KEGG   Ctenopharyngodon idella (grass carp): 127514229
Entry
127514229         CDS       T08802                                 
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127514229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127514229
   03036 Chromosome and associated proteins [BR:cide03036]
    127514229
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127514229
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127514229
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 eIF2A Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_Nup120_160 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 127514229
NCBI-ProteinID: XP_051752828
LinkDB
Position
6:complement(1308723..1323876)
AA seq 369 aa
MSLFGTNTGFGSGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLVGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQT
IQIAQHEGPIKTIHWIKAPNYTCIMSGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttattcgggacgaacacgggctttgggtctgggggaacaggtgtatttggcagc
accaccacagatagtcataatccaatgaaggatgttgaagtaacatcgccacctgatgac
agcataagctgcttggcattcagtcctcctacgatgcctggaaactttctcgtcggaggc
tcatgggccaatgacgtgcggtgctgggaggttcaagataatggtcaaactgtccctaaa
gcccagcagatgcacacaggcccggtgctggatgtctgctggagtgatgatggcagtaaa
gtatttacagcctcctgtgacaaaactgccaagatgtgggatctgaacagcaatcagacc
attcagatagcacaacatgaaggcccaatcaagacaattcactggataaaagcaccaaac
tacacctgtattatgagtggcagctgggacaaaacactaaagttttgggatacacgttcc
ccaaaccctatgatgtccctgcagatgccagagaggtgttactgtgcagatgtggtatat
ccaatggctgttgtagccactgcagaacgtggtcttattgtttaccagttggaaaatcag
ccttcagagtttcgacgtatagagtctcctctgaagcatcagcaccgctgtgtggctatc
tttaaggacaaacagagtaaacctactggttttgcactgggcagcattgagggccgagtt
gccattcactacataaacccacctaacccagccaaggacaatttcacctttaagtgccac
aggtcaaatggaaccaatactgccacaccccaagatatttatgctgtaaatgctatctcc
tttcaccctgtccatggcactctggcgacagtgggctctgatgggcgcttcagtttctgg
gataaagatgctcgcactaagctgaagacctctgaacaattagatcaaccaataacagcc
tgttgcttcaataacaatgggaacatatttgcctatgcctccagctatgactggtctaag
ggacacgaatattacaatccccagaaaaagaattacatcttcttgaggaatgcggctgag
gaactgaagcctcggaacaagaaatggtga

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