Ctenopharyngodon idella (grass carp): 127515118
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Entry
127515118 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase arih1l
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127515118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127515118
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
127515118
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
127515118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
Rcat_RNF216
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
UBA_ARIH2_N
Motif
Other DBs
NCBI-GeneID:
127515118
NCBI-ProteinID:
XP_051754333
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All DBs
Position
7:complement(32577654..32592402)
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AA seq
537 aa
AA seq
DB search
MDSDEGYNYEFDDEEEEEEEEEECSEDSGEEEAEDDTLDLGEVELLDPAMAGGEPDDCVD
TGGSGGEGGLGPGQEDEDYRFEVLTTEQILQHMVECIREVNEVIQNPATITRILLSHFNW
DKEKLMERYFDGNLDKLFTECHVINPSKKAKMRPMSTRSSSQDLPCQICYLNYPNSYFTG
LECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQH
LITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWL
RKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWE
PHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQ
KMEEMQQHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLEN
ATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggctataattatgagtttgatgatgaagaggaggaggaagaagag
gaagaggagtgcagcgaggacagtggcgaggaagaggccgaggatgacacactggacctg
ggcgaggtggagctgctggaccccgccatggccggaggagagcccgacgattgcgttgac
accggcggcagcggcggcgaaggcggcctggggcctggccaggaggacgaggactaccgc
tttgaggtgctgaccaccgagcagatcctccagcacatggtggagtgcatcagggaggtt
aacgaggtcatacagaacccagctacgataaccagaatactcctcagtcacttcaactgg
gacaaagagaagcttatggagaggtactttgatgggaatctggacaagttgtttacagag
tgccacgtcataaaccccagtaaaaaggccaaaatgcgaccaatgagcacacggtcctcc
agtcaggatttgccctgccagatctgctatctcaactatccaaactcgtatttcacaggt
ctcgagtgtggacacaagttctgcatgcagtgctggggtgactatttaactaccaaaatc
attgaggaagggatgggacagaccatctcgtgtcctgctcacaactgtgacattttggtt
gacgataacactgtaatgcgactaatcacagattctaaagtgaaattgaagtatcagcat
ttaatcacaaatagttttgtagagtgtaacagactgttgaaatggtgtccagctcctgac
tgccaccatgtggtcaaagttcagtatcctgatgccaaaccagttcgctgcaaatgcggg
agacagttctgtttcaattgtggagagaactggcatgaccctgttaaatgcaagtggttg
aggaagtggataaagaagtgtgatgatgacagtgaaacatccaactggattgcagcaaat
accaaggaatgtcccaaatgtcatgtgaccattgaaaaagatggtggctgtaatcacatg
gtgtgtcgaaaccagaattgtaaagcagagttctgctgggtttgtctcggcccttgggag
ccccatggctctgcttggtacaactgcaatcgctacaatgaagatgatgcaaaagcagcc
agagatgctcaggagcgttcgcgtgcagccctgcagcgctacctcttctactgcaaccgc
tacatgaaccacatgcagagtctgcgcttcgagcacaagttgtacgcacaggtgaagcag
aagatggaggagatgcagcaacacaacatgtcgtggatcgaggtgcagttcctgaagaag
gccgtggacgtgctgtgccagtgtcggtccacgcttatgttcacctacgtcttcgccttc
tacctcaaaaagaacaaccagtccattatcttcgagaacaatcaagctgatttggagaac
gctacagaggtgctttcgggttatctagagagagatatctcccaggattctttgcaagat
atcaaacagaaagttcaggataagtatagatactgtgagagtcggcgacgagtgctgcta
cagcacgttcatgagggctatgagaaagacttgtgggagtacattgaagactga
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