Ctenopharyngodon idella (grass carp): 127514403
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Entry
127514403 CDS
T08802
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127514403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127514403
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
127514403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
127514403
NCBI-ProteinID:
XP_051753156
LinkDB
All DBs
Position
6
Genome browser
AA seq
737 aa
AA seq
DB search
MRRSLAPSQVAKRKQGADSDDEDWEPEITSQSKRDCRENYISPFRKPLTPLTNRPVCTDG
NEHEAFIRKILSKPFKVPIPNYTGSLGLRALGLRRAGVRKALHDPFEDGALVLYEPPAIS
AHELIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGL
GKTLQCITLMWTLLRQSPDFKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGS
KHEIDRKLENFISQHGMRVPTPILIISYETFRLHTEVLHRGRVGLVICDEGHRLKNSDNQ
TYQALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDA
DASDKDRSAGEEKLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLF
LKQAKPVESLQTGKITVSSLSSITSLKKLCNHPALIYEKCLAGEEGFDGAMDLFPQNYST
KAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRTRRYLYVRLDGTM
SIKKRAKVVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARV
WRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFSL
NEDTVSDTHDRFRCKRCTNNRQVRPPPDDSDCTSDLSNWHHCAEKRGLRDPVLQASWDAA
VSFVFHQRSHEDQRGVV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagtctagcacccagtcaggtggccaaaaggaaacaaggggcggattcagat
gatgaagactgggagcctgaaatcacatcacagagtaagagagactgtcgagaaaactac
atctctcccttcagaaaacccctgacgccgctcaccaacagacccgtctgcacagatggc
aatgagcacgaagcttttattcgcaagatcttatcaaagccgtttaaagttcccattcca
aattatacaggctcgttgggtctgcgggctctgggactgaggcgagccggtgtgaggaag
gccctgcatgatccgtttgaagatggagccctggttctatatgagccgcctgccatcagc
gctcatgagctcatcaaagcagacaaggagaagttaccagtgcatgtggttgtagatcca
gtgctcagtaaagtgcttcgaccccatcaacgagagggtgtaaagttcctgtgggactgt
gtgacaggaaggcggattgaaaactcgtatggctgtattatggcggatgagatggggctg
ggcaagacactgcagtgcatcactctcatgtggactttactgagacagagtcctgatttc
aaacctgaaatcgacaaggccatcgtggtgtccccttccagccttgtgcgaaactggtac
aatgaagtgggcaaatggctcggtggacgtgtgcagcctgttgctattgatggcggctcc
aaacatgagatagatcgcaaactggagaactttatctcccagcatggcatgagagtgcca
actccaattttgataatatcctatgaaacattccgcctccacactgaagtcctgcacagg
ggcagagttggactggttatctgtgatgagggtcacaggctgaaaaactcagacaatcag
acgtaccaagcgctgaactctatgaacgcccagaggagagtgctgatatctggaactccc
attcaaaatgacttactggaatatttcagtttggtgcactttgtaaattccggtatcctt
ggcacagctcaggagtttaagaaacggtttgagattccaatcctaaagggtcgtgatgct
gacgccagtgataaagacaggtctgccggagaggagaaactccaggaactcatcagcatt
gtaaacaggtgtttgattcgaagaacctcagatattctttccaagtatctgcctgtgaag
attgaacaagttgtttgctgcaatctgactcctctccagaaagagctgtacaagttattc
ctgaagcaggccaaacctgtagagagtctgcagaccggcaagatcacggtgtcttctctg
tcgtccatcacctcgcttaaaaagctctgcaaccatcctgccttgatttatgagaagtgt
ctggcaggagaagagggctttgatggagcaatggacctcttcccacaaaattattcaact
aaagcagtagaaccacagctctcagggaagatgctggtactggactatatcctggcgatg
accagaacaacaacaagtgacaaagtggttctggtctctaattatacacagactttggac
ctttttgaaaagctgtgtcgaacccgaagatacctttacgttagactggatgggacaatg
tccatcaagaagagagcaaaggttgtggagagattcaacagcccctctaatccagagttc
atcttcatgctgagcagtaaggctggaggctgtgggctgaatctgattggtgcaaatcgc
ctggtaatgtttgaccctgactggaatccagccaatgacgagcaggcgatggccagagtg
tggcgagatggacagaagaagacctgctacatctacagactgctgtcgacgggaacgata
gaggaaaagatcttacagagacaggctcataagaaagctttgagtagctgcgtagtggat
gaagaacaggacgtggaaagacatttctcacttggagagctacgagaactcttctcactc
aacgaagacacagtcagcgacacacatgacagatttcgctgtaaacgctgtacaaacaat
cgtcaggtgcgtcctcctccagatgattcagattgcaccagtgatctgtccaactggcac
cactgtgcagaaaaaagaggcctgagggacccggttctgcaggcatcctgggacgctgcc
gtctctttcgtctttcaccagcgctcgcatgaggaccagagaggagtcgtctga
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