Ctenopharyngodon idella (grass carp): 127514338
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Entry
127514338 CDS
T08802
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3a
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127514338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127514338
Membrane trafficking [BR:
cide04131
]
Endosome - Golgi transport
Others
GGA
127514338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
Prominin
Motif
Other DBs
NCBI-GeneID:
127514338
NCBI-ProteinID:
XP_051753070
LinkDB
All DBs
Position
6:complement(14975288..14989947)
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AA seq
699 aa
AA seq
DB search
MADPEGESLESWLNKATNPSNRQEEWEYIIGFCDQINKELEGPQISVRLLAHKIQSPQEW
ESLQTLTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSERVKTKVIELLYS
WSVALPDEAKITEAYQMLKKQGIVTEDPEVPVDKTLVPSPKPKNPVFDNEEKSKRLAELL
KSKKPEDLQEANRIIKNMVKEDEAIQQKASHRANTLEEVNNSVKLLNEMLRHFKKDESTQ
ADKELLTDLYNDCDKLRTAVFRLATETEDDDSALGDILHASDDLSRVINSYKKIVEGQTI
VIDMPGLTASKYTNDGSSSEILIDLADLDSGSPSPLKHVLTPPQHSDSIPADLLTLTSII
GAQPSSSNTSSGSSSFQISPPSSQLPSSLSLLDEELGSLGLGSVDSNSKKSAERNTKEAQ
SNQWISSQTSKPVIDLLCSSAPLNPLISTAPPTSEATSVTGFENSLQQSSKDFAMLDLDK
ANSQSKYSSSGSRELRAWEENIHPALPTFSFPAGITPVPSAVTSAKPQSFAPDSPLFRSL
SPTLPTSQSPSGSDISLNSVFVPLEAIKPSKECPVTAYDKDGVRVLLHFATDHPPGRPDV
LVIVVSMLNTAPLLVRNVVLQAAVPKSMRVKLQPPSGTEMVPFNPFMPPSSITQIMLLAN
PLKEKVRMRYKLTFILGDRQVTESGEIDKFPPVERWGHL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggaaggagagtcactggagtcatggctaaacaaagccaccaatccttcc
aacagacaggaggagtgggagtacatcattggattctgtgaccaaatcaataaggaactt
gaaggcccacagatatcggtcagattattagcacataaaattcagtcaccccaagaatgg
gagtcattacaaacacttactgttttagaagcctgcatgaagaattgtgggagaaggttt
cataatgaagttggaaaatttagatttttaaatgaactcattaaagtagtttcacctaag
tatttgggagacagagtgtctgaacgagtgaagaccaaagtaatagagttgctctacagc
tggtcagttgctttaccagatgaggcaaagatcacagaggcctatcagatgctaaagaag
caaggtattgtaacagaagacccagaggttcctgtggacaagacccttgttccctcgcca
aagcccaagaatccagtgtttgacaatgaggaaaagagtaagcgtcttgcagaacttctt
aagagtaaaaagcctgaggatcttcaagaagccaaccgcattatcaagaacatggtcaaa
gaggatgaggctatacagcagaaagcttcccatcgtgccaacaccctagaggaggtgaac
aacagtgtgaagctccttaatgagatgctaagacatttcaaaaaagatgagtcgacacaa
gcagacaaagaacttctaacggatctttataatgactgtgacaaacttcgaactgctgtc
ttcagactcgccaccgagacagaggatgatgacagtgccttaggtgatattttgcacgct
agtgatgatctctcacgggtaatcaactcctataaaaagattgttgaaggacagaccatt
gtgattgacatgccagggttaacggcctcaaaatacaccaatgatggaagctcatctgag
attttgattgatttggctgatttggactctgggtccccttcacccctcaaacatgttttg
actccacctcagcactccgattccattcctgctgacctcctcacacttacatctataatt
ggagctcagccttcctcttccaacacgtcttctggatcgtcaagtttccaaatcagtcct
ccatcaagccagcttcccagcagtctttctcttctggatgaagaacttggttcattaggc
cttggtagtgtggactcaaactcaaagaagtcagcagagaggaatacaaaagaagctcaa
agcaatcagtggatttcttcacaaacttctaaaccagtgattgacctgctctgcagctct
gctccattaaatcctctaatctcaacagcgccacctacctctgaagctacctcagttaca
ggctttgaaaactcccttcagcagagcagtaaagattttgccatgttggacctggacaag
gctaatagccagtccaaatattcaagctcgggcagcagagaacttagagcttgggaagag
aacattcatcctgcattacccacattcagttttcccgctggaataacaccagtgccttct
gctgtaacctctgccaaacctcagagcttcgccccagacagccctctcttcagatccctc
tctccaacattacccaccagtcagtcaccctcaggctcggacatctccctaaacagtgtc
tttgtcccactggaggccattaaaccaagtaaggagtgtccagttacagcctacgataag
gatggtgttcgtgtgttgttgcactttgctactgaccatccacctggtcgtcctgatgtt
ctggtgattgtcgtgtccatgttaaatacagcaccactgttagtgaggaatgtagtgctt
caggcagctgtgccaaagtctatgagagtgaagctgcagcccccttctggaacagaaatg
gtcccctttaaccccttcatgccccccagttctatcacacagatcatgctgctggctaac
ccactgaaggagaaagtgagaatgaggtacaagttgacattcatccttggagatcgacag
gtcacagagtccggtgagatagacaagttccctccagtggaaagatggggtcatttatag
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