Ctenopharyngodon idella (grass carp): 127514185
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Entry
127514185 CDS
T08802
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127514185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127514185
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127514185
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
CCSAP
Motif
Other DBs
NCBI-GeneID:
127514185
NCBI-ProteinID:
XP_051752690
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All DBs
Position
1:24550922..24655978
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AA seq
426 aa
AA seq
DB search
MARDFKPGDLIFAKMKGYPHWPARIDEIPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFP
YLTNKDKYGKPNKRKGFNEGLWEIENNPKVELNGHKIMNSGASSVKEMSSNQEGDDEKRR
KSSQVASSEVEEEEEEEEKDDGGDVEVSDQGHLNDENSSQKDTTNVSAKAKRGRKRKIEA
EQDSDTENSSPTSCAPGLDVLSAGGPIPLLKRRGRKPKTEKSLQLQQQASKEPLRLGKDG
KRDDRKGDKRKEVSAEARLHKLHGEIKTSLKIDNLDVRKCLVALDELSSLHITTQHLQRH
CELIATLKKIRKFKASQDVMDKATMLYNKFKSMFLMGEGESVLSQVLNKSLTEQRQFEEA
KRGVLKHTEQIKEQKDHLVFGSGDAVLFQKMRNSAPYRIRLRTWIAGKTHQCIVKWWKIL
SMIPRF
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggatttcaagcctggcgatttgatttttgcaaagatgaagggttatccccac
tggcctgcaaggatcgatgagattccagatggagccgtcaaaccgtcaaatataaagttt
cctatcttcttttttggcactcatgaaacagcattcttgggtcccaaagacatcttcccc
tatttgactaacaaagacaaatatggcaaaccaaacaaaaggaagggtttcaatgaaggc
ttgtgggagattgaaaacaaccctaaagtggagcttaacggacataagataatgaactct
ggagcaagttctgttaaggaaatgagcagcaatcaagagggagatgatgagaaaaggaga
aagtcatctcaagtggctagcagtgaggtggaggaggaagaggaggaggaggaaaaggat
gatggtggggacgtggaggtttctgatcagggacatctgaatgatgaaaactcatcacag
aaagataccacaaatgtctctgccaaagctaaaagaggaagaaaaagaaagattgaagct
gaacaggactctgatacagaaaactcaagccccacttcatgtgctcctggtttagatgta
ttatcagcaggtggaccgattccgttactaaagcgcagaggaagaaaacctaaaacagag
aaatctctgcagctgcaacaacaggcttcaaaggaaccactgagattaggaaaagatgga
aagagagatgatagaaaaggtgacaagagaaaagaagtttctgcagaggccagactgcat
aagttgcatggggagattaaaacatctttaaagattgataaccttgatgtgaggaaatgt
ttagttgcattggatgagttgagttcactgcatattactactcagcatcttcagagacac
tgtgaactcatagctactcttaaaaagatccgcaagttcaaagccagccaggatgtgatg
gacaaagccacaatgctgtataataagtttaaaagcatgtttttaatgggagaaggagag
tcagtgctcagtcaagtgctcaataaaagtctgactgaacagagacagtttgaagaagcc
aagaggggagtgctaaaacacacagaacagatcaaagagcagaaagatcatcttgttttt
ggatccggagatgctgtactatttcaaaagatgcgtaacagcgccccctaccgtataaga
ttgagaacatggattgccggaaaaacacatcaatgcattgtcaaatggtggaaaatcttg
tcaatgataccaagattttga
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