Ctenopharyngodon idella (grass carp): 127514632
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Entry
127514632 CDS
T08802
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127514632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127514632
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
127514632
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GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
127514632
NCBI-ProteinID:
XP_051753637
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All DBs
Position
6:complement(6571997..6588309)
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AA seq
315 aa
AA seq
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MEAALFALPWMPVNIGGSDLLAKAWFGDTQYRILLSDLSTVWEEEMNADDIQSRAQDLNK
RLRAPTQAFFSHLCSVARPSFSSQDDDQTSAAHVALERHGDNLTVKLKSELAGLPFYWEF
RCTTTPVAVVCRQLVRPLLAVSRVLQRQVEDLAALLAQKDAEIQDYQENGAVLSRARLQT
EPFDVHQYRENFFTQIVPQMGVTLDSLGFDSELQALYMAVSSEKTGQKRKRSPDSCPALE
DNDVAEYHVPENLQITDFPTGVASSLASQEQNYGSSGRPLVANSKQTVPLPSTAAGSEER
STSRAKKKKAVGLFR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagccctgtttgccctcccatggatgccagtgaatattggtggttctgatctc
ctggctaaagcctggttcggtgacacacagtaccggattctgctgagtgacctgagcact
gtgtgggaagaagaaatgaacgcagacgacatccagagtcgagcacaggatctgaataag
cgtctaagggcaccaacacaggcttttttctctcatctgtgttctgtggcacggccttct
ttctccagccaagatgatgatcagacatctgctgcacacgttgctcttgaaaggcatgga
gacaatctaacagtcaaactcaaaagtgagctggctgggttgccgttctactgggagttc
cgctgcaccacaacacctgtagccgtggtgtgcaggcagctggtgcgccccctgctggca
gtgagtagagtcctgcagcggcaagtggaggatctggctgctcttttggctcagaaggat
gcggagatacaggactatcaggagaacggagctgtcctgagtagagccagactacaaaca
gagccgtttgacgtgcaccagtacagggagaacttcttcacacagattgttccacagatg
ggtgtgacgctggacagtttgggttttgactcagagttgcaggccctgtacatggccgtg
agctcggagaaaacgggtcagaaacgtaaacgttctcctgacagctgccctgcgttagaa
gacaacgacgttgctgaatatcacgtacctgaaaacctacaaatcactgatttccccaca
ggtgtggcatcttcactggcttctcaagaacagaattatggatcatcaggaagacctctg
gtggcaaacagtaaacagactgtcccgttaccttcaactgctgctggttctgaggaacgt
tccacctcacgggcgaagaagaagaaagcagtggggcttttccggtga
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integrated database retrieval system
