Ctenopharyngodon idella (grass carp): 127514500
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Entry
127514500 CDS
T08802
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127514500
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127514500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
ATP-synt_B
GPHH
FraC
SieB
Motif
Other DBs
NCBI-GeneID:
127514500
NCBI-ProteinID:
XP_051753349
LinkDB
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Position
6:complement(24112600..24173275)
Genome browser
AA seq
1969 aa
AA seq
DB search
MAAQLLAPPGPDSFKKFTPESLANIEKRIAEEKKKKPVKPRSDSSHRDDDDDNKPKPNTD
LEAGKSVPFIYGDVPSKMLAVPLEDLDPYYMNKKTFIVLNKGKTIFRFSATPSLYIISPF
NLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLTKIV
ARGFCIDDFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINSTETYLANGSK
GFDFNEYIMNDTNFYFLPGMLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGW
AFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATMEEAEQKEAEFKAMLEQLKKQQEEAQANAMATSAGTVSEDAVEDDGGGHLSRSSSEV
SKLSSKSAKERRNRKKKWKKEQEEKGDSEKVVKSESDDGSKRSRFRFRDNRLGRKASIMN
QSLLSIPGSPFMSRRSSIFSFKGSENEFADDEHSTVEESEDRRGSLFVPYRRSSYSGYSQ
GSSRINPLAPHPGCKRNSTVDCNGVVSLIGPGPGRLLPEVKIDKAASDDSTTEVEGKRKH
SGSLMVSVDQLNTSFSRKERANSAMTVVTNTLVEELEESQRKCPPCWYKFANTFLIWECC
PIWIKIKEIVNLIVMDPFVDLAITICIVLNTVFMAMEHYPMTPHFEEVLSVGNLVFTGIF
TAEMFAKLIAMDPYYYFQEGWNIFDGFIVSLSLVELGLADVEGLSVLRSFRLLRVFKLAK
SWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAESCELPR
WHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALL
LSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWFKIHVRLLVAHILKKKPLEDEDKPLD
DMYDKKLNLMGNHTGVDIKCGDLIYPKNGNGTTSGIGSSVGKYMIDEEPMSFIHNPNLTV
RVPIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDEEEMAVVEVVEEY
LDPEACWTDACVARYKCCDVPITEGWGKYWWFLRKTCYLIVEHNWFETLIIFMILLSSGA
LAFEDVYIEQRKTIQIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDV
SIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVC
LIFWLIFSIMGVNLFAGKYYYCFNETSEEYFKSDVVNNKTECFALINANYTEVRWKNVKI
NFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEDQPIYEDNIYMYIYFVIFIIFGSFF
TLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGM
VFDFVTQQAFDISIMMLICLNMVTMMVETDDQSDETENILYWINFIFIVSFTSEFVLKLF
ALRHYYFTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGA
KGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKREVGIDDMYNFETFGNS
MICLFMITTSAGWDGLLAPILNYPPDCNPEKENPGTTVKGDCGNPSVGIFFFVMYIIVSF
LIVVNMYIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPDASQFITFAKLPDFADT
LEHPLRVPKPNIIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFV
AANPSKVSYEPITTTLRRKQEEVSAVVIQRAYRSHLARRGFICKRRSANNKLENGGANQE
KKEGTPSTASLPSYDSVTKPEKEKQDDNNEGKGRKEKGRNQKDVRESKC
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcagctgcttgcacctccaggccccgatagcttcaagaagtttaccccagag
tctttggccaacatcgagaagcgcatcgctgaggaaaagaaaaagaagcctgttaagccc
agatctgacagcagtcaccgtgatgacgatgatgacaacaaaccgaagcccaacactgac
ctggaagcggggaagagcgtgccctttatttatggggacgtcccctccaaaatgctggcg
