Ctenopharyngodon idella (grass carp): 127514949
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Entry
127514949 CDS
T08802
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04810
Regulation of actin cytoskeleton
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127514949
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127514949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127514949
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127514949
Factors involved in mRNA localization
Other mRNA localization factors
127514949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
127514949
NCBI-ProteinID:
XP_051754195
LinkDB
All DBs
Position
6:23167765..23209604
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AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSLIYQPNFNTNFEDRNAFVTGIARYI
EQATVHSNMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYDELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGTNSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWSCTSAGSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQESQKTDSEYRKLFDLALQGLQLLSQWSAQVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLREPLRQAIKRKKNVVQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILEIKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRAECKNQGANISWPSSNRYETLLKQRHVQLLGRSIDLNRLITQRVSSALYKSL
ELAINRFESEDLTSIMELEGLLEINRMTHKLLSKYLTLDSIDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IYGLYRNFLGPPHIKAICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRGYLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIITLLGQHRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMGERIRKFQILNDEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagtgactctggaagatgctctgtccaatgtggacctgctggaggagctg
ccgctcccagatcagcagccctgcatcgagcctctgccctcgtccctcatttaccagccc
aactttaacaccaattttgaggaccgcaatgccttcgtgacaggcatcgcccgttacatc
gagcaggccactgtccactccaacatgaatgagatgttagaggaaggacaggagtatgct
gtaatgctgtatacatggagaagctgttcaagagctatccctcaggtgaagtgtaatgaa
cagcctaacagagtagagatctatgagaagacagtggaggtgctcgagcccgaggtcacc
aaactaatgaacttcatgtactttcagaggacagcaatagatcgcttctgtggggaagtg
cggcgtctttgtcacgccgagcggaggaaggactttgtgtctgaagcctatctgctcacg
ctggggaagttcatcaacatgtttgcggtgctggacgaacttaagaacatgaagtgcagc
gtcaaaaatgatcactccgcctacaagagagctgcccagttccttagaaaaatgtccgag
ccgtcctccattcaggaatctcagaacttatccatgtttctggccaatcacaacaagatc
actcagtccctacagcagcagcttgaggtgattaacggatatgatgagctgttggcagac
attgttaacctgtgtgttgactactacgagaacaagatgtacctcacccccagtgagaaa
cacatgctactcaaagtgatgggctttggtctctatctcatggatggaaccaacagcaac
atctacaaactggatgccaagaagagaatcaacctcacaaagattgacaagtttttcaag
caattgcaggtagtgcctctgtttggtgacatgcaaattgaactggcccgctatatcaaa
accagcgcccactatgaggaaaacaagtctaggtggtcgtgcacatctgcaggcagtagt
ccacagtataatatctgcgagcagatgattcaaatccgtgaagaccatatgcgcttcatt
tctgagctggctcgctacagcaacagtgaggtggtgaccggatcagggcgtcaagagtct
cagaagactgactctgaatacaggaaattgtttgatctggctctgcagggcctgcagctg
ctctctcagtggagtgctcaggtcatggaagtgtattcctggaaattggtgcaccctaca
gataaatactccaacaaagaatgcccagacaatgctgaggagtatgaacgtgccaccaga
tacaactacaccagcgaggagaagtttgctctggtggaggtcattgcgatgataaagggc
ttgcaggtgctgatgggccgaatggaaagcgtgttcaaccacgccatccgtcacaccatc
tattcagctctgcaagactttgcccaggtcacgcttagagaaccgctgcgtcaggctatc
aagaggaagaagaacgtcgtccagagtgtcctccaggccatccgtaagaccatctgtgat
tgggagacgggcagagagccacataatgacccagcgctgcggggcgagaaggaccctaaa
gggggatttgatatcaaagttcctcgtcgtgccgtaggaccctccagtactcaactgtat
atggtcaggaccatgctggagtctttggtcgctgataagagcggctcaaagaagactctg
cgcagtagtcttgaaggaccaaccatcctggacatagagaagttccatcgtgaatcattc
ttctacactcatctgctcaacttcagtgagacactgcagcagtgctgtgatttgtcccag
ctctggttccgtgagttctttctggagctcacaatgggccgccgcatccagttccccatt
gagatgtccatgccctggatcctcactgaccacatcctcgagattaaagaggcctctatg
atggagtacgtgttgtattcactggatctgtacaacgacagcgcacactacgctctcaca
aagtttaaaaagcagttcctttatgatgagattgaagctgaggtgaatctctgctttgac
cagtttgtctacaaacttgctgatcaaatttttgcctactacaagattcttgctggaagt
ctcctcctggataagagactaagagctgaatgtaagaatcaaggtgccaacatctcgtgg
ccttcctccaatcgttatgagacgctgctcaaacagagacatgtacagctccttggacga
tcaatcgacttgaaccgcctgatcacccagcgagtgtcctcggcgctttacaaatctcta
gagctagccatcaaccgttttgagagcgaggaccttacttccatcatggagttggagggt
ttactggagataaaccggatgacccacaagctcctcagtaagtatttgacactggacagt
atcgacgcaatgtttcgcgaggcaaaccacaacgtatccgcaccctatggcagaatcaca
ctccatgtcttctgggaactcaactatgacttcttgcccaactactgttacaacggctcc
acgaacagatttgttcgcactgtactgccgttttcacaagagtttcaaagagacaagcct
cccaacgcccagccacaatacctatatggctcaaaggccttgaatttggcatacagtagc
atatatggcctctaccggaacttcctgggacctccacatattaaggctatttgtagactt
ctgggataccagggaatcgctgttgtgatggaagagctgttaaaggtcgtcaaaagcctg
cttcagggcaccatcctgcagtatgtgaagaccctcatggaagtgatgcccaaaatatgc
cgtctgcctcgccacgagtatggttcgccaggaattctggagttctttcaccaccagttg
aaagacattgtggagtatgctgagctgaagaccgtgtgcttccagaacctgagggaagtt
ggaaatgcagtgctcttctgccttctgagtgaacagagcttgtctcaagaggaggtgtgt
gacttgttgcatgcagcgcccttccagaatatcttgccaagagttcacgttaaagaaggt
gaacgtctggatgcaaagatgaagcgtttggaggccaaatacacagcactgcatttggtg
cctctaattgagcgtctgggaacccctcagcaaattgccatcgcccgtgagggtgacttg
ctgactaaagaacggctgtgctgcggtctctccatgttcgaggtcattctgactcggatc
cgcggttatctggatgacccgatctggcgcggcccattgcccagcaatggcgtgatgcac
gtggatgagtgcgtggagtttcacaggttgtggagcgccatgcagtttgtgtactgcatc
ccggtgggagctcacgagttcaccgttgagcaatgttttggagatggtctcaactgggcc
ggttgcatgattatcacattactcggtcagcacagacgctttgatatcctggacttcagc
taccatctcctgaaggtgcagaaacatgacggcaaagatgaaatcatcaagagtgtgcct
ctaaagaaaatgggtgaacgaattcgcaagttccagattctgaatgatgaaatcttcgcc
attttaaacaagtacctgaagtctggggatggagagaacatgccagtagaacatgtccgt
tgctttcagcctccgatccatcagtcattggccagtaattga
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