Ctenopharyngodon idella (grass carp): 127515137
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Entry
127515137 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127515137
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127515137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
NOD2_WH
PRY
zf-C3HC4_4
SPRY
LRR_6
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
LRR_4
MS_N
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
127515137
NCBI-ProteinID:
XP_051754422
LinkDB
All DBs
Position
7:complement(46405838..46416706)
Genome browser
AA seq
1051 aa
AA seq
DB search
MSFYEKKEEGLSVQAKRAGTPEPSCVSLKSDVSMGMPPEFSGEAVTSDPKGLLQVSSKCG
VCEQVLRDPVSITCRHSFCKQCISCYWTKSSPSDFDCPQCRKRSRTRPILQTDKVSGGSS
SAGSALCYTQTVLLEESKNLQQDSLVDDVLQRVKERHKTSMRNKYENLFEGIKLQENQTL
LNRIYTQLYIIEGESEGVNKEHEVLQMEKTPRTQHSQIHCNDLFKSLTELGCEGKRREGS
DKIKTVLTKGIAGIGKTVSVQKFILDWAEGRVNQDIDFMFVLPFRELNLIKDDQYSIHKL
LLDFLPELHDLDSKIYDECKVVFIFDGLDESRITLMFSDKQKVCDVNEFSSIGVLMSNLI
RGELLPSALIWVTSRPAAANQIPSECINRVTEIQGFNDPQKEEYFRKRISDQHQASRIIS
HIRRSRSLHIMCHIPVFCWVSSTVLQNILKQDDSAEIPQTLTEMYIHFLLIQINIRNQKY
VERDPGKLLQFNREVILKLAELAFKQLKMGNIMFYEEDLRECGIDVIDASVYSGICTEIF
KEESVIHQRKVYCFMHLSFQEFLAAVYVFYSYVINTVEALRFFDSLHNLLRGAVDKALES
ENGHLDLFLRFLLGISLESNQKLLKDLLTNTHSCSRSIEKTTACIKDKIKHGHNLSADRS
INLFLCLFEMKDQTLYREIQEFLKSDKYLEKKLSSALCSTIAYMFQMSEEVLEELNPKKF
NTSEEGRRKLLPAVKNCRKAILADCNLTDKSCEIVATALQSSNSVLRELDLSNNDLQDSG
VKLLSDGLKSPNCQLEKLRLSGCMVTEEGCCCLALALSSNPSHLRELDLSYNYPGHSGVK
MLSDRLNLPNSTLEILNLDHGESFRITPGLRKYACDLTFDLNTVNTHLILSENNKKATYL
EEEQPYPDHPERFEHYEQVLCGESLTGRCYWEVEWSGWSHIAVTHRGINRKGGSDCRFGL
NKKSWSLVCSGKNYYARHNNARTDIPAPSSCSNIIGVYLDQPAGSLSFYSVSSETGKMIH
IYTFHCTFTEPLYAGFGVGVDGGSSVCLCKI
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctatgagaagaaagaggaaggactttctgttcaggccaaaagggcaggaact
ccagaacccagctgtgtgtctctgaagagtgacgtatctatgggcatgccacctgaattc
agtggtgaagcagtgacctctgaccccaagggtttgctccaggttagttccaaatgtgga
gtgtgtgagcaggttctgagagacccagtctctattacctgtagacatagtttctgcaaa
cagtgtatcagctgctactggactaaatccagtccatcagactttgactgtcctcagtgc
aggaagagatccagaacacggcccattctacaaacagataaagtctcaggaggatccagt
tctgctggttctgctctctgttacacacaaacagtcctgttagaggagtctaaaaacctg
cagcaggattctctggtggatgatgtcctgcagagagtcaaagagagacacaaaaccagc
atgaggaacaagtatgagaacttatttgagggtatcaaactacaggagaatcaaaccctc
ctgaacaggatctacacacagctctatatcatagagggagaaagtgaaggggtgaataaa
gaacatgaagtgttacagatggagaaaacacccaggacacaacattctcaaatccactgc
aatgacctctttaaatctttaactgaactaggatgtgaggggaagagaagagaggggagt
gacaaaataaagaccgttcttactaaaggcatcgctggaattggaaaaacagtctctgtg
