Ctenopharyngodon idella (grass carp): 127514298
Help
Entry
127514298 CDS
T08802
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04814
Motor proteins
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127514298
09142 Cell motility
04814 Motor proteins
127514298
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127514298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127514298
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127514298
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
127514298
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127514298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Nbas_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
127514298
NCBI-ProteinID:
XP_051752990
LinkDB
All DBs
Position
6:4467101..4483432
Genome browser
AA seq
644 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKELDGRKEGASPPQDDSDLERKRREA
EALLQSMGIVDASMVQPLRVVTEDTCLFHYLVPPPMSPSAKSVGTPSETGSQDSGDGGTG
PRTLHWDSDPSTLLLHSDSQLGRGPLKLGMSKVTQVDFPPKELVSYSKETQTPTQTHHKN
DEEEEEDLAVTQPVLEPQEEKDSEKEEEEAPHELTEEEKQQILHSEEFVTFFDHSSRIME
RALSEQVDVFFDYSGRDLQDKEGESQAGAKLSLNRQFVDERWSKHRVVTCLDWSPQYPEL
LVASYCSNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAQFHPNLVVGGTYS
GQIVLWDNRSNKRTPVQRTPLSASAHTHPVFCVNVVGTQNAHNLISISTDGKMCSWSLDM
LSTPQDSLELVFKQSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFEG
HHGPITGLDCHTAAGPVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSP
THPALFACVDGLGRLDLWNLNNETEVPTASITVEGNPALNRVRWAHSGREVAVGDSEGQV
HIYDVGEQISVPRPDEWTRFVRTLTEINENREDVEELAAQRLAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagcgagctgaaagcagagttagagagaaagaaacaacgactggcccag
atcagggaggagaagaagaggaaagaggaagaacgcaagaagaaagagctggatggacgg
aaggagggagcatctcccccgcaggatgactctgatctggagaggaagaggagggaggca
gaagccctgctgcagagcatgggaatagtggatgcttcaatggtgcaacctctgcgtgtg
gtaacagaggatacatgtctgtttcactatttagtcccccctcccatgtccccctctgcc
aaatcagtgggcacacccagcgaaacgggcagccaggactcaggagacggcggtacgggg
ccgaggactcttcattgggactctgacccctctactctactgctccattcagactctcag
ctcggacgcggcccgctgaagttgggcatgtcaaaggtcacacaggtggacttcccgccc
aaagagctggtgtcatactcaaaagagacccagacgcccacacagactcatcacaaaaat
gatgaggaagaggaggaagatctggctgtgacgcagcctgtactggagcctcaagaggag
aaagactctgaaaaagaggaagaagaagcgcctcatgagctgacggaggaagaaaaacaa
cagattcttcactcagaggagttcgtgactttctttgaccacagctctcgtattatggag
cgcgctctctctgagcaggtggatgtgtttttcgactacagcggtcgagaccttcaggat
aaagagggggagtctcaggctggggccaaactctccctgaacagacagtttgtggacgaa
cgctggtctaaacacagagtcgtcacctgtctcgactggtcaccacagtaccctgagctt
ctggtggcgtcgtactgcagtaatgaggatgcgccacatgagccggacggtgtggctctt
gtctggaacatgaaatataagaaaaccacaccagaatatgtcttccactgccagtctgca
gtgatgtcagcagcgtttgcacagtttcatcctaatctggtggttggaggcacgtactcg
ggtcagatcgtcctgtgggacaaccgaagtaacaaacgcacccctgtacagaggactcca
ctctcagcctcagctcacacgcaccctgtgttctgtgtgaatgtggtgggaactcagaac
gctcacaatctcatcagcatctccacggatgggaagatgtgctcctggagtctggacatg
ctgtctacaccacaggacagtctggaactcgtgttcaaacagtccaagtcagttgccgtg
acctccatgtcatttcctctgggtgatgtcaataactttgtagtgggcagtgaggacggg
tctgtctacactgcctgtagacatggcagtaaagcgggcatcagtgagatgttcgagggt
catcatggaccaatcacagggctcgactgccacacagcagcgggaccggtcgacttctct
cacctgttcgttacttcctcttttgactggaccgtcaaactctggagcaccaagaacaat
aagcctttgtactcttttgaggacaattcagactacgtgtatgatgtcatgtggtcaccc
acacacccggctctgtttgcttgtgtggacgggctcggacgtttggacctgtggaacctt
aacaatgaaactgaggttcccacagcaagcataaccgtggaaggaaaccctgcgctgaac
cgcgtgcgctgggctcactcgggacgagaggtggccgtcggcgactctgagggtcaggtg
cacatttacgatgttggagagcaaatttcagtgccccggccggatgagtggactcgcttt
gtgcgcacgctcactgagatcaacgagaaccgtgaggacgtagaggaactggctgctcaa
cgattggctgcatga
DBGET
integrated database retrieval system
