Ctenopharyngodon idella (grass carp): 127514269
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Entry
127514269 CDS
T08802
Name
(RefSeq) histone deacetylase complex subunit SAP130a isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127514269
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
127514269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
127514269
NCBI-ProteinID:
XP_051752923
LinkDB
All DBs
Position
6
Genome browser
AA seq
1058 aa
AA seq
DB search
MSSQQFPRAVVPPPGAGPGQTSTDSSVLGTQSVGSEDSRLEVDHSQDPPPGSSSGSAGGI
ASFRDDKQETVVVRPYPQVQALGQPPALPQHVPIQPSPPVTVTAPSVHLLQGQQSSVGEA
SVKAAMKSPMPSRLIAPAPAVSQGHIPVPAKVSGHITVPLESSIAPASIPVATISGQQGQ
SNLHHLMATNVQIFRGSAPALQIGSPAPPHTFTSHLPRGAAAAAVMSSTKGPTVLRPAGG
GNAGPSQPAAVQHIIHQPIQSRPLVTTSTAVLPTMVAPIPAARTQSPVINTPVTHSAEMV
HGRPVTIHPPPAAINIQRPPTPRDTATRITLPSHPAIGAQKAQPPHTITQKPIFNTVTPV
AAATVAPILATNSAPSATTTGSAPHTQMTSSTIVTMTMASHSHATAVTTSAIPVAKVVPQ
PIAHTSPRIQTEYPGERTNLISISGHRSSPNPVNMEARSDNRPSVPVQFQYFLPTQYSSP
YPLTHTYTPITSSVSTIRPYPVTASAQSPALPAQAGVGVATTVHLNPMQLMAVDRIGLPS
AQISTQNIQPASMTAQGIQPAPIGVQGLHAAAPISTQSVQQAPVATQQPQSEAKPPGVIL
AESPAFVTNPIGSTFSGTQSVTTMVQTHPQGAGTGAPTLVSSPRPSILRKKPVNEGAVRK
SLIPAQPSEPNAGRVDSGIRLSGSPRPAGVKPKSDVHVAMAPPVMATVEALPSHGGEQQK
LSTPAQHHSQAIPTLLAPPAPTPPQPTAVLSSLPAAMAVTPPVSASMANAVASPTQPAAS
STAALSSTLPEVKVKQEMEPMDTSQAVPLAPSSMGPAPSLSSQASTLAISAQPGDLLPGA
SPRKKPRKQQHVISTEETEMMETNSTDEERASSRAPGNRPERHESPPREYVDEDGVRYVP
VRPRPPLTLLRHYRNPWKAAYHHFQRYSDIKVKEEKKGSLQDMANQRGVACRAQGWKVHL
CAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQVT
EARDTMMKVLDHKDRVLKLLNKNGTPKKSSKLKRKERA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcagcagtttcctagggctgtggtgcctcctcctggggccggacctggtcag
acttctactgacagcagcgttctagggacacaatcagtaggcagtgaggacagcaggctt
gaagtggatcactctcaggatcctccacctggcagcagcagtggcagcgctggtggaatt
gcatcgttccgtgatgataagcaggagacggtggtggtcaggccctacccacaggtccaa
gccctcggccagcctcctgctctgccccagcatgtgcctatccagcccagccctccggta
actgtgaccgccccatcagtccatctactgcagggccagcagtcaagcgtcggtgaggcc
tctgtaaaggctgccatgaagtcgcctatgcctagtcgtcttatagcacctgctccggct
gttagccaagggcatattcctgttccagccaaagtgtctggacatatcaccgttcctctt
gagagcagcattgctccagcctctataccagtggcaactatcagtggtcagcagggacag
agtaacctgcatcatcttatggccactaacgtgcagatcttcaggggcagtgcacctgcg
ctacagattggatctcctgctcctccccacacttttacttcccatctgcccagaggcgca
gctgctgcagctgtcatgtccagcactaaaggccctactgttctcagaccagccggagga
ggaaacgcaggccctagccaacctgcagctgtgcagcacattatacatcagcctattcag
tctcgacctttggtgaccacctcaacggctgttctacctaccatggtggctcccatccca
gctgctagaacccagtccccagtcatcaacacccctgtcacacactctgcagaaatggtt
catgggcgaccagtaacaattcaccctccaccagccgccatcaacatccagcgtccacca
acccctcgggacactgctactcgcatcaccctcccctcccacccagctattggagcccag
aaggcccagccccctcacaccatcacacaaaagccgatcttcaacactgtgacccctgtt
gccgctgccactgtagctcctatcttggctaccaacagtgctccttctgccaccactaca
ggctctgcaccacatacccaaatgaccagcagcactattgtcactatgacaatggcctct
cattcccatgctacagctgtgaccacctctgctattcctgtcgctaaagtggttcctcag
cccattgcccacacatccccacgcatccagacagagtatccaggagaaaggaccaacctg
atttccatatcaggtcatcgctcttccccaaaccctgtcaacatggaagcccgcagcgat
aacaggccgtcagtgccagtgcagtttcagtacttcttacccacacagtactcatcccct
tatcctctgacccacacctacacccccatcaccagctctgtctccaccatccgcccctac
ccagtcacggcttcagctcagagcccagctcttcctgctcaggctggtgtgggtgtggcc
accactgtgcacttgaaccccatgcagctgatggcggtggatcgcatcggcctgccatct
gcccagatcagcacccagaacatccagccagcctctatgactgctcagggcattcaacct
gcaccaataggagtgcaggggctgcatgccgctgcaccaatcagcacacagagcgtacag
caggctccggtcgccacacaacagccacaatcagaagcaaaaccgccaggtgtcatcttg
gctgaaagtcctgcttttgtaactaatccaatcggaagcactttcagtggcacgcagtct
gtcactacaatggtgcagacacacccccagggggcgggcacaggtgcacccacacttgtc
tcgtccccccgacctagcatccttcgcaagaaacctgtgaacgaaggggcagtacgtaaa
agtctgatcccagcgcagccgagtgagcctaacgctggccgggtggatagtgggataagg
ctgtcgggatcccctcgcccagcgggagtgaagcccaaatctgatgttcatgttgctatg
gcgcctccagtcatggcaaccgtagaggctcttccgagtcatggaggtgagcagcagaag
ctgtctactcctgcccaacatcattcacaggccattcccacccttctggctccaccagct
ccgacacctcctcagcccactgctgttctttcttccctgccggcagccatggctgtcact
cctcctgtttctgcctccatggccaatgcagtggcctctcccacccagccagcggccagc
agcactgctgccctgagctccacccttccagaagttaaagtaaaacaggaaatggagcca
atggatacttcacaagcagtgcccttagctccttcttcgatgggtccggctccatccctc
tcctcccaggcctccaccctggccatatctgctcaacctggagacctcctgcctggggcc
tccccgaggaagaaaccccgcaaacagcagcatgtgatctccactgaggagacagagatg
atggagaccaacagcacagatgaagagagagctagcagccgagctccaggaaacaggcct
gaaagacatgagtctccacctagagaatatgttgatgaggacggtgttcgctatgtgcca
gtccgtcccagacctcccctcactcttctacgccattaccgtaacccatggaaggctgct
tatcaccacttccagaggtacagtgacatcaaagtcaaagaggaaaagaaaggaagcctt
caggacatggccaatcagagaggagtagcatgtcgtgctcagggctggaaagtgcacctg
tgtgccgcacagctgctacagctgtctaacttggagcatgacgtgtacagccggctgacc
accctgcaggaagggctcatcccaaagaagagagctggagctgatgatgacttgcaccgc
attaatgagctcatacagggtaatatgcaacgctgcaagctcgtgatggatcaggtgact
gaagctcgcgacaccatgatgaaagtattggaccataaggacagagtcctcaagctgctc
aacaagaacggaactcccaagaagagctccaagttaaagcgcaaggagcgggcatag
DBGET
integrated database retrieval system