gtgcccctggaggacttggacccctactatatgaacaagaaaacctttatagtgctaaac
aaaggaaaaactatcttccgtttcagtgccacgccctcgttatatatcattagtcctttt
aacctattcaggcgaatagcaattaaaattttgatacactcagttttcagcatgatcatc
atgtgtacaattttgacaaattgtgtcttcatgacattcagcaatcctccagaatggtcc
aaacaagtagaatacaccttcacaggaatctacacttttgagtcactcacaaaaattgtg
gctcgaggtttctgtatagatgacttcaccttcctcagagacccatggaactggctggat
ttcatggtcatctctatggcatatgtaacagagtttgtggacctcgggaatgtgtcagcc
ctgagaaccttcagggttctacgagctctcaaaactatttctgtcataccagggctgaaa
accattgtgggtgctctgatccagtcagtgaagaagctgtcagatgtgatgattctgact
gtgttctgtctgagtgtatttgccctcatcggtctacagctgtttatgggtaatcttcgg
caaaagtgtgtcatctggccaatcaatagtactgaaacctacctggccaatgggagcaag
ggctttgacttcaatgaatacatcatgaatgacacaaacttctacttcctgccaggcatg
ctggatgcgctgctatgtggaaacagctcagattcagggcggtgtccggagggctatact
tgcatgaaggctggacgcaacccaaactatggctacactagctttgactcctttggttgg
gcttttcttgctctcttccgactcatgacacaagacttctgggagaatctgtaccaactg
actctgagagccgcggggaagacgtacatgatctttttcgtacttgtgatctttgtggga
tcgttctacctggtgaatctgatcctggctgtggtggccatggcttatgaagaacaaaac
caagccacaatggaggaggcagaacagaaggaggctgaattcaaagccatgctggaacag
ctgaagaaacaacaggaggaggcacaggccaatgctatggcaacctcggcaggtacagta
tctgaagatgcagtagaggacgatgggggagggcatctgtcccgcagttcctctgaggtg
tccaagctgagctctaagagcgccaaggagcgaaggaacagaaagaaaaagtggaagaaa
gagcaggaggagaagggtgacagcgagaaggtggtcaagtcagaatccgatgacggcagc
aagaggagccgcttccgttttagagacaacaggcttgggcggaaggcctcaatcatgaac
cagtccctgttgagtatccctggctcgcccttcatgtcccgccgcagcagtatattcagc
ttcaagggctcggagaacgagtttgcggacgatgagcacagcaccgtcgaggagagcgaa
gaccgccgcggctctctctttgtcccatataggcgcagcagctacagcggctacagccag
ggttcctcacgcattaacccactggcaccccacccaggttgcaagagaaacagcacggtg
gactgcaatggcgtggtctctctgatcgggcctgggcccggccggctactgcctgaggtg
aaaatagataaggcagcttctgatgacagtaccacagaggtggaggggaagagaaaacac
tcaggttctcttatggtgtcagtggaccagctcaatacttcctttagccggaaagagcga
gccaatagtgcaatgactgttgtaactaacacactggtggaagagctggaggagtctcag
agaaaatgtccgccctgctggtataagtttgccaacacattcttgatatgggagtgctgt
ccgatctggataaaaataaaagaaattgtcaacctcatagtgatggatccatttgtagac
ctggctattactatatgcattgtgctgaacacagtcttcatggccatggagcattatcct
atgacaccacacttcgaggaggtgctttctgttggaaacctggtgttcacaggtatcttc
acagctgaaatgtttgcaaagctgatagccatggatccatactactacttccaggagggc
tggaatatctttgatggcttcattgtgagcctgagtttggtggagctggggctggccgat
gtagagggattgtctgtgctcagatccttcagattgctgagggtgtttaagctggctaaa
tcatggcccactctgaacatgctgataaagatcattggtaactctgtgggagctttggga
aacctgaccctggtgctggccatcatcgtcttcatctttgctgtggtgggcatgcagcta
tttgggaagagctataaagactgtgtgtgtaagatcgcagagagctgtgagctgccccgc
tggcacatgaacgactttttccactcctttcttattgtgttccgggtgctgtgtggagaa
tggatcgagaccatgtgggactgtatggaggtggctggacaaacaatgtgtctcactgta
ttcatgatggtgatggtcattggaaacttggtggtgctgaacctgttcttggccttgctg
ctcagctctttcagtgctgataatctggcagccacagatgatgacggtgagatgaacaac
ctgcagatttcagtgatccgcattaagaagggtatcgcttggttcaaaattcacgtacgt
ctcctggtggcccacatcctgaagaagaaacctttggaagacgaagacaaacctcttgat
gacatgtatgacaaaaaactcaacctcatgggtaaccacactggtgtggacatcaaatgt
