Ctenopharyngodon idella (grass carp): 127515165
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Entry
127515165 CDS
T08802
Name
(RefSeq) ataxin-1-like isoform X1
KO
K23616
ataxin 1/1L
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127515165
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
127515165
NCBI-ProteinID:
XP_051754472
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Position
7:42464582..42482819
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AA seq
782 aa
AA seq
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MKPVHERNQECLPPKKRDLPVNNNNNTSTNNSSSSISGGAGGSGIGGGGGGEDGPSSQSS
GVSGEAQSGSGEWMRAQPSVHYGVEGAEGLIGVPVDQYSMLYKVALPAGTYSPTSLHPVL
SHISPAYNVPSSVLQHTSVPYPPHGYTQIPHSSLQFVSSPYATAVPYALPPGFVPGPLMP
PQSAMSQPHLVPYPSVIQEGVVSSPPQQQVSYTKMLPSEQAATQAALGTVGMLSAGELSP
RGVPVFFHPAVRGVQPQRDLHGSSLEQEREVNGGDRDHGGRESHQDAVYSARSARMLQAA
ALEAQQDKSLKSRRPEGRMSPGQSSTPDTDLEVRNGWFTIGSMCYNVQQVVGRLASPVHG
TSRKEAAHVPLNLSQSSQRSRETQSEVRTAYALNPAESRAHQQHIVQQGHAVILANGQPV
LVPLDYHHHQQQQQQQHYQSNDVASPAIVASQATYTKAMDAAACLPERAVAELPPQHGQQ
LPTPTPGALPQAPLLAPTGPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKID
SSMVVDIRASQRPGLVALHFNVGEQQSKVTIDVPPEHPFFVFGQGWSSCSPERTAQLYGL
TCHHLQVGDVCVSVTLQQQAALQQKPPQQMQARTPTKANSTSGAPPQPMGPPAPQHTPRP
PNQLKMERIHRERDRDKEESMQAGGPRHIDVPPRPNRTSAEHTRSQSNYYLHTEGHAPPG
TGVGASSVGASQRRWSAPGFQRYSIKNEDGSLASAATSSSSRPSFIPQEVKLSIEGRSNA
GK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagtccatgagcgcaaccaggagtgcctccctcccaagaagcgggacctccct
gttaacaacaacaacaacacctccaccaacaacagcagcagtagcatcagcggcggagcg
ggaggcagtggaattgggggtggaggaggaggtgaggatggcccatcttcacaaagctct
ggagtgagcggagaagcccaaagtggtagtggcgagtggatgcgagcccagccgagcgtg
cattacggggtggagggtgctgagggtctcatcggggtacccgtggatcagtatagcatg
ctctataaagtagctttgcccgctggcacttactcacccaccagtctgcaccctgttctt
agccacatttctcctgcctacaacgtaccttcctcggtgttgcagcatacgagtgttccc
taccctcctcatggctacacccagatcccacactcctccttgcagtttgttagctctccg
tacgcgactgcggttccctacgccttgcctccgggatttgttcctggccccttaatgcca
cctcagtccgccatgtcacagccacacctggttccatacccatcagtcattcaggaagga
gtggtctcgtcccctccgcagcagcaggtctcgtacaccaaaatgctcccgtctgagcag
gcggcgacacaagcggcactcgggactgtagggatgctgtctgccggggagcttagcccg
agaggcgtgcctgtgttcttccaccccgccgtcaggggcgtccaacctcaacgtgacctg
cacggcagctccctagagcaggaaagggaggtgaatggtggggacagagaccacggaggc
agggagagccatcaggatgcagtttattctgccagaagtgcacggatgctgcaggcagct
gcgctggaggcccagcaagacaagagcttgaaaagccgcaggccggagggcagaatgtcg
ccaggacagagcagcacgccagacactgatctcgaggtgaggaacggatggtttactatt
ggatcaatgtgttataatgtccagcaggtggttggacgactggcctctcctgtccatggc
acgagtcgcaaggaagcagcacatgtccctctgaacctgtctