Ctenopharyngodon idella (grass carp): 127514437
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Entry
127514437 CDS
T08802
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127514437
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127514437
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127514437
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127514437
Ubiquitin system [BR:
cide04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127514437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
127514437
NCBI-ProteinID:
XP_051753213
LinkDB
All DBs
Position
6:34473679..34499878
Genome browser
AA seq
2569 aa
AA seq
DB search
MTATTRGSPVGGNESQSQAPDGQNQTLLPQNQTPSPNSSNETSPLSPPEEPGQGEAPPAQ
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVRCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVVKLAQDWFPLLELLAMATNP
HCKFHIYNGTRPSESVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSVQALNVQIIAALIKPFGQCYEFLTLHTVRKFFSPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDSIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNISQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMENMRQFSKEHPGFDPQTVRVGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPTLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRDVIQ
GSDDIATRAIDLLKEIYTNLGPKLLVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHIALVVRFPNQGRQVD
DLDIWSHTNDTIGSVRRSILSRIKANSTHTKVELFIGGEIVDPADDRRLIGQLNLKDKTL
ITAKLTQVSSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPKVESCLPGVIMSLHLRYISF
LWQIADLGCTLNMPLLRDGARVLMKLMPPDTTTVENLRAICLDHAKLGENSLSPTLDSRF
FGPSPSQVLYLTEVVYALLMPASGTLGDDASNFQFNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLMLTAIGFGHVKVVAEVCQPVVEGTNPASPINQATHDQALVLQN
ALQSIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQKIVWASGCGMVHL
VFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALLPTTLDMLSKEKAWQTFI
IDLLLHCQSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKHAGDYF
TLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTSETGVEETILEGHLGVTKE
LLAFQTPEKKFYIGCEKGGANLIKELIDDFIFPASNVYLQYVKSGEFPAEQAIPVCSSPA
SINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPPVGPRPTKGFVGLKN
AGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDIDDDMSGDEKQDNESNVDPRDDVFSYH
HQFDDKPSLNKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLR
EQHDALEFFNSLVDSLDEALKALGHPTMLSRILGGSFADQKICQGCPHRYECEESFTTLN
VDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFD
YDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDEVPLESQVIPEDLPEQTEPNGSS
RYRLVGVLVHSGQASGGHYYSYIVQRHGNGDDGQKDRWYKFDDGDVTECKMDDDEEMKNQ
CFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDAAGGDSELLKYISELTLAPRPN
QPKMPLAIEASVRKQNVQFMHSRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEE
IAMISIQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRSWFAHNVLFAFPTR
FSEYLLECPSAEVRGAFAKLIVVIAHFSLQDGPCPAPVTSPSASTQACDSVTLSDHLLRA
VLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPSTFMLVALDEGPGPPIK
YQYAELGKLYTVVSQLLRCCDVSSRMQSSINGNPPLANPYGDPNLAAPIMPLQQLVAEIL
FVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDL
LLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFTNCS
VAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQSNETSNGYFLER
SHSARMTLAKACELCPEEVSAQSVKPHQNTVLEPDDQEAPDEHDSSPPEDTALYPHSPGT
QYQQPNNHPHGQPYTGPAAQHMNNPQRPPQRPQESWEGTDEVPPVQTKE
NT seq
7710 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacccgcgggtcgcccgtggggggcaacgagagccagagccaagcgccc
gacggccagaaccaaaccctgctgccccagaaccagacgccctcaccaaactcctccaat
gagacgtcacccctcagtccaccagaggaaccgggtcagggagaagccccgcccgcacag
gaagaggaggagcctgccttcccccacacagacctggccaagctggacgacatgatcaac
cggccgcgctgggtggttccggtcctgccgaaaggagagctggaggttctgctggaagct
gctatagatctcagtaaaaaagggctggacgtgaggtgtgaggcctgtcagaggttcttc
cgcgatggcctgaccatctcattcactaaaatcctgacggacgaggccgtgagcggctgg
aagtttgaaatccacaggtgcatcatcaataacacccaccgcctgatcgagctctgcgtg
gtcaaactggctcaggattggttccctctgcttgaactgctcgccatggcgaccaacccg
cactgcaagttccacatttacaatggcacgcgtccgtctgagagcgtccctgcaggagcg
cagctcgctgacgatgagctgtttgcccggccgcccgaccctcgatctccgaaggggtgg
ctggtggacctcatcaataaattcggtacattgaacgggttccagattcttcacgatcgc
ttcatgagcgtccaggctctcaacgtgcagataatcgcagctctcatcaaacctttcggc
caatgttacgagttcctgactttgcacacggtgaggaagttcttctcacccgtaatcgag
atggttccgcagtttctggagaacctcacagacgaagagctgaagaaagaggccaagaat
gaggccaagaacgatgctctgtccatgatcataaagtccttgaagaacttggcgtctaga
gttcctggtcaagaggaaaccgtcaagaacttggagatcttccggttgaaaatgatcctt
aggttgttgcagatttcctcgttcaatgggaaaatgaatgcgctgaatgaagtgaacaag
gtgatctcaagcgtgtcgtattacacacaccggcacggcaacccagaggaagaggagtgg
ctgacggcggagcgaatggccgaatggattcagcagaaccacattctgtccatcgtgctg
agagacagtctgcaccagccgcagtatgtggagaagctggagaagatcctgcgcttcgtc
atcaaagagaaagctctgaccctgcaggacctggacagcatctgggcggctcaggctggt
aaacatgaagcgatcgtcaagaacgtccacgatttgttggccaagctggcgtgggacttt
tccccggagcagctcgaccacctgttcgactgcttcaaggcgagttggacaaacgcaagt
aaaaagcagcgggagaagctcctggagttgatccgcaggctggcagaggatgataaggat
ggagtgatggctcacaaagtgctcaacctactgtggaacttggctcacagtgacgacgtg
cctgtggacatcatggaccaggccctgagtgcccacatcaagatcctggactacagctgc
tctcaggaccgtgacacgcagaagatgcagtggatcgatcggttcatcgaggagcttcgg
acgaatgataagtgggtgattccggctctgaagcagatcagggagatctgcagcttgttt
ggagaagctcctcagaacatcagtcagacgcagaggagtccacatgtcttctaccgtcac
gatctgatcaaccagcttcagcacaatcacgcgctcgtcacgctggtggccgagaacctg
tctgcatacatggagaacatgaggcagttctccaaagagcatccagggttcgatcctcag
accgtgcgagtgggcagccggtacagccatgtacaggaagtgcaagagagactcaatttc
ctgcggtttctgctgaaggacggccagctgtggctctgtgctccacaggccaagcagatc
tggaagtgtctggcagagaacgccgtcttcctgtgcgaccgcgaggcctgctttaagtgg
tactccaaactcatgggtgacgagccagatctggacccggatatcaacaaggacttcttc
gagaacaacgtgctgcagctggaccccacgctgctgacggagaacggcatgaagtgcttc
gagcgcttcttcaaagccgtcaactgcagagagggcaaactggtggccaaacgccgggcg
tacatgatggacgacctggagctgatcgggctggactacctctggagggatgtgattcaa
ggcagtgatgacatcgccacacgggcaatagacctgctgaaagaaatatacaccaacctc
ggaccaaaactgctagtgaatcaggtagagatccatgaggacttcatccagtcgtgtttc
gaccggctcaaggcctcgtacgacacgctgtgtgtgctggacggagacaaggacagcatt
aactgtgccagacaggaggccatacgcatggtgcgagtcctcacggtgctcaaggagtac
atcaacgagtgtgacagcgactaccacgaggagaggaccatcctgcccatgtccagagcc
ttccgtgggaagcacattgcgctggtggtcaggtttcccaatcagggccgtcaggtggac
gacttggacatctggtcccacaccaatgacaccattggctccgtccgccgcagcatcctc
tctcgcatcaaagccaacagcacacacaccaaagtggagctgttcattggaggagagatt
gtggaccctgctgacgaccggcggctgattggacagctgaacctcaaagataaaactctc
atcacggcgaagctcacccaggtcagctccaacatgccctccagccccgacagctcgtcc
gactcgtccaccggctcgcccggaaaccacggcaaccactacagtgacgggccgaacccc
aaggtggaaagctgcttgccaggagtgatcatgtcgctgcatctgcgctatatctccttc
ctgtggcagatcgctgatctgggctgcaccttgaacatgccgttactgcgagacggagcg
cgagtgctcatgaagctcatgcctccagataccactacagtggagaaccttcgagcgata
tgtttggatcacgctaagctgggagagaacagtctcagtcccactctggattcacgcttc
tttggtccttccccttcacaagtgctctacctcactgaggtggtgtatgcgctgctgatg
ccagccagtggaactctgggagatgacgccagtaacttccagttcaacttcttgaagagt
ggcggtctgcctctcgtcctgagcatgctcactaggaacaacttcctccccaatgcggac
atggagacgagacgcggcgcctacctgaacgccctcaagatcgccaaactcatgctcact
gccatcgggttcgggcacgtgaaggtcgtcgcggaggtgtgtcagcctgtggtggaggga
accaacccagcctcgccgattaaccaggcgactcacgatcaggctctggtgctacagaac
gctctccagagcattcccaatcccgcctccgaatgcatgctgcgcaacgtggccatccga
ttggctcagcagatctctgatgagaacttcttccaggcctcaaagtacatcccagatatc
tgtgtgatccgagccgtgcagaagatcgtttgggcttcgggatgtggaatggtgcacctg
gtcttcagctcgaatgaagagattagcaagatctacgaaaagactaatgccggtaacgaa
ccggacgcggaagacgagcaggtgtgctgtgaggcgctggaggtcatgaccttgtgtttc
gctctgctcccgacgaccctcgacatgctcagcaaggagaaggcctggcagaccttcatc
atcgacctgctgcttcactgccagagcaaagctgtgcgtcagatggcacaggagcagttc
ttcctcatggccaccaggtgttgtatgggacacagacccctgctgttcttcatcacgctc
ctcttcacggttctgggaagtacggctaaagaaagagcgaagcacgctggcgattacttc
accctcttacgccacttactcaactacgcgtacaacagcaacataaacctgcccaacgca
gaggtgctgctcaacaacgagatcgactggctcaagagaatccgagatgaggtgaagagg
accagtgagacgggtgtggaagagaccattctcgagggtcatctgggcgtcaccaaagag
ctgctggcctttcagacgccagagaagaaattctatatcggctgtgagaaaggcggcgct
aatctaataaaggagctgattgatgatttcatcttcccggcgtctaacgtgtacctgcag
tatgtgaagagcggcgagttcccggcggagcaggccattccggtgtgcagcagtcctgcg
tccataaacgccggctttgagctgctggtggcgctcgctgtcggctgtgtgcggaacctc
aaacagatcgtcgacacgctcacagacatgtactatctaggttgcgaggcacttacagag
tgggagtatcttcctccggtggggccgcggccgaccaaaggcttcgtgggtctgaagaat
gcaggagccacatgctacatgaactccgtgatccagcagctgtacatgatcccgcccatc
cgaaacggcattctggccatcgaaggcaccggcagcgacatcgacgacgacatgtccgga
gatgaaaagcaggacaacgagagtaatgtggaccccagggatgatgtgttcagttatcat
caccagtttgatgacaagccctctctcaataaggccgaggaccgcaaggagtacaacatc
ggagtgctgcggcatctgcaggtcatcttcggtcacctggcggcatcccgtctgcagtac
