KEGG   Ctenopharyngodon idella (grass carp): 127514101
Entry
127514101         CDS       T08802                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    127514101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127514101
   03036 Chromosome and associated proteins [BR:cide03036]
    127514101
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     127514101
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     127514101
    COMPASS/SET1 complex (yeast)
     127514101
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WD40_RFWD3 WD_LRWD1 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N KNTC1_N Beta-prop_HPS5 PQQ_2 VPS8_N MinC_C
Other DBs
NCBI-GeneID: 127514101
NCBI-ProteinID: XP_051752485
LinkDB
Position
6:25268575..25272657
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKG
VILEASFTPDSQFIMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaactcacagacaatgtgctgcggagttttagggttgcgaaggttttccgagagaat
tcggacaaaatcaactgctttgacttcagttcaaacggcgaaactgtaatatcgagtagc
gacgatgactcgattgtcttatacgattgccaggagggaaaacccaaacggacgctttac
agtaagaagtatggtgtggatctcatcagatacacccatgccgccaacactgtcgtctac
agctctaacaagattgatgatactatacgatacctgtccctacatgacaataagtacatt
cgctactttcctggacacaataagagggttgttgctctgtctatgtctcctgttgatgac
acattcatttctggctcacttgataaaactattcgtctgtgggaccttcgctcacctaac
tgtcagggcctcatgcacctgcaagggaaacctgtgtgttcttttgatcctgaggggttg
atttttgctgcgggagtgaactccgagatggtcaaactttatgatctacggtcctttgat
aagggcccattcgccacatttaaactacaatatgagcgaacatgtgagtggacgggtctc
aagttcagcaatgacggaaagctcattctggtctccaccaatggaggaacgctcagagtg
ctggatgctttcaaaggagccgttctccactcgtttgggggctataacaacagtaaaggt
gtcattctggaggcttctttcacaccagactctcagttcatcatgatcggatcagaagat
gggaagatccatgtgtggaatgctgagagtgggatgaaagtagcacttcttgatgggaag
cacactggtcctgtcacctgtctgcagtttaaccccaaattcatgacctttgccagtgcc
tgctctaacatggcgttctggttacccacgattgatgactga

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