Ctenopharyngodon idella (grass carp): 127513927
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Entry
127513927 CDS
T08802
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127513927
Membrane trafficking [BR:
cide04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127513927
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
Lpg0393_VPS9
RA_2
RA_3
FERM_f0
Motif
Other DBs
NCBI-GeneID:
127513927
NCBI-ProteinID:
XP_051752105
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All DBs
Position
6:6414617..6437438
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AA seq
918 aa
AA seq
DB search
MAMDSSFQLSRIDRSGSFLQLVDAFALSLGTLERQMVHATQEKDRDPVRDPDTSMFIEIE
GGMSTVCLQYPAFDGDGTSTSVSVLDKLIHTHPIWLLRSIDQQEATGILLQQPAGVFLVW
RSSVLQKKVLSFHMDGTSDSSVIHIPLKESQYTFSLEGSGISFADLFHLVAFYCISRDIL
PSTLKLPEAIHSAETLSDLHEVAQQGAAFWEYSVKRQQEPKGSLVQDRPSISLHDNFSDI
LLIEDQTCTPTGNLNASLPLTDTCSNAPEGKRSCSNSALSFINPVFLKTQQDLTGNAATV
IAKDTTAENGKFRPPPPPRPPPPRILVHTPALPPGPRTMPLSAGNTRLSQRPKSIAGSMG
SKHPSSKKPAPQPPPRPPQPPDIDSYRCTIALDDDTISRALSQASQTHTTLKPTNSNILQ
QWTGPEEKGRSSSGLSTSSSDSLDSPPHPLPLGLSQGMGQGLSTDDSSDEYDEEEEDYGV
GLERDLHLRLRSSRKTKRLLAVELVGAHPRSLVIPRALRGQFRKVRGVLNVLATPEKRIL
LRIIELSQDKGSYFGCLVQDYLSFVQENKNCHSSSQDLLQTLRQFMTQMKAYLIQSSEMN
PPIESYIPEDQIDPVLEKAMHKCVLKPLYGCLQSALHEFQVADGVWQRLQENLALAKAKQ
PHELGANAARPPDAYAIHRIRRKLRAMCSMYSPERKIMMLLKVCKLIYNIMQDNEVRMFG
ADDFLPMLTYVLVQCDMPQLDTEILYMMELIDPPLLHGEGGYYLTSAYGAMSLIKNFQEE
QAARILSSTARDTLHQWHQRRTLQRNLPSVDDFQNYMRVALQKADSGCTAKTLQVRPYTT
TEEVCRLCALKFRVSDPENYGLFLFTEDSSQQLAADTHPQWIKAELHSRPKRQHFYFVYR
TIADINCSTPVSSKQDIA
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggactcgtcttttcaactcagtcggatagacagaagtggtagctttcttcag
cttgtcgatgcgtttgcattgtcactgggtacgttggagcgacaaatggttcatgctacg
caggaaaaagacagagatccagtcagagatccagacacgtctatgttcatagagatagag
ggagggatgagcactgtgtgtctacagtatcctgcgtttgatggggatggtacaagcaca
agtgtgagtgtgttggacaaactgatacacacacaccccatctggcttctgcgttccatc
gaccagcaagaggccactggcatcctactgcagcaaccagctggggtgtttttggtctgg
aggtcatctgtcctgcaaaagaaggtcttgtcattccacatggatggtacctcagactcc
tctgtgattcacatccctttaaaggagagccagtacacattttctctggagggctcagga
attagttttgctgatctctttcatcttgtggccttttattgtattagcagagacattctg
ccgtctaccctgaagcttcctgaggcaatacactcagctgagaccctctcagatctgcat
gaggtggcccagcaaggggcagcgttctgggaatattctgtcaaaagacaacaagagcca
aagggttctctggttcaggacagaccgtcgatttctctgcacgacaacttctctgacatc
ttactgatagaggatcaaacctgtaccccaactgggaatctaaatgcctcactacctctg
actgacacctgctctaatgcccctgaaggcaaaagaagttgctccaacagtgctttgtct
tttatcaaccctgtcttcctcaaaacacagcaagatctcactggaaatgcagcaacagtg
attgcaaaagatacaaccgcagaaaacggaaaatttcgtccccctcctccaccaaggcca
cctccgcctcgcattttggttcatacccctgctttacccccaggaccgaggactatgcct
ttgagtgctggcaataccagattgagccagagacccaaatcgattgctggttccatggga
tccaaacaccccagctctaagaaacctgcacctcaacctccaccacgacctccacaaccg
ccagacattgacagctaccgttgcaccattgcgttagatgatgataccatctctagggcc
ctgtctcaagccagtcagacgcatacaactctcaaaccgaccaacagcaacattctgcag
caatggaccggaccagaagagaaagggcgaagctcaagtggtttgtccacttcctcatct
gactctttggattctcctccgcatcctctccctttgggcctatcccagggtatgggccaa
ggcctttccacagatgacagcagtgatgagtatgacgaagaggaggaagactatggtgtg
ggacttgaaagggacctgcatcttcgccttcgttcttcccgcaagacaaaaagactcctg
gcggttgaactagtgggggctcatccaagatctcttgttatcccacgagcactaaggggg
caattccgtaaggtccgaggtgtcctcaatgttctggctacacctgaaaaacgcatcttg
ctccggatcattgagttatcccaggacaaaggttcctactttggttgcctggtgcaggac
tatttgagctttgtgcaggagaacaaaaactgccactcatccagccaagatcttctgcag
acgctccggcagttcatgacccagatgaaggcttacctcatacagagctcagagatgaac
ccacccatagagtcttacataccggaggaccagattgatccggtgttggagaaggccatg
cataagtgtgtgctgaaacccctgtatggctgcttgcagtcagcactgcatgagttccag
gtggccgatggagtgtggcagaggctgcaggagaatctggccctggccaaggccaaacag
cctcacgagttgggagcgaatgcagcgcggccaccagacgcctacgccatccaccgcatc
cgcagaaaactcagagccatgtgcagcatgtactctcctgagaggaagattatgatgcta
ctgaaagtctgtaaactcatctacaatattatgcaagataatgaagtgaggatgttcgga
gcggatgatttcctgcccatgttgacatatgtgttggtccagtgtgacatgcctcagttg
gacactgagatcctgtatatgatggagctgatagatcccccattactgcatggagaagga
ggttattacctcaccagtgcatacggagcaatgtccctgattaagaacttccaggaagaa
caggctgcacggattctcagttctacagcacgcgacacactccaccagtggcaccagcgt
cgcacactgcagagaaacctgccctcagtggacgacttccagaattacatgcgcgtggct
ctgcagaaggcagatagcggctgcacggctaaaacccttcaggtgcggccctacaccaca
acggaagaggtgtgccgcctttgtgcacttaaattccgcgtgtctgatccggaaaactac
ggcctctttcttttcacagaggacagcagccagcaattggctgcagacacacacccacag
tggataaaggcagaattacacagtcgaccgaagcgtcaacacttttactttgtctacagg
acgatagccgatataaactgttccacgcctgtgtcttcaaagcaggacattgcctga
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