Ctenopharyngodon idella (grass carp): 127514686
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Entry
127514686 CDS
T08802
Name
(RefSeq) integrin beta-7
KO
K06590
integrin beta 7
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04514
Cell adhesion molecule (CAM) interaction
cide04672
Intestinal immune network for IgA production
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127514686
04514 Cell adhesion molecule (CAM) interaction
127514686
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127514686
09142 Cell motility
04820 Cytoskeleton in muscle cells
127514686
04810 Regulation of actin cytoskeleton
127514686
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127514686
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127514686
04515 Cell adhesion molecules [BR:
cide04515
]
127514686
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127514686
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin beta subunits
127514686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_2
EGF_TEN
EGF_integrin
EGF_Teneurin
I-EGF_1
VWA_4
vWA_SIBA-E
EMP70
Motif
Other DBs
NCBI-GeneID:
127514686
NCBI-ProteinID:
XP_051753732
LinkDB
All DBs
Position
6:complement(24276769..24292453)
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AA seq
766 aa
AA seq
DB search
MKAVVIAVTVLFHCIQGQEPLCQSQPSCSECIRSPGCAWCTQTDFLKSGESNERRCDSPE
SLKARSCKEDHVINPVKHPLTNVKNSKLSNDSDNVVQLKPQNINITLRVGVPFEFTIEFR
RAQGYPIDLYYLMDLSYSMKDDLEQIKTLGQKILKKLKEITSTVRIGFGSFVDKEMLPYV
SQVKARRQNPCPNRIDTCQPAFTFQNVLPLTSDAKEFEREVSKQNISGNLDSPEAGLDAI
MQAAVCKEKIQWHDVTRILVYTSDDTFHMAGDGRLGGVFQPHNGQCHLNDNGSYNGRAYD
YPSVGHVSKVLQDNNIQLIFAVTEDIYPAYKALSALIPQSVVGVLKKDSSNVVDLISDAY
RNLSSTLVLEQEGAPKELDVSYRSACKGDQSDTEWKAKGECQDIKHEKITFRVRLNASAC
LKEPQTFRIKMQGISEEVKITVHTECHCDCGAPEKASSHCNGTGTLSCGVCSCDEGYLGQ
QCECVQQSDADSTFKMLASCQPDNSSLVCSGHGICQCGKCVCQGHYSGDYCQCDANSCER
NNGKLCNDKGICDCGQCICKENYTGPGCQCSPSQDKCMNDKGLCSGQGKCICNNCVCNKG
FMDHDCSTLISACSEFKECVECHVEAGTSDATNCAAKCLDAKISRLDGTHELDCTYKDAV
SYKVELGANGIIILQYADLPRSIDKTTVIIGSSVSGIILIGIIIIIIYRVLLELYDIREY
QNFVRAQKQTEWKEVQNPLFKGATTTVLNPLHMQNDENAKQHSEII
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgttgtgatagctgtgacagttctctttcactgtatacaagggcaggaacca
ctttgtcaatctcaaccttcatgttctgaatgcataaggagtcctggatgtgcgtggtgc
acacagacggactttttgaaatcaggtgagtctaatgaacgacgctgtgattctcccgag
tctctgaaggccaggagttgtaaagaggatcatgtgatcaatcctgtaaaacatcccttg
accaatgtgaagaacagtaagctcagcaacgactctgataatgtggtccagctgaaacct
cagaatatcaacattacactcagagttggagttccatttgaattcacaattgagtttagg
agggctcagggttaccctatagatctgtactacctgatggatctgagctattccatgaaa
gatgatctggagcaaattaaaactctggggcagaaaatcctcaagaagctgaaggaaatc
acaagcactgtccggattggttttgggtcttttgttgataaggagatgttgccatatgtc
agtcaggtgaaggcaagacgtcagaacccctgccctaatcgtatagatacctgccaacct
gctttcacttttcagaatgtcctgccgctgactagtgatgctaaggagtttgaacgagaa
gttagcaaacagaacatttctggtaacctggactctcctgaggctggtctggatgccata
atgcaggcagcagtctgtaaggagaaaatccaatggcatgatgtgacacggattttggtt
tacacatctgatgatactttccacatggcaggagatggacgattaggtggtgtctttcag
ccacataatggacagtgtcatcttaatgataacggttcctataatggaagagcctatgat
tacccatcagtgggccatgtatctaaagttctgcaggataacaatatacagctcatattt
gctgtgactgaggacatctatccagcatataaggcattgagtgcattgattcctcagtca
gtggttggtgtattaaagaaagactctagtaatgttgttgatctcatctctgatgcctat
aggaatttgtcatccacgctggtgttagagcaggagggagctccaaaagaactggacgtg
tcctacaggtctgcatgtaaaggggatcagagcgatactgaatggaaggcgaaaggagaa
tgtcaagacatcaagcatgagaagattacgttccgagtacgtttgaacgcatctgcatgt
ctgaaggagccacagacatttcggatcaaaatgcaaggtatcagtgaggaagtgaagatc
acagtgcatacagagtgtcactgtgactgtggtgctccagagaaggcttccagtcactgt
aacggtacaggaacgctctcatgcggcgtgtgcagctgtgacgaagggtatttgggtcag
cagtgcgagtgtgtgcaacagagtgatgcagactctaccttcaaaatgctggcgtcctgt
cagcctgacaacagctcgctggtgtgcagtgggcatggcatctgtcagtgtggcaagtgt
gtgtgtcaaggccactacagtggtgattactgccagtgtgatgccaatagttgtgaacgc
aataatggaaagctctgtaatgacaaaggaatatgcgactgtggacaatgtatatgtaaa
gaaaactacacagggcctggttgccagtgctcgcctagccaggacaagtgtatgaatgac
aaggggctttgcagcggtcaaggcaaatgcatttgcaacaattgtgtgtgtaacaaaggc
ttcatggatcatgactgctctacattaatcagcgcttgctcggagttcaaggagtgtgtg
gaatgtcatgtggaagctggtacttctgatgccactaattgtgctgcgaagtgtttggat
gctaaaatatctcgtcttgatggcactcatgagctggattgcacatataaagatgccgtt
tcgtacaaagtggaacttggtgctaacggcataattatacttcaatatgcggacctgcct
cgttccattgacaagactacagttataattggcagctctgtgtcaggcatcattttaatt
ggcattataataatcattatataccgtgtcttgctggaactgtatgacattagagaatat
cagaactttgtcagagcacagaaacagactgaatggaaagaggtccagaatcctcttttc
aaaggtgccacaacaacggtgcttaaccctttgcatatgcaaaacgacgagaatgcaaag
caacattctgagattatttaa
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