggtg
gtggccgtgctgatgaaacacctggacgactccaataaggaagcgcaggaggacgcggag
atggacgcggagatcgagatggagctggcgcagggcgggctgtgctgcctgggccgtctg
nngaccgcctcgccggggctgatgggagcgagagggccgcggggagctgcgggaacagac
acacggccacaggctgcggttcacacgagccagagcggacacacgccgcgcagaaccgca
ccggacacactccagcagaggagactgtactcgccggcacaggagaaccagtggctggag
agcgtctctctgctgatgaaggactctctggatggagaaatgcagatgattgataatctg
tcagggtcagtgttccatcattactgctctccaccaatcagacaagacggcaggagccaa
tcaggagagatccggctggcagaggtcgagcaaacgtctctgatgtcggagcagctgtca
gataaatcctcatcaccggcgctgcctgatgacatcagcctggacgaccgcagcgtgtac
cagctgctggacagagactgtaaggaggagcagggcagcggtgatctgagcacagaagag
gtcgtgagcagaagcgttcttcctcagagcgaggtatccagcccagggagacacagacgg
gaagtgcggcgtgagacgggtcatcggctccagtctccagctcatgccggagatgttagt
ggaggagacagccggacatcttcacctctctttcatctcccagcggagttcttccacccc
accaccgctgcgatcccccagggcagcccagccaccggagcggcccagccgggctccaga
catgcatctccagcctcgtgggcttctctaaggtccccaggggccaacagcagggtcatg
tgctcacagacgtcccacagtaactcctctctggccacgggcagttccgtgggcagcctg
cagaccacactggaggagggcgtctccccgccaggagatccgaccctgcctttgatctgc
agaacccacgttccccctccagaactcactcagagacctcctgctccacagactgctttc
aacctccaggccaccagggggcggcaaaggagtcagggcagatacagtgactgcacaaac
cctaaccggatccgacaggactccacagaaccctccgatgaggacatgggagttaggcct
ggaggactcagtcaggctggtaatcctgaacagttgtcggataacctgagtagcttctct
ctgacctctctgcacccgcccgactcgctggcgccgccgctggccaagaagtgcaacagc
actgggagcttagtacaggggagcctagcggtccagaataaagacggaaggtgcttttac
ggattcaacccctggactgaagcgacaagtgaggaaacggagagggaggcgtcacccgct
ggtgccaagacgtgcagccagactgtgggttccagctgccgtaagaacagatga
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integrated database retrieval system
