Ctenopharyngodon idella (grass carp): 127514352
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Entry
127514352 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 7
KO
K24055
leucine-rich repeat-containing protein 7
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127514352
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
127514352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_EndoS
LRR_5
PDZ_2
LRR_NXF1-5
LRR_At5g56370
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
127514352
NCBI-ProteinID:
XP_051753085
LinkDB
All DBs
Position
6:complement(19103661..19186002)
Genome browser
AA seq
1559 aa
AA seq
DB search
MDNYSTIQLQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSSLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKCLSVVEASVNPIAKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSVG
KLRQLRYLDLAKNRIESLDADISGCESLEDLLLSSNMLQQLPDSIGKLKKLTTLKVDDNQ
LTSLPNTIGSARGKTGLSLLEEFDCSCNELESLPPTIGYLHNLRTFAADENFLAELPREI
GNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
EFEDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTTHPLNTEKCSSGTN
MELHSQDKYEPKWPIAPKEVTEREVKDFSKPPMSDQGVIHNSAIDIPKRKDKEDLTESSE
ISLHRVVPKPQQPENTSLAVTSSSCFCLIDSMGGSPNDIRISDMRPTLVEPPMYKPKVVL
LGKEKKESTDESEPDKMHCLNNSGSSATYSDYSPSQGSSGSSNPPGNASNLQTSGKEGPS
QTHWTNRLAQSFPKPIETKPLLSQRETPPSSTLQQRGERRPLSDTFDSWNDAPHYDNTGF
VSEETPLDTPSSSAGNPMLGSKPRSASMAHGRRPLMRQERIVGVPLELDQSQHTFHTVRN
TPETEVPPPSNPWQNWTRTPSPFEDRTAFPSKLEITPGNSPNPDRKDFEQEMGELPSTFP
STRAWGFLDSTDSGTGRGHPNIFSHVQGGKDPNKGNTMVVSKSSERLSPMMREVKAKFKK
SQSIDEIDTGSYKVYSIPLDSYSSSIENQGSVDRADLPVPLEQSMSRSQSAPMLDDDLDG
YGLNKSSQQQKPAIPKKVYHFDQSFNPQRAMDVVKAERRVPPPFPNTPEYVNQPGKTLPK
ELVSPRGYRGYPPMEQMFSFAQTAVTDDAINPQLSVQPQRSRPGFLRRADSLVSSTEMAL
FRRVAESQELQLAEHYNRPQQIKSMLEQQNSLSTIADTQFHKRNGRYDEDYSSYQEPKKP
IMGYPTKSLTQRRPLSARSYSTETYGASQARPVSARPTMAALLEKMPSDYNLSTCTEKSP
EADMKLRPVPQKQEDPTSKMPVDWRQQLLRHIEAKRLDRSAVLKHNTVNFGMLYSGGYAA
PHASRSMTINFYNNTKHENQTTQWLPLPNTPSQQSNILDNGQEVVSPSSQWAPYSLGRRD
VPPENMNVIKKPGVHNPHQQQGMMITSATPPHRTARDQQYEGAINKVSIQQYQSPLPMPI
TTTSPRPQSARCFIQTKGQKSMDGFPEQLCVRIEKNPGLGFSISGGISGQGNPFKPSDMG
IFVTRVQPDGPASNVLRPGDKILKANGHSFLHMEHETAVSLLKNFPKTVDLVILRESTI
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcgacgattcagttgcagtgtctggagatgactactaagaggaagatc
atcggccgcctggtgccctgtcgatgcttccggggggaggaggaggtcatctcagtgctg
gattattcccactgtagcctgcagcaggtccctaaggagatcttcagcttcgagcgcaca
ctagaagagctctatcttgacgccaaccagattgaggagctgcctaagcaactcttcaac
tgtcaagcgctcaagaaattgagcatgcctgacaatgacctctccagcctgccaaccacc
atcgccagccttgtgaatctaaaggagttagatattagtaaaaatggtattcaagagttt
ccagacaacatcaaatgctgtaaatgtctatcagttgtggaggccagtgtaaatcctata
gccaagctcccagacggcttcacccagctcctcaacttgacacagctcttcttaaatgac
gccttccttgaatacctgcctgccaattttgggagattgtctaaattacggatcctggag
cttcgtgagaatcacctgaaaactatgccaaagtcaattcataggctttcgcaactggag
cggttagacttgggaagcaatgaattctctgaactgccagaagtgctggagcagatccat
agtttaaaagagctgtggctggacaacaattcattacaaaccataccagggtctgttggg
aaactgaggcagctgcgatatctagacttggccaagaacaggattgagagtctagatgca
gatatctctggctgtgagtccttagaggacctacttctttcctccaacatgctgcaacag
ttacctgattcaataggaaagttgaaaaagttgacaacattaaaagttgatgacaaccag
ctcacatcactgcctaacactattggaagtgcacgtggcaaaaccggtttatcactttta
gaggagtttgactgtagctgtaatgaactggaatccctgcctcccaccattggctacctg
cacaatcttcggacatttgcggccgatgagaacttcttggctgagctgcccagggagatt
ggaaactgcaagaatgtcacggtcatgtccttgcgctccaataaactggagtttctgcct
gatgaaattggacagatgacaaagctacgtgttctcaatctaagtgacaataggttaaag
aatcttcccttcacgttcactaaattgaaagatcttgctgcactctggttatctgacaat
cagtccaaggcccttatcccccttcaaacagaggctcaccctgagaccaaacagagagtc
