Ctenopharyngodon idella (grass carp): 127514230
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Entry
127514230 CDS
T08802
Symbol
si:zfos-323e3.4
Name
(RefSeq) volume-regulated anion channel subunit LRRC8E
KO
K22038
volume-regulated anion channel
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127514230 (si:zfos-323e3.4)
Ion channels [BR:
cide04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
127514230 (si:zfos-323e3.4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_6
LRR_EndoS
FTH
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
127514230
NCBI-ProteinID:
XP_051752834
LinkDB
All DBs
Position
6:2277762..2282902
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AA seq
801 aa
AA seq
DB search
MIPVNEFRNITSEQNPQFRVLKPWWDVLSEYLGIAMLMIGVFGCTVQLTQDKISCLPNRF
TDLSGGDRDCSHLRQHKENESLWEFAITKHLSPNIVEVFGRKNGLDIHQYEFVNHFCYER
AVHWYGKYFPYLVVIHSMIFMVASSFWFKFPGTSSKIELFVIILGKCFDSPWTTRAISEV
SEERREERMVIWRKNTMTKSATDNDDDMVSLIRSSVKDQKSAESAASLLDKKEGEQAKAL
FEKVKKFRTHVEEADLLYLMYVLQTVLKVFKFVLITVYSIVLVPNIQIVVMCSVPPDLTG
FGAFCCNYNKAHLFSKLAYCYICFVGVYGLLCIYSLYWLFHRPLKEYSFEAVRLETGIND
IPDVKNDFAFLLHLSDQYDALYSKRFAVFLSEVSECRLRQMNLNNEWTANKLRARLARNA
SERLELHLFMLPGLPDTVFEVSEVESLKLELISNVTVTGSVTQLTALQEIALIHSPAKLQ
LAALNHLRENLKVLRLTFEGPDQVPLWMYTLQNLEELHLSGPLNNELSRNPSLDTLRELK
NLRVLTLRSKLTKIPPSIVDVSNQLLRLCVHNEGTRLQVFNSLKKLVNLAALDLTGCGLE
RIPSAVFSLSHLQELDLRENRLTTVEEILSLQHCRRLTTLKLWHNDISYIPEHVSKLRAL
EMLDASWNKIRTLPLRLCYCTKLRHLDLSHNQLTSLPSEIGVLQCLQFLSVAFNSLESLP
EELFSCKRLKVLALGNNSISTLSPRIGNLAQLVRLELKGNRLDSLPAEIADCPSLKLTAL
IAEDSLMDLLPPDVKDRLKHR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgaatgagttccggaacattacgtcagaacagaacccgcagttcagggtt
ctgaagccctggtgggacgtcctgtctgagtatctgggtatcgctatgctcatgatagga
gtgtttggctgcacggttcagctgacacaagacaagatatcttgcctgccaaaccgattc
acagatctctctggtggagacagggactgcagtcacctaaggcagcacaaagagaatgag
agtctgtgggaattcgccatcaccaaacatctcagtccgaacatcgtggaggtgttcgga
aggaagaacggcctcgatatccaccagtatgagtttgtcaaccacttctgctacgaacgt
gccgtgcactggtatggcaagtacttcccttaccttgtggtcatccacagcatgattttt
atggtggccagcagcttctggttcaagttcccagggacgtcgtccaagatcgagctgttt
gtaatcatactggggaaatgcttcgactcaccctggaccacaagagccatcagcgaagtg
tccgaggaaaggcgagaagagagaatggtcatttggagaaagaatacaatgaccaaatca
gccacagacaacgacgacgacatggtgtctctgatccgatcttccgtgaaggaccagaaa
tcggcagagtcagctgcgtcactcttggataaaaaagaaggcgagcaagccaaggcactg
tttgaaaaagtcaagaagtttcggacacatgttgaggaagcagatcttctttacctcatg
tacgtgctacagacggtgctgaaagtcttcaaatttgttctcatcactgtttatagcatt
gtgttggttccaaatatccagattgtcgtgatgtgctcggtgcctccagatttgacgggg
tttggggcgttctgctgtaactacaataaagcacatctgttctccaaattagcatattgt
tacatatgcttcgtcggggtgtatggactgctgtgtatctattcactttattggctgttt
catcgaccacttaaagagtattcctttgaggcggtccgcttggagaccggaattaacgac
atcccggatgttaaaaatgattttgcatttctcctgcacctcagtgaccagtacgatgct
ttgtactccaaacgctttgccgtcttcctttctgaggtgagcgaatgccgcttgaggcag
atgaacctcaacaacgagtggacggccaataaactccgcgctcggctggcgcgcaatgcg
agcgagaggttggagctccacttgttcatgctgccagggttaccggacactgtctttgag
gtttcggaagtggagtcactcaaactggaactgataagcaatgtcacggtcactggaagc
gtaacgcagctcacagccttacaggagatcgcgttgatccacagtccggccaagctccag
ctagcggctctcaatcatctgcgcgagaacctgaaagttctacgtctgacctttgaggga
ccggaccaagtgcctctgtggatgtacaccttacagaacctggaagagcttcacctgagc
ggccctctaaacaacgagctctctcgcaatccgtccctggacactttacgtgagcttaaa
aatctgcgtgtgctgacgttacgtagtaaactgaccaagataccgcccagtattgtggac
gtttcgaatcagctcttgcgactgtgcgttcacaacgaggggaccaggcttcaggttttc
aacagcctgaagaagctggttaacctggccgctctggatctgacaggctgtggtcttgag
cgaatccccagcgcagtcttcagcctttcccacctgcaggagctggaccttagagagaac
cggcttaccaccgtagaagaaatcttgagtttgcaacactgccgccgtttgacgaccctc
aaactctggcacaatgacatttcctacatcccagagcacgtcagcaaactccgcgccctg
gagatgctggacgccagttggaacaagatccgcacgcttccactgcgcctgtgttactgt
accaaactccgacatctggacctctcccacaaccagctgacatccctgccctctgagatc
ggcgtcctacagtgtctgcagttcctctcggtggcctttaattctctggagagtctccct
gaagagctgttctcttgcaagaggctgaaagtcctagcgttgggaaataacagcatttcc
accttgtctccacggattgggaatctggctcagctggttcggcttgagctgaagggaaac
aggctggattctctgcctgcagaaatcgccgactgtccctcgctgaaactgactgctctg
atagcggaagacagtctgatggacctgctacctccagacgtgaaagacagattgaagcac
agataa
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