Ctenopharyngodon idella (grass carp): 127514140
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Entry
127514140 CDS
T08802
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127514140
Membrane trafficking [BR:
cide04131
]
Endosome - Lysosome transport
Others
Others
127514140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
Neurobeachin
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
GRAM
WD40_MABP1-WDR62_2nd
DUF5711
Motif
Other DBs
NCBI-GeneID:
127514140
NCBI-ProteinID:
XP_051752553
LinkDB
All DBs
Position
6:complement(6192768..6261322)
Genome browser
AA seq
2730 aa
AA seq
DB search
MASTERLYEVWMLYCNKKDPDYLKLWLEIFIGSYERCLDVDFEKPPTRLEETPPVMTLLP
DNILQVLRLQLLQCVQKASEGLEPEQQTLALLLLKFLIVICRNLSNVEEIGACSYINHII
TMTTLYIQQLKSKTKEKELADQTQAEEFVRHALAFCESLYDPYHNWRHRIHGQQLSTVER
SRQKFKAAPLTVEFVPFFYQCFQESEHLKDSLKCCLLHLFGAIVAGGQRNALLAISPATM
EVLLGVLGTGECLSGGGDGEDWDSEAPDRKALLTLGCLREVVHRLLASSSDQRQVEISSV
LESYFKLLNSDPAATAQVKGRPTPPHSRHWESRFVALQVNMLETIQDMFECTDRPVLQAI
FLNSNCFEHLTRLLQNSKLVNARCTAADKDQKDLTNRLLTGESEIQVFQGRLDSLAVATI
KTLSTVMHKSPAAKEVFKERIGYTHLYEVLVSLGQPSRHLLKELMNMAVEGEHSSVGLLG
ISNVDPLLLLIQWLPELDSAELQIFTADWLRRICGLNRRTRATCVNSSMTVRLLSTLERH
ERLHRACAESLVGLLGSLGSQSLSSFELQHLLRLLRQDEPGCAHPYVGPVLRSLLGMVRK
QGLESAMQYFDLSPPMAGISVPTILRWPGYAFSFFAWLSLDQDQLGLPSKGEKRKQLYSF
FTPGGTGFEAFISSAGVLVVAVCTKKEYVTVMLPDYCFCDSLWHSIGVVHVPGKRPFGQS
LVYIFVDGQQKLSAPLKYPTMTEAFTSCCIGSAGHRTTTPPPSQIPDPPFSGGNSSGRTS
FGAILPGWGGLLGTKPESVTKLISAGTQDSEWGSPTSLQGQLGSVMVFHEPLQASHVKAL
CSAGPNCISPFKSQEAELGDLAPKLLLHYSPKACRNPICLDLSPNMLHGRLTGNKVVNWD
IKDMINCVGGLPVLLPVLEQLTLLTPDLHHVDHSGSEYISPDSATPAEGDWVILPTNRAS
EARLEKNLVATFLLVIKHFLQRHPINQETLLHSHGVATLGALLQKLPAFLVDVSVLVAVQ
LLIEQMTYEKNSHLLQQLHTHLLFNFSIWNQGDFPLRIGHIQYMSTVIKDSRKQFRKKYG
VQFLLDTIRLYYGSGSKDADLSEDDIKTIRASLCGLLKYYISKGTTQDEIQSILGYIAAI
GDEEQLCGILELLLTLLQTSAARDQLFLLLFEPGAADSCYALLLNNKHSDRLRELVFKVF
ERMLKCDRVYEKSKQRLRLRDVGYSGLSLLFSDMHLTSTLIKCLLHQVLSTDTVVNYKDL
MAVVQLTHKAGPSVRLTACKRLYALLQSQQDAALQISKQMCWQGTLMRLLVRSPGSDGGS
SSGRGDASSLGSFELNRSTGANRLEPPLERRTIGDSVGRLNEERDSVSDSRSIDSLDNGD
LMSLSETPGDAPTPKAWGGKVLSLDLSHVHLFDHGDSGSQTPGSMPSTPSPLENAKPFPG
ASSLNDDNFLFSDNVSLGESFNSERTEEELARLVLEIVLCVMWRGVEGSDDAAWLERGQV
FSALTKLGTANELLLPVDHIKLSLMERMLEWAVTDNREATTATLPQHTENAVRLLHMVQD
FLQAEGLVNPALWTEKVLEETVTLMDGLMVWYASGMQWLQLSQVGLRLLLGFMAQEDPQV
CAMATAKLNGILQTKTVDSQDEACYLLGRVEGILRRSVGEERTEETYSFLVPLLRTLLSK
VHKLLYMELHLPSLPDTNGSPSFFEDFQLYCSSPEWRVYLDKYIIPYMKQYEIETFSQGH