cttaccaactacatgtttcctcagcagccccggcatgatgaggattaccagtctgacagt
gacagctttaatcccactctctgggaggagcagagacagcagaggatgactgtggcattt
gagtttgaggacaagaaggaagaagaggacaactcaggaaaagtgaaggttgagattaat
ctgaagcgctatcccaccccttacccagaagacctaaagaacatggtgaagtcagtgcag
aacctggtgggtaaaaccactcaccccctcaacactgaaaaatgctcttctgggaccaat
atggagctccacagtcaagacaagtatgagcccaagtggcccattgctcctaaggaggtg
acggagcgagaggtcaaagacttttctaaaccaccaatgtctgatcaaggtgtcatccac
aactcagccattgacatcccaaaacgcaaagacaaagaggatctgactgagagctcggaa
atttctttacatcgcgtcgttcccaagccgcaacagccagagaatacgagcctggccgtt
acttcctcttcctgtttctgcctcatagactcaatgggaggttcccccaatgatatccga
atttctgacatgaggccaactttggtagagccacctatgtacaaaccaaaggttgtgtta
ctgggcaaggaaaaaaaagagtccaccgatgagtctgagccagacaaaatgcattgtttg
aacaacagcggatcatctgccacttattcagactactcaccctcccagggatcatctggc
tcctccaacccacctggaaatgccagtaatctgcaaacatctgggaaagaggggccatca
cagactcactggaccaacaggctggctcagtctttcccaaagcccattgaaaccaagccc
cttctgagccagagggaaacacctccttccagcacgctgcagcagcgaggtgagaggcgg
ccactcagcgacaccttcgacagctggaacgatgccccccactatgataacacaggtttt
gtctcagaggagacgcctcttgacactccaagcagcagtgctggaaaccccatgctaggc
tcaaagccccggagtgcctcaatggcacatgggcgacggcctctcatgagacaagagcgc
attgtgggagttcccttagagctcgatcagtcgcaacacactttccacacagttcgcaac
acccctgaaactgaagtgcctcctccctctaacccctggcagaactggacaaggactccc
agtcccttcgaggacaggacagctttcccttccaagttggaaattaccccaggcaacagc
cccaatcctgaccgtaaggactttgaacaggagatgggagaactacccagcacttttccc
tcaactagagcctgggggtttctggactcaacagactcagggacgggacgaggtcatccc
aacattttttcacatgtccagggtggaaaagacccaaacaaaggaaacactatggttgtt
agcaagagttctgagagactttcgccaatgatgagggaggtaaaagcgaaatttaagaaa
tctcagagcatagatgaaatcgatactgggtcatacaaggtttacagcatccccttggac
agctacagttctagcatagaaaatcagggaagtgttgatagagcagacctccctgtacca
ctagaacagagcatgtctaggagccaatcagctccaatgctggacgatgatctggatggc
tacggtttgaataaaagctctcagcagcagaagcctgccatcccaaagaaagtttaccat
tttgaccaaagcttcaacccacaaagagccatggatgttgtgaaagcggagaggagagtt
cctccaccattccctaacacccctgaatatgtaaaccaacctgggaagacgttaccaaag
gaacttgtgagcccgagaggctaccgaggctatcctccgatggaacagatgttttcattt
gctcagactgcagttaccgacgatgccatcaatccacagctctcggtccagccccagcgc
tccaggccgggcttcctgaggcgagctgactctctggtaagttcgacagagatggcgctc
ttccgcagagtagctgagagccaagagctgcagctggcagagcactacaacaggcctcag
cagataaagagcatgctggaacaacagaacagcttgtctaccatcgctgacacccagttc
cacaagaggaatggtaggtatgatgaagattactcatcttatcaagaacctaaaaagccc
atcatgggttaccccaccaagagtctgacacaacgtcgccccctgtctgcacggagctac
agcacagagacatacggggcatctcaggcaaggccagtgtctgcccgacccaccatggct
gcactgctggagaaaatgccttcagattacaatcttagtacatgcactgagaagagccct
gaggctgacatgaagctgagacctgtccctcaaaaacaagaggacccgacctccaaaatg
ccagtagattggagacagcagctgcttagacacatagaagcgaagaggctagaccggagc
gctgtccttaagcacaacacagtaaacttcggcatgctgtactctggaggctatgctgca
ccgcatgccagcagaagcatgacaataaacttttacaataacacaaagcatgaaaaccaa
acaactcagtggctacctctaccaaatacaccttcacaacagagcaatattttagataat
ggacaagaggtggtttccccaagtagtcagtgggccccatactcactgggacgaagagac
gtgccaccagagaacatgaatgtcatcaaaaagcctggcgttcacaatccccatcaacaa
caggggatgatgataacctcagccaccccaccccaccggacggcccgtgaccagcagtat
gagggggccattaacaaggtgtccatccagcagtaccagtcacctctgcccatgcccatc
accaccaccagcccccggcctcagagcgcccgctgcttcatccagactaaaggccagaag
agcatggatggctttccagagcagctctgtgtgagaatcgagaagaaccctggccttggt
ttcagcatctcagggggaatcagtggacaggggaaccccttcaagccctcggacatgggt
atctttgttactagggtacagcctgatggacctgcctccaacgttctacgaccaggggac
aaaattctgaaggccaacggacatagtttcttacacatggagcatgaaacagcagtgtct
cttctgaagaatttcccgaaaactgtggacttggtaatcttaagggagagcacaatataa
DBGET
integrated database retrieval system