cagaagttcattctggactgggcagagggaagagtgaatcaggatatagacttcatgttt
gtgcttccatttcgagagctgaacttaattaaagatgatcagtacagtattcacaaactt
ttgcttgactttcttcctgaacttcatgatctagactcaaagatttatgatgaatgtaaa
gttgtattcatctttgatggtctggatgaaagcagaatcacactgatgttttcagacaaa
cagaaagtttgtgatgtgaatgagttttcatccataggtgtgttgatgtcaaacctcatc
agaggagagctgcttccttctgctctcatctgggtcacttctagaccagcagcagccaat
cagatcccttcagaatgcattaaccgggtgacggaaattcagggattcaatgaccctcag
aaggaggaatatttcaggaaaaggatcagcgatcagcatcaagccagcagaatcatctca
cacatcagaagatcaagaagcctccacataatgtgccacatacctgtcttctgctgggtc
tcatccactgtgcttcaaaatatcctgaaacaagatgacagtgcagaaatccctcaaact
ctgactgaaatgtacatccactttctgctcattcagataaacatcaggaatcagaagtat
gttgagagagatccaggtaaactcctgcagttcaacagagaagtgattttgaaacttgct
gaacttgctttcaaacaactgaagatgggcaacatcatgttctatgaggaggatctgaga
gagtgcggcatagatgtcattgatgcctctgtgtattctgggatttgtaccgagatattt
aaagaggaatctgtaattcatcagaggaaagtctactgcttcatgcatctgagctttcag
gagtttctggcagctgtttatgtgttttatagttatgtaattaacactgtggaggcacta
aggttttttgattccctgcataatttgctcagaggagctgtagataaagccttagaaagt
gagaatggacacctggatcttttcctccggttcctgctgggcatttcactggagtccaat
cagaaactcttaaaggatctactgaccaacactcacagctgttcaaggagcattgagaaa
acaactgcttgtattaaagacaaaattaagcatggacataatctttcagctgatagatcc
atcaatctttttctttgtctctttgaaatgaaagatcagactctgtatagagagatccag
gagtttctgaaatcagacaaatatttagagaagaaactctcttctgcgctttgctcgaca
attgcctacatgtttcagatgtcagaggaggtgctggaggaacttaatcccaagaaattt
aatacatcagaagaaggtcgaagaaaactcttaccagctgtgaagaactgccgaaaagct
attcttgctgactgtaatctcactgataaatcttgtgagattgtggccacagctctacag
tcatcaaactctgtactgagagagctggacctgagtaacaatgacctgcaggattcaggg
gtgaagcttctctctgatggactgaagagtccaaactgtcaactagagaaactgagatta
tctgggtgtatggtgacagaggaaggctgctgttgtctggccttagctctgagttcaaat
ccctcacacctgagagagttggatctgagctacaattacccagggcactccggagtcaag
atgctctcggatcgactgaaccttccaaacagcacactggagatactcaatttagaccac
ggagagtccttcaggatcacaccaggactgaggaaatatgcctgtgatcttacattcgat
ctaaacacagtaaacactcatctcattctgtctgagaacaacaaaaaggcaacatatttg
gaagaggagcagccatatcctgatcatccagaaagatttgagcactacgagcaggttctg
tgtggagagagtttgactggacgctgttactgggaggttgaatggagtggctggagtcat
atagcagtcacacatcgaggtatcaacaggaaaggagggagcgactgcaggtttggactc
aacaaaaagtcctggagcctggtctgctctggtaaaaattactatgccaggcataataat
gcaagaactgacatacccgcaccctcatcatgttccaacatcataggagtgtacctagat
cagccagctggctctttgtctttttacagtgtttcctctgaaacaggcaaaatgatccac
atttacaccttccactgcacattcactgagcccctctatgcaggatttggggttggggtt
gacggtggctcttcagtgtgtttatgtaaaatatag
DBGET
integrated database retrieval system