tacgtgcccaggggattctggaagcagttcaggttatggggggaaccggtgaatctgaga
gagcagcacgacgcgctggagttcttcaattccctggtggacagtctggatgaggcactg
aaagccctcggccatcccaccatgctcagcaggatcttgggtggctcgtttgcagaccag
aagatctgtcagggttgccctcacaggtatgagtgtgaggagtccttcacaacgttgaat
gttgacatcaggaaccaccaaaacctcctcgactctttagaacagtacgtcaaaggggat
cttctggaaggagccaacgcttaccactgtgagaagtgtaacaaaaaggtggacacagtg
aaacgtctcctcataaagaaactcccgcccgtgttggccatccagctgaagcgcttcgat
tacgattgggagcgcgagtgtgcgattaagttcaacgattacttcgagttccctcgtgag
ctggacatggagccctacacggtggcaggcgtggcgaagctagagggtgacgaggtgccg
ctggagagccaggtcatccctgaggacttgccggagcagaccgaacccaacggcagctcc
cgctacaggctcgtgggcgtgctggtgcactcgggtcaggccagcggcggacactactac
tcttacatcgtccaacgtcacggaaacggtgacgacggacaaaaggaccgctggtataag
tttgatgacggtgacgtaacggagtgtaagatggacgatgatgaggagatgaagaaccag
tgctttggtggagagtacatgggcgaggtgtttgaccacatgatgaagcgcatgtcgtac
aggcggcagaagcgctggtggaacgcctacattctgttctacgagcgcatggacgcagca
gggggcgacagcgagctgttgaagtacatttccgaactgacgctcgcgccccggccgaac
cagcctaaaatgcccttggccatcgaggccagcgtgcgcaagcagaacgtccagttcatg
cacagccgcatgcagtacagcctcgagtacttccagttcatcaagaaactgctgacctgc
aacagcgtctacctgaaccctcctccaggtcaagatcaccttctaccagaagctgaagaa
atagcgatgatcagtatacagctcgctgctagatttctgtttagcaccggattccacaca
aagaaagtcgtgcgaggccctgcgagtgactggtatgacgccttgtgcatcctgttgcgt
cacagcaagaatgtccgcagctggttcgcacacaacgtgctgtttgccttccccacgcgg
ttctcggagtacctgctggagtgtccgagtgcggaggtccgtggagcttttgccaagctc
atagttgtcatcgcacacttttccctgcaggacggaccatgtcctgctcccgtcacgtcg
cccagcgcgtccacacaggcctgtgacagtgtgaccctgagtgaccacctgttgagggcg
gtgctgaacttactgaggagggaagtgtccgaacacggccgccaccttcagcagtacttc
aacctcttcgtcatgtacgccaacctgggtctggcagaaaagacacagctgctgaagtta
agtgtgccgtccaccttcatgttggtggcactggacgagggtcccggccctcccattaag
tatcagtacgcggagctcggcaaactctacacggtggtgtcgcagctgctgcgctgctgt
gatgtgtcgtcacgcatgcagtcctccattaatgggaacccaccactggccaacccgtac
ggcgaccccaacctcgcggctcccatcatgcccctgcagcagctggtggccgaaatcctg
tttgtgcgcaccagctacgtgaagaagatcatcgaggactgcagcaactctgaggagacg
gtgaaactgctgcgcttctgctgctgggagaacccacagttctcctccacggtcctcagc
gagctgctctggcaggtggcgtattcctacacctatgagttgaggccttacctggatcta
ctgctccagatccttctgattgaggactcgtggcagacgcacaggatccacaatgttttg
aagggcattcctgatgaccgagacgggctctttgacaccatccaacgctccaagaaccat
tatcagaaacgggcctatcagtgcattaaatgcatggtggcgctcttcaccaactgctct
gtggcttatcagatcctacagagtaacggggacctgaagaggaagtggacgtgggcagtg
gaatggctgggcgatgagctggagcgcaggccatacactggaaaccctcagtacagctac
aacaactggtccccacccgtacagagcaacgagacgtccaacggatacttcctggagcgc
tctcacagcgcccgcatgacactggccaaggcctgtgagctctgtcctgaagaggtgagc
gctcagtcagtcaaacctcaccaaaacacagttctggagccagacgatcaggaagcgccc
gatgagcacgactcgtcgccccctgaagacacggccctctatcctcattctccagggacg
cagtatcagcagcctaataaccatcctcacgggcagccctacaccggcccggccgcccag
cacatgaataacccacagcgaccccctcagaggcctcaagagagctgggagggaaccgac
gaggtccctcccgtccagactaaagagtag
DBGET
integrated database retrieval system
