Ctenopharyngodon idella (grass carp): 127514310
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Entry
127514310 CDS
T08802
Name
(RefSeq) rab11 family-interacting protein 4B isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127514310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127514310
Membrane trafficking [BR:
cide04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127514310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
INO80F
WD40_alt
ZapB
bZIP_1
Motif
Other DBs
NCBI-GeneID:
127514310
NCBI-ProteinID:
XP_051753012
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Position
6:14245372..14278211
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AA seq
533 aa
AA seq
DB search
MSIRECLDSPVLEDEEGEEGRGVERESDRDSAVDSALSSEISDEGRTGQKEEGIGICLPG
EKFSQMYNRSEISDQSTHSSASLNEEQFEDYGEGEDGDYTPSNPCPDDEIRINGCSDLGS
SVSSSAGQTPRKMRRAGDQIDVFCSQCCKRVSLLNDLENRLKNLKTNSPNRKISSTAFGR
QLLHNSNLSSSNGSTEDLFHDSIDSCELDITEKVSYLDKKVTELESEILMNGDVKSKLKQ
ENIQLVHRIHELEEQLKDQETRAESMMEEELRRHREAYSRLEKDKNTQIELLKNRVHQLE
EENGDMAMNMNRLKSQTEKLDEERQRMTDKLEDTSLRLKDEMDLYKKMMDKLRQNRNEFQ
KERNTMQELIEDLRRELEHLQVYKLEAERMGRVRRPSISLSEYSTRTRESELEQEVKRLK
QRSVSKDMPFDLQQLVSARARLFPSLMENQKLREQNEDLNGQLLSLSLHEAKNLFATQTK
AQSLAMEIDHASRDQLMEALKEQEEINFRLRQYMDKIILSILDHNPSILEIKN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccgggagtgcctagatagcccagtgcttgaggatgaggagggtgaggaaggc
agaggggtggagagagagtcggacagagacagtgcagtagatagcgctttgtcatcagag
atatcggatgaagggagaactggacaaaaagaggaagggattgggatttgcctcccagga
gaaaagtttagtcagatgtataatcgctcagagatttctgatcaatctacacattcatct
gcctcattaaatgaggagcagtttgaggactatggagaaggagaggatggagactacact
cctagcaacccctgtccagacgatgagatccgaattaatggatgctcagatctgggctcc
tctgtttcctccagtgctggtcagactcctcggaagatgcgccgcgctggtgaccagatt
gatgtgttttgctctcagtgctgtaagagggtcagtctgctcaatgacctggagaatagg
ctgaaaaacctcaaaaccaacagcccgaacagaaagatctccagcactgcatttggaagg
cagctgctgcacaacagtaacctcagcagtagtaacggcagcacagaggatttgttccat
gacagcattgactcctgtgaattagacattactgagaaggtaagttacttggacaagaaa
gtgacagagctggaaagtgagattctgatgaatggggatgtgaagtccaagctgaaacag
gaaaacatacagttggtccacaggattcacgagttggaggagcagctaaaagaccaggag
accagagcagagtccatgatggaggaggagctcaggagacacagggaggcctacagtcga
ctggagaaagacaagaacacacagatagagctgcttaaaaatcgagtacatcagctagag
gaggaaaatggagacatggcaatgaacatgaacagactaaaatcccagacagagaagctg
gatgaggagaggcagcggatgacagataagctggaggatacgagcctgcggttgaaggat
gagatggatctgtacaagaagatgatggacaagctacgacagaatagaaatgagtttcag
aaggaaagaaataccatgcaggagctgattgaggaccttcggcgagagctggagcacctc
caggtatacaagctggaggcagaacgaatggggcgtgttcgcagaccttccattagccta
tcagaatacagcactcgaacgcgtgagagtgagttggaacaggaggtcaagagactaaaa
cagagaagtgtttccaaggacatgccctttgaccttcagcagcttgtgtctgctcgggca
cgactctttccgagtctgatggagaaccaaaaattgagagaacagaacgaagatctaaat
ggtcagcttctcagtctgagcctccatgaggccaaaaacctgtttgccacacagacaaaa
gcacagtctctggccatggagattgatcatgcctcccgtgaccagttgatggaagccctc
aaggaacaagaggagatcaacttccgtctaaggcaatacatggacaagatcattttatcc
attctggaccacaacccatctattctggaaatcaaaaactaa
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