Ctenopharyngodon idella (grass carp): 127514912
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Entry
127514912 CDS
T08802
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127514912
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127514912
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127514912
NCBI-ProteinID:
XP_051754137
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Position
6:6797680..6798858
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AA seq
239 aa
AA seq
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MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKTLIKKDRYHFNVTYNLGDSDPLKSARLPGDALTDTL
SAEKTSVAAATRVFFSHHHLSANPYPFLDLSSKMTELPPAPFPHYSLLGYPGGVSAFPGM
GVLAGAPHAHPSPGNPGHMVPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEPYLTYAATI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgttaagcgtcctatgaacgcttttatggtgtggtcgaga
gcccagagacggaagatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgcctcggaggcgaatggaagctcttgtcagactctgaaaaaagaccttttatcgacgaa
gccaaacgacttagagccgttcacatgaaagaacacccggattacaaatacagaccgcgc
cgaaagcccaaaaccttgatcaaaaaagacaggtatcattttaatgtgacgtataatcta
ggtgacagcgacccgttgaaaagtgcgcggttacctggtgacgcgctcacggacacgctg
agcgcggagaaaacgtctgttgctgctgctactcgggtgtttttcagtcaccaccacctg
tccgccaacccctatccgtttctcgacctgtcctccaaaatgacggaattaccccctgca
cctttcccacattattctttgctcgggtatcccggtggagtctccgcgtttcccggcatg
ggtgttctggccggtgcgccacacgctcatccgtctccgggtaacccgggccacatggtg
ccctataactgcctgggctggccgggttctggacctgctgttccttcgtcttacgtgctt
ttaccaggaatgaccaaagctcagcatgaaccttacctcacttatgccgcaacgatatga
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integrated database retrieval system