ENMALFWKDCYEAFMLNLHRRDRERGESKIRFQEQFVEPFSRRGRQENLRYNSMLKQIHT
QNSAILRQWRAARRGLFCERGPWVDKQQKDIRWKLSSAENYSRMRLKLVRNYNFDPHREA
SALRDNLGVQHQQVNAESLLLEAVKQVKVSDLEDDILELLEEDPASANQADSEEAGQKEK
LVISEDCELVTVVDVYPGRLELTTQHIYFYDSSAEKEEGVGQDFKWPLSQIREIHLRRYN
LRRSALEIFLIDQTNYFLNFKKEVRNKVYSRMLLLRSLSLHATHSPQELLKASGLTQVTA
DKWVNREISNFDYLMQLNTIAGRTYNDLAQYPVFPWILSDYTSEELDLSDPRVFRDLSKP
VAVLNERNAKAVREKYESFEDPTGTIDRFHYGTHYSNAAGVMHYLIRVEPFTSLHIQLQS
GRFDCADRQFHSIPATWQTLMDNPNDVKELIPEFFYFPEFLENQNGFDLGRLQISKERVN
DVILPKWAKSPEDFIYKHRKALESEYVSAHLHEWIDLIFGYKQRGPAAVEALNVFYYCTY
EGAVDLDAITDEKERKALEGMISNFGQTPCQLLKEPHPVRLSLEELEKKRTRLDSSPLNI
FEHLTELKSFFIEGISDNVPLVKAVVPKNQSHSFISQGSPDTLVTLSHNCLMGTHGWLPY
DKNISNYFTFIKDPTVASPKTQRFLSGPFSPGVEVTAHLFVVSHDGKLLFSGGHWDNSLR
VTSLVKGKTVGQHIRHMDIITCLATDHFGIHLISGSRDTTCMVWQVLQQGGAPVGLSSKP
VQVLYGHTDEVVSVSISTELDMAVSGSRDGTVMIHTVRRGQYMRCLRPPCESSLPMSIMH
LAVSWEGHLVVHTCIEGKATLKDKNALHLYSVNGKHLCSTPLKEQVTDMCVSGEHVVIGS
EQGFLSVRDLYSLTLCVSPMAMRVPIRCVSVTKEQSHVLVGLNDGKLIVVGVGKPAEMRS
GQITRKLWGSSKRLTQISSGETEYHTQEQP
NT seq
8193 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaccgagagactgtatgaggtttggatgctgtactgcaataagaaggacccg
gactatctgaaactctggttggagatcttcatcggctcctatgagagatgcctggatgtg
gatttcgagaaaccgccaaccaggttggaggagacgccccccgtcatgacgctgctccct
gataacatcctgcaggtgctgcgtctgcagctgctacagtgtgtgcagaaagcatctgag
gggctggagcccgagcagcagacgttagccctcctgctcctcaagttcctcatcgtcatc
tgcaggaacctgtcaaatgtggaggagattggcgcctgttcctacataaaccacatcatc
accatgacgacgctttatatccaacagctgaagagtaagacaaaagagaaggagctggct
gatcagacacaagccgaggagtttgtccgtcacgctttggccttctgtgagagtctgtat
gatccctatcacaactggaggcatcgcattcacggacagcagctcagtactgtggaaaga
agcagacagaaatttaaagctgcaccgcttactgtagagtttgtgcccttcttctaccaa
tgttttcaggagagtgagcacctgaaggacagtcttaaatgttgccttttgcacctgttt
ggagccatcgtcgcgggtggacagcgtaacgctctgctggccatctcgccggccacaatg
gaggtgctgctgggagtgttgggtacaggcgagtgtctgagcggaggtggagatggggag
gattgggacagcgaggctccagacaggaaggccctgttgacgttgggctgtttgagggag
gtggtgcaccggctcctggccagcagctccgatcagagacaggtggagataagctccgtg
ctggagagctacttcaaactactcaactcggaccccgccgccacagcgcaggtcaaaggt
cgtccgacaccaccccactctcggcactgggagagccgctttgtggcgttacaggtgaac
atgctcgaaaccattcaggatatgtttgaatgcaccgaccggccagttctgcaggccatc
tttctcaacagtaactgctttgagcatctgacccgactcttgcagaacagtaagctggtt
aatgctaggtgcacagctgcagacaaggaccagaaagatttaaccaacaggttactgaca
ggagagagtgagattcaggtgttccaagggaggcttgactctcttgccgtggcaacaatc
aaaactctctcgacagtgatgcacaagtcacctgctgcaaaggaagtgtttaaggagcgg
attggctacactcacctgtatgaagtgttggtgtcactgggtcagccgtccagacacctg
ctgaaggaactcatgaatatggctgttgaaggtgaacattcctccgtaggcctcctgggc
atcagtaacgtggaccctctcctgctcctgatccagtggcttccagagctggactctgcc
gagctgcagatcttcactgctgactggctccgccggatctgcggtctgaaccggcggacg
cgagccacctgtgtcaactcctcgatgactgtcagattgctgtcgactctggagaggcat
gagcggctacaccgggcctgtgccgagagtctggtggggctgttgggttctttaggcagt
caatcactgagttcctttgagctccagcatctactgagactcctgcggcaggacgaaccg
ggctgtgctcacccgtacgtgggtccggtattgcgttctctcctggggatggtgcgcaaa
cagggcctggagagcgccatgcagtactttgatctgtcaccgcccatggctggcatttcc
gtgccgaccatcctccgttggccaggctacgctttcagcttctttgcttggctgtcattg
gaccaagatcaactgggcctgcctagtaaaggagagaagaggaaacagttatatagtttt
ttcaccccgggtggcactgggtttgaggcctttatcagttcagctggagtgcttgtggtt
gcggtgtgcactaagaaagaatacgtcaccgtcatgctgcctgactactgcttctgtgat
tcactctggcacagcattggtgtagttcatgtgccggggaagaggccttttggccagagt
ctggtttacatctttgttgatggacagcagaaactatcagcacctttaaaatacccaacc
atgactgaggcctttacgtcatgctgtatcggttcagcgggtcaccgcaccacgacccca
cctccctctcaaatcccagatcctcctttttccggaggtaattcctctggacgcacgtct
ttcggcgctatcctcccgggctggggcgggctgctagggaccaaacctgagtctgtcact
aaactgatttccgccgggactcaggacagcgagtgggggagtcccacctcactgcaaggg
cagctgggaagtgtcatggtcttccacgagcccctccaagccagtcatgtcaaagccctc
tgtagcgcaggaccaaactgtatttctccctttaaaagccaagaagctgaacttggagac
ttggcacctaaacttctgctacactattctccaaaggcatgtaggaacccaatttgtctg
gatttgtctcctaatatgctgcatggtcgcctgacaggaaataaagtggtcaactgggat
atcaaagacatgatcaactgtgttggagggcttcctgtgttacttccagtcttggaacag
ttgactttgttaacccctgatttacatcacgttgaccattcagggtcagagtatatcagc
cctgactcagccacacccgctgaaggagactgggtcatactgcctacaaacagggcgtca
gaggccagactggagaagaatctcgtggcgacgttcttgctggtgatcaagcatttcctg
cagcggcatcccataaaccaggaaacacttctgcactcacatggtgtggccacattagga
gctctgcttcagaagttgccagcgttcctggtggacgtgagcgtgttagtggcggttcag
ctgttgattgaacagatgacgtatgagaagaactcgcatctcctgcagcagctccacaca
cacctgctgttcaacttcagcatctggaaccaaggagatttccctttgcgcatcggtcac
atccagtacatgtccaccgtcatcaaagacagcaggaagcagttcaggaagaaatatgga
gtgcagttcctgctggatacaattcgcctttactatggttctggaagtaaagatgcagat
ctgagtgaggatgacattaagacaatcagagcatctctctgtggccttctgaagtattac
atcagcaagggtaccacccaagatgagatccagagcattctgggatacattgctgccatt
ggagatgaggaacagctgtgtgggatcttggagctgctgttgactctgctgcagaccagc
gcggcgcgggaccagctcttcctgctgctgttcgaaccgggagcagccgactcctgctac
gccctgctgctcaacaacaaacactctgaccgtctccgagagctcgttttcaaggttttt
gagcggatgctgaagtgtgaccgcgtgtatgagaagagcaaacagaggttgcgcttgagg
gatgtgggatactccggcctcagcctgctgttctctgacatgcacctcacttccaccctc
atcaagtgcctccttcaccaagtgctgtctactgatactgtggtgaactataaagatctg
atggctgtggtccagctgacccataaagctgggcccagtgttcgcctgaccgcatgcaaa
aggctgtatgcactgttgcagtctcagcaggatgcagcgctgcagatctccaagcagatg
tgttggcagggcactctaatgcgcttgctcgtccggagccccgggagcgacggaggttcc
agttcgggccgtggtgacgcatccagcctgggaagttttgagctgaatcgcagcaccgga
gcaaaccgcctggagcctcctctggaacgcaggactatcggagacagcgtggggaggctg
aacgaagagcgagacagcgtctcagacagcaggtcaatagacagcctggacaacggagac
ctgatgtctctctccgagacaccaggggacgcgccgacacccaaagcctggggtgggaaa
gttttgagtttggacctttcccatgtgcatctgttcgatcacggggacagcggcagtcag
actcctggtagcatgcctagcacgccttctcctctagagaatgctaagcctttccccgga
gcttcctctctgaatgatgacaacttcctgttcagtgacaatgtgtccctgggagagtct
tttaacagcgagcgtacggaggaggagttggctcgtctggtgttagagattgtgttgtgt
gtcatgtggagaggcgtggaagggtcagatgacgctgcctggctggaaaggggtcaggtg
ttctctgccctcaccaaactgggcactgccaatgagctgttgctgcccgtcgaccacatt
aagctcagtctgatggaaaggatgttggaatgggccgtaacggacaaccgagaggcgacg
acggccacactgccacagcacacggagaatgcggtgcgtctgctgcacatggtgcaggac
ttcctgcaggctgagggtctggtgaatcctgccctatggactgagaaggttctggaggag
acagtgactctgatggacgggctgatggtgtggtatgcctcagggatgcagtggctccag
ctgtctcaggttgggctacggctgctgctcgggttcatggctcaggaagatccgcaggtg
tgtgccatggctacggccaaactgaatggcatcttacaaacaaagacggtggactctcag
gacgaggcctgttaccttctgggccgcgtggagggaatcctcaggcgctccgtgggcgag
gaacggacggaggagacctactcctttttagtgcctcttctccgtaccctcctgtctaaa
gtccacaaactcctgtacatggagctgcacctcccttccctccccgacaccaacggaagt
ccgtcattctttgaggatttccagctgtactgcagctccccagagtggagggtctatttg
gataaatatattataccctacatgaagcagtatgagatcgagacgttcagtcagggtcat
gagaacatggcccttttttggaaggactgttatgaggcgttcatgctcaatctgcaccgc
agggatagagagagaggagagagcaagatacgctttcaggagcaatttgtggaaccattc
agtcgtcgagggcgtcaggagaacctgaggtacaacagcatgctgaaacaaatccacacg
caaaacagcgccatcctcaggcagtggagggcagcgcgcagaggactcttctgtgaaaga
ggaccctgggtggacaagcagcagaaggacatacgctggaagctctctagcgctgagaac
tactcccgtatgcgactcaaactggtgcggaattacaactttgacccccacagggaagcc
agtgccttgagagacaacctaggtgtgcagcaccagcaggtaaatgctgagtcactgttg
ttagaggcggtgaagcaggtgaaggtcagtgatctggaggacgacatcctggaactcctg
gaggaggatcctgcgtcggccaatcaggctgattcagaagaagcgggtcaaaaggagaag
ttggtgatctcagaggactgtgagctggtcacagtggttgacgtctatccgggtcgtctt
gagctcaccacacaacacatctacttctatgacagcagcgcagagaaagaggaaggtgta
ggtcaagactttaaatggcctctgtctcagatcagagagatccatctgcgcagatacaac
ctccgacgctcagcgttagagatctttctcatcgaccagaccaactacttcctgaacttc
aagaaggaggtgcgtaataaagtgtacagtcggatgctgctgctgcgttctctctctctt
catgctactcactcaccgcaggagctgttgaaagcttctggactcacacaggtcactgca
gacaaatgggtgaacagggagatctcaaactttgactacctgatgcagttgaacaccata
gcaggaaggacatataatgatctggctcagtatcctgtgttcccctggatcctgtcggat
tatacgtcagaggagctggatctgtccgatccccgggtgttcagagatctctccaaacct
gtggccgtgctgaacgagaggaatgccaaagctgtcagagaaaaatatgagagttttgaa
gaccccacgggcaccatagaccgtttccactacggcacacactactcgaacgccgccgga
gtcatgcattatctcatcagagtagaacccttcacatccctgcacatccagctgcagagc
ggcaggtttgactgtgctgaccgtcagtttcactccattcctgctacctggcagaccctc
atggacaatcccaatgatgtcaaagagctcatcccagaattcttttacttcccggagttc
ttggagaaccagaatggatttgacctgggtcgcttgcagatctctaaagagagggtaaat
gatgtcatcctacctaaatgggccaaatcccctgaggatttcatctacaagcaccgcaaa
gccctggaatcagagtatgtgtcggcccatctgcatgaatggattgatctgatctttggc
tataaacagaggggcccagctgcagtggaggcccttaatgtcttctattactgcacatat
gaaggggctgttgatctggacgccatcacagacgagaaggagaggaaagctttagaaggc
atgatcagtaactttggacagacaccatgccagttactgaaggaaccccatcccgtgcgt
ctctctctggaggagctggagaagaagagaactcgtttggactccagccctctcaacatt
tttgagcacctcactgaactcaaatcgtttttcattgagggcatcagtgataatgtgccg
ctggttaaagctgttgtccctaagaaccaatcacattcatttatctcgcaggggagtcca
gatactctggtaacgctgagccacaactgcttgatgggaactcatggctggctgccctat
gacaagaacatatccaactattttaccttcatcaaagaccccaccgtagccagtccaaag
actcagaggtttctatcagggccgttctctccaggggttgaagtcacagctcatctgttt
gttgtgtctcatgatgggaagttgctcttcagtggaggccactgggacaacagcctgaga
gtgacatcacttgtcaagggcaaaacagtcgggcaacatatccgccacatggacatcata
acgtgcctggccacagatcactttgggattcacctgatctctggctccagagacaccacc
tgtatggtgtggcaggtgctacagcagggaggtgctccagtgggtctgtcctctaagcca
gtgcaggtattatacggacacacagatgaagttgtgagtgtgtctatcagtacagagctg
gatatggcggtgtctggatcacgggatggaacagtgatgattcacactgttcggaggggt
cagtacatgcgctgtctacggccgccatgtgagagctctctgcccatgtccatcatgcac
ctggcggtgtcctgggagggacatctagtggtgcacacctgcatagagggcaaagccacg
ctgaaggataagaatgctctgcacctgtactctgtgaacgggaagcacctgtgcagcact
cctctgaaggagcaggtgacagacatgtgtgtttcaggagaacatgtggtcatcggcagc
gagcaaggtttcctgtctgtcagagatctgtacagcttgactctgtgcgtgtcaccgatg
gcgatgcgggtgccaatccggtgcgtgtctgtgaccaaggaacaatctcatgtgctggtg
ggactcaatgatggcaagctgatcgtggtgggcgtcgggaaacccgcggagatgcgttct
ggccagattacgaggaaactctggggctccagtaagcgtctcactcagatctcgtctgga
gaaacagagtatcacacccaagagcagccctga
DBGET
integrated database retrieval system
