Ctenopharyngodon idella (grass carp): 127514013
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Entry
127514013 CDS
T08802
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127514013
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
127514013
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
CCDC47
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
127514013
NCBI-ProteinID:
XP_051752304
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All DBs
Position
6:24799016..24812142
Genome browser
AA seq
1220 aa
AA seq
DB search
MDDLFSPRRQLNSTQGEIRVGPSHQAKLPELQPPPAHGTESVTENEELVWAPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESQYDAAKALQCLVKKPV
PKLIEKCWSEDEVKRFIKGLRQYGKNFFKIRKELLPSKKTGELITFYYYWKKTPEAVASR
PHRQQRRQPVSRKVKTRNATAAANATSRTSSMELSSASEDDLDSEDSEQGGKGQACSHCL
STNSKDWHHGGRDNVLLCSSCHSHFSKHRRLPPVPKPADPPYLFKPVKEEEEGVRHGMKT
RRSRVPPHMSSLRSGRNRPTGSPDRGMSPTIEDVRPNGQSPRASSTAMATRASSSDIKNG
VAGKTNKKMKVEASIVKGVKRQRESAAPDVDEPERKNMKRPKNQDGPDSPSEGEGEGESS
DSRSANDDGSSDTKDIDQDNRSSSPSLASPLQANESDSDSPAPPPAPGPTPQTQPQQPAA
TPTTHGPSETPSSPQPSLLASSSAPSPGASTTTSKATSVEVSQEVPSPTAFRSGPRGPEA
PNSYSNSSSQQVQCPGQGQSFPVPPHYQHNPGQLQNPSSGASQPPGFASRLLHIQKESPL
PLLPPTAASQIKPPPTTPIPPSHKQPPHLSAPPPHFLQIHPNLPPPPALKPLASLPSQHL
PCSQPPPLHIIPQNHSAQPSVLTQSQSQQVKGHTSGAPPAAASSNPSLPQNRPAPESTAS
FPLYASPIPVPAHQPSTSSSASTPVGQAHIKEEPIDEEEECDSPPPPRRSPSPVPTVVDI
PSHASQSARFIKHLNRGYNSCSRTDLYFTPLASSKLAKKREEAAERSRREAELSARQGRE
RERERERERERERERERERERERERDSDKTSRASSSSHDGRIGEHLLAAHVQPGRPSFEP
PPPTTVAAVPPYLGPDTPALRTLSEYARPHVMSPSNRNHPFFMPLGPGEHLLAYHMPGLY
AADPALRERELRELREREIRERMKPGYEVKPPDLENPLHPSANPMEHFARHGALPLPHVA
GPHPFAQFHPAMERNVGGPPRPEISYAERLTAERLHAERMASVAAGDPVARLQMLNVTPH
HHQHSHIHSHLHLHQQDPLNQGQGPHPLVDPLAAGPPLARFPYPPGAISNPLLSELPHEH
EMLRHPLFGTPFPRELPGPLAPMSAAHQLQAMQAQSAELQRLALEQQWLHGHAHAHLHSA
PLPSQEDYYSRLKKEGDKQS
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttgttcagtccgcgaaggcagctgaacagcacacaaggagagattcgagtg
ggaccaagtcatcaggccaagctacctgaattacagccgccacctgctcatggaacagag
tctgtcacagaaaatgaggagctggtgtgggcacctggggtcaatgactgtgaccttctc
atgtacctacgggctgccaggagcatggcagcttttgcagggatgtgtgatggaggttca
acggaggatggttgtcttgcagcttcacgggatgataccacattgaatgctttaaatacg
ctccatgaaagccaatatgatgcagccaaagccctgcagtgtctggtgaagaaaccagtt
ccaaaactcatcgagaaatgctggtcagaagatgaagtgaaacggtttatcaaaggtctt
agacagtatggcaaaaacttctttaagatccgtaaggagctactgcctagtaagaaaacg
ggtgagctgataacattctactactactggaagaaaactcctgaagctgtggcgtcacga
cctcatcggcagcaaagaaggcagccggtgtctcgcaaagtgaaaactcgcaacgcgaca
gctgcagccaatgcaacatctcgcacttcttccatggagctcagttcagccagtgaagat
gatctggacagcgaggatagtgagcaaggcggcaaaggtcaagcctgcagtcactgtcta
tccactaactccaaagactggcatcatggagggagagacaatgtcttgttgtgctctagt
tgccactctcacttcagcaagcatcggcgcctgccacctgttcccaaaccagcagatcca
ccctacctcttcaaacctgtcaaagaagaggaagagggtgtcagacatgggatgaagacc
cgccggagccgggtgccaccacatatgtcatctcttcgaagtgggcgcaacagaccaacc
ggaagtcccgacaggggcatgtctcccaccatcgaggatgtgcgacctaatggacagtct
cccagagccagttccactgctatggcaactagggcttccagttctgatatcaagaatgga
gtggctgggaagaccaacaagaagatgaaagtagaggcatctatagtaaagggtgttaaa
agacagagagagtcagctgctccagatgttgatgaaccggaaaggaaaaacatgaaacga
cccaagaatcaggatggtcccgattctccatcagaaggtgagggtgaaggcgagagctcc
gatagccgcagtgccaatgatgatggcagcagcgacactaaagacatcgatcaggacaac
cgcagttcctcccccagcctggccagtcccctgcaggctaacgaaagtgactctgactcc
ccagcaccgccccctgcacctggcccaaccccacaaacccagccccagcagcctgctgcg
acccccacaacacatggcccctctgaaacaccatcatctcctcagccctctctgcttgca
tcctcatctgcaccttcacctggagcttctaccaccacctcgaaggcaacatccgtagag
gtttcccaggaggttccatctccaaccgctttcagaagtggtcccaggggacctgaagca
cccaactcttattcaaactcctcgtctcagcaggtgcagtgtccagggcaggggcagtca
ttccctgtgccgccccattatcagcacaatccaggtcagctgcagaatccttcatctggg
gccagtcagccacctgggtttgcttccagactgctgcacattcaaaaagaaagtcctctt
cctcttcttcctccaacagcagcatcccaaatcaagccccctccgaccactccaattcca
ccttctcacaagcagccccctcacctttctgcacctccaccccatttcctgcagatccac
cccaatttgcctccacctcctgctctaaaacctcttgcgtccttgccctcacagcacttg
ccttgttcccagcctcctccccttcatataattccacaaaatcactccgctcagccttcc
gttctgactcagtcgcagagccagcaggtcaaaggtcacaccagtggtgcccctccggct
gcagctagttctaacccatcgctcccccaaaatcgtcctgctcccgagtccactgcttca
ttccctctttacgcttctcccatccctgtccctgcccatcagccctccacttcctcctca
gcaagcactcctgttggacaggctcatatcaaagaggagccaattgacgaggaggaggag
tgcgatagcccgcctccccctcgtagaagtccctcacctgtaccgacagttgttgacata
cctagccatgcaagtcagtcagcaagatttatcaaacacctcaaccgaggctacaactcc
tgctctcgcacagacctgtacttcacccccttggcctcctcaaaactggctaaaaaacga
gaggaagctgccgaaagatccagaagagaagcagaactgagcgctcgacagggacgggag
agagaaagagaaagagagcgtgagagggagagggagagggagagggaaagagagagggaa
cgagaaagggagagagactctgataaaacctctcgtgcttcaagctcatcccatgatggc
cgcataggcgagcatctgcttgctgcccacgtgcaacccggccgtccatcattcgaacca
cctccacccaccaccgtagctgctgttccaccatatcttggccctgacactccagccctt
cgcacgctcagcgagtacgcccgtcctcacgtcatgtcaccctccaaccgcaaccatcct
ttcttcatgcctcttgggcctggtgagcacctgttagcttatcacatgccggggctctac
gcagcagacccagcccttcgagagcgagagcttcgtgagcttcgagagagagagatccga
gaacgaatgaagcccggatatgaggtgaagccaccggatctggaaaacccacttcatcca
tcggcaaatcctatggagcattttgcgcgccatggtgccctgcctctgcctcatgtggct
gggcctcacccctttgcccaattccacccagccatggagcgcaacgtagggggacctcct
cggccggaaatcagctacgctgagcgtttgactgctgaacggctccatgctgaaaggatg
gcctctgttgcagcaggtgaccctgttgcacggctacagatgctcaatgttactccacat
caccaccaacactcacacatacactcccatcttcatctacaccaacaggaccctctcaac
caaggacaagggcctcatcctctggtggacccattggctgctggcccccctctggcacga
ttcccttacccacccggtgccatctccaaccctctactcagtgagttaccccatgagcac
gaaatgctccgccaccctctgtttggaacaccattccctagagaattaccaggacccctg
gctccgatgtcggctgcgcatcagttgcaggcgatgcaggcacagtcggcagagctgcag
aggctggcactggagcagcagtggctacatggacatgcacacgcacacttacatagtgct
cctctccctagccaggaagactactacagccgtctgaagaaagagggagacaagcagtcc
tga
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