Ctenopharyngodon idella (grass carp): 127514229
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Entry
127514229 CDS
T08802
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127514229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127514229
03036 Chromosome and associated proteins [BR:
cide03036
]
127514229
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127514229
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127514229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Nup120_160
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
127514229
NCBI-ProteinID:
XP_051752828
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Position
6:complement(1308723..1323876)
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AA seq
369 aa
AA seq
DB search
MSLFGTNTGFGSGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLVGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQT
IQIAQHEGPIKTIHWIKAPNYTCIMSGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcgggacgaacacgggctttgggtctgggggaacaggtgtatttggcagc
accaccacagatagtcataatccaatgaaggatgttgaagtaacatcgccacctgatgac
agcataagctgcttggcattcagtcctcctacgatgcctggaaactttctcgtcggaggc
tcatgggccaatgacgtgcggtgctgggaggttcaagataatggtcaaactgtccctaaa
gcccagcagatgcacacaggcccggtgctggatgtctgctggagtgatgatggcagtaaa
gtatttacagcctcctgtgacaaaactgccaagatgtgggatctgaacagcaatcagacc
attcagatagcacaacatgaaggcccaatcaagacaattcactggataaaagcaccaaac
tacacctgtattatgagtggcagctgggacaaaacactaaagttttgggatacacgttcc
ccaaaccctatgatgtccctgcagatgccagagaggtgttactgtgcagatgtggtatat
ccaatggctgttgtagccactgcagaacgtggtcttattgtttaccagttggaaaatcag
ccttcagagtttcgacgtatagagtctcctctgaagcatcagcaccgctgtgtggctatc
tttaaggacaaacagagtaaacctactggttttgcactgggcagcattgagggccgagtt
gccattcactacataaacccacctaacccagccaaggacaatttcacctttaagtgccac
aggtcaaatggaaccaatactgccacaccccaagatatttatgctgtaaatgctatctcc
tttcaccctgtccatggcactctggcgacagtgggctctgatgggcgcttcagtttctgg
gataaagatgctcgcactaagctgaagacctctgaacaattagatcaaccaataacagcc
tgttgcttcaataacaatgggaacatatttgcctatgcctccagctatgactggtctaag
ggacacgaatattacaatccccagaaaaagaattacatcttcttgaggaatgcggctgag
gaactgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system