ggtgatctgatttaccccaagaatggtaatggcaccacaagcggcattggtagcagcgta
ggaaaatacatgattgatgaggagcccatgtccttcatacacaaccccaacctaacggta
cgggttcccatcgctgtaggagagtcagactttgagaacctcaacacagaggacttcagc
agtgagtcggatgtggaaaatagcaaagatctggatgacaccagctcttccgagggaagt
actattgacataaagcctgacgaggaggaaatggctgtagtggaggttgtagaggaatac
ttggacccagaggcctgctggactgatgcctgtgtggcacgatacaaatgttgtgacgtg
cctattactgagggctgggggaagtactggtggtttctgaggaaaacttgctacctcatt
gttgaacacaactggtttgaaacactcatcatttttatgattcttctcagctctggagct
ctggcatttgaagatgtatacattgaacagaggaaaaccatccagatcattctagaatat
gcagacagagtcttcacatacatcttcatcctggaaatgttgctgaaatgggtggcctat
gggttcgtcaaatacttcaccaatgcatggtgctggctggacttcttcattgtggatgtg
tctatagtcagccttatagctaatgcgctgggctactcagacttgggccccataaagtcc
ctgaggactttgagggctctcaggcccctgagagctttgtcccggtttgagggcatgagg
gttgttgtgaatgctttagtgggtgccattccctccattatgaatgtgctgttggtgtgt
ttgatcttctggctgatcttcagtattatgggtgtcaacctgtttgctgggaagtactat
tactgcttcaacgagacttcagaggagtattttaaatctgacgttgtcaacaacaagaca
gaatgctttgctctcatcaatgcgaactacacagaagttcgctggaagaacgtgaagatc
aacttcgataatgtaggcgcaggttacctggcactcttgcaagtggccacattcaaaggc
tggatggacatcatgtatgctgctgtggattctagaaaggttgaggaccagcccatctat
gaggacaacatctacatgtatatttattttgtcatcttcataatcttcggctccttcttc
actctaaatctattcattggtgtcatcattgacaacttcaatcaacagaagaaaaagttt
ggaggtcaggatatcttcatgacagaagaacagaaaaaatactacaatgctatgaagaaa
ctgggatcaaagaagccacagaaacctatccctagacctctgaacaaaatccaggggatg
gtatttgactttgtcactcagcaggcctttgacatttccatcatgatgctcatctgtctt
aacatggtaaccatgatggtggaaacagatgatcagtcagatgagacagagaacatcttg
tactggataaacttcatatttattgtgtccttcactagcgagtttgtcctgaaactcttt
gctctgcgacactactatttcaccaatggttggaacatctttgactgcgttgtcgtcatt
ctgtccattgtgggtatgttcctggctgacctcattgaaaagtactttgtatcaccaact
ttgttcagggtcatccgtctggctcgaattggccgcatcctccgactaatcaaaggagct
aagggcatccggacattactgtttgctttgatgatgtcacttcccgcactgttcaacatc
ggcctgttgcttttccttgtcatgttcatcttctccatctttggcatgtctaactttgcc
tatgtgaaacgagaagtaggaattgatgacatgtataactttgaaacctttggcaacagc
atgatctgtctattcatgatcaccacatcagcagggtgggatggcctcttggctcctatc
ttgaactatccgcctgattgcaacccagagaaggagaacccaggaaccactgtaaagggc
gactgtggcaatccctcagtgggaatcttcttctttgtaatgtacattattgtgtccttc
ctgattgtggtgaacatgtacatcgctatcatcttggagaacttcagtgttgccactgag
gagagtgctgatccactgtgcgaagacgactttgagtccttctatgaaatctgggagaaa
ttcgaccccgacgcttcgcagttcatcaccttcgccaagctgccagactttgcggataca
ttagaacatcctctccgtgtgccaaagccaaacatcatcgagctgatcgccatggacatg
cccatggtgagtggcgaccgcattcactgcttggacattctgtttgcctttacgaagcgc
gtgctaggcgacagcggcgacctggacatgatgcgacagcaaatggaggaacgcttcgtg
gcggcgaatccctccaaggtgtcgtacgagcccatcaccaccacgctgcggcgtaagcag
gaggaggtgtcggctgttgtgatccagagggcataccgttcccacctggcgcgcagaggc
ttcatctgcaaacgcagatctgccaacaacaaactggagaacggaggggccaatcaggag
aagaaagagggcacaccttccactgcatccctgccatcctatgacagtgtaaccaagccc
gagaaggagaagcaggacgacaacaatgaaggcaagggccgcaaggagaaaggccgaaac
caaaaagacgtcagggaatccaagtgttaa
DBGET
integrated database retrieval system
