KEGG   Ctenopharyngodon idella (grass carp): 127514357
Entry
127514357         CDS       T08802                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03010  Ribosome
cide04120  Ubiquitin mediated proteolysis
cide04137  Mitophagy - animal
cide04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    127514357
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127514357
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127514357
   04137 Mitophagy - animal
    127514357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cide03011]
    127514357
   04121 Ubiquitin system [BR:cide04121]
    127514357
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127514357
Ribosome [BR:cide03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    127514357
  Archaea
    127514357
Ubiquitin system [BR:cide04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   127514357
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127514357
  Exosomal proteins of colorectal cancer cells
   127514357
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 127514357
NCBI-ProteinID: XP_051753091
LinkDB
Position
6:complement(4838995..4842060)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtgaaaaccttaacggggaaaaccatcaccctcgaggttgagccctct
gatactattgaaaatgtcaaggcaaagattcaagacaaggaaggaatccctcctgatcag
cagagattgatctttgctggtaaacagctggaggatggacgcaccctgtctgactacaac
attcagaaggagtccacactgcatctcgtgctgagactgcgtggtggtgctaagaagagg
aagaagaagtcctacaccacccccaagaagaacaagcataagagaaagaaggtcaagctc
gctgtgcttaaatattacaaggttgatgagaacggcaagatccaccggctgcgccgcgag
tgtcccgcagatgagtgtggagccggggtgttcatggccagccactttgaccgtcattac
tgcgggaagtgctgcctgacttactgcttcaacaaaccagaggacaagtga

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