Ctenopharyngodon idella (grass carp): 127513863
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Entry
127513863 CDS
T08802
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127513863
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127513863
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127513863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127513863
NCBI-ProteinID:
XP_051751929
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All DBs
Position
6:complement(1363400..1374857)
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AA seq
666 aa
AA seq
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MRGSSSYGDRDRDRGRDRGPRFGSSRVVQPPPKKFGNPGDRLRKKKWDLDQLPKFEKNFY
SEHPEVHHMSQYDVEEYRKRKEITVRGSGCPKPVTNFHQAQFPQYVMEVLLQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYVQ
INIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTR
RMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDTGR
GGSGGGRMRYRGNNSSSNNPNLMYQDECDRRMRSATGGNKGSRSNNFSRDGRSGGSSRDD
RLSSSSYRDRSRDGRNNYNSAPSYNSGGGDQYQSYGGGGGGQYGSRGGGSHPGGGGSGGA
GGQDQAGPPQGMFGAPPPTPPQPGPGPQPLMAQQFPPPPQPVMGFMGPGPYPFASPPPPL
PPPPRK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagctcctcatatggagaccgagacagagatcgaggacgggacagagggcct
cgctttggatccagtcgagttgtccaacctccacctaagaagtttgggaatccaggagat
agactgaggaagaagaaatgggacctggaccagctgcccaaatttgagaagaatttctac
agtgaacatcccgaggttcatcacatgagtcagtatgatgttgaagaatatcgcaagaga
aaagagatcactgtcagaggctctggctgtccaaagcctgttaccaacttccatcaagct
caattccctcaatatgtgatggaagtgctgctgcagcagaactttaaagagcccactgct
atccaggctcaaggttttcctttggctctcagtggcagggacatggtgggcatcgctcag
actggctctggaaaaacactggcttatctgctgcctgccatagtgcacattaaccatcag
ccatacctagagagaggggatggccctatttgtcttgtgctggcacccacgcgtgaatta
gcccagcaggtgcagcaagtggcttatgactatggcaaatcatcccgaatcaagagtacc
tgtgtttatggtggagcccctaaaggtccacagatcagagatttagaaagaggtgttgaa
atctgcattgcgacacctggccgtctgatagacttcctggaggcaggaaaaaccaaccta
cgccgttgcacctacctggtgctagatgaggctgatcgtatgttggacatgggttttgaa
ccccaaatccgcaaaattgttgaccaaattagacctgacagacagactctcatgtggagt
gctacctggcctaaagaagtgcgtcagctggctgaagatttcctccatgactatgtccaa
atcaatataggagctctagaactaagcgcaaaccacaacatcctgcagatagtggatgtc
tgcatggaaaatgaaaaagacaacaagctgattcagctgatggaggaaatcatggctgaa
aaggagaacaaaaccatcatctttgttgagacaaagaaacgttgtgatgaactgactcgt
aggatgcgaagagatgggtggcctgcaatgtgtattcatggtgacaagagccaaccagag
agggactgggtactatcagagtttcgcagtggaaaagctccgattttgatcgccactgac
gttgcatcacggggtctggatgtggaggatgttaaatttgtcatcaactatgactatcca
aactcttctgaggattatgttcatcgcattggccgcacagctcgcagcaccaacaaaggt
acagcctacaccttcttcacacctggaaaccttcggcaggctcgtgatctggtcagggtt
cttgaggaggctagacaggccatcaaccccaaactactgcagctggtggacacaggtcgt
gggggaagtggaggtggaaggatgcgttaccgtggcaacaactcaagctcaaataacccc
aacttgatgtaccaggacgaatgtgatcgccgtatgcgctctgcaacggggggtaacaag
ggcagccgcagcaacaactttagccgtgatggaaggtcaggtgggagcagccgtgacgac
cgcttgtcctcgtcttcttacagagatcgcagtagggatggacgaaacaactacaactca
gcgccctcctacaacagtggaggtggtgaccaataccagagctatgggggcggaggaggg
gggcagtatggctccagagggggaggctcgcatccaggtgggggtggtagtgggggagcc
ggagggcaagatcaagctggacctccccaaggtatgtttggagcgccacctccaactcct
cctcagcctgggccaggtccgcaaccactcatggcacaacagttccctcctccaccacag
cctgtcatgggattcatgggtcctggcccatacccatttgcctcaccaccaccacccctt
cctccccctcccagaaagtag
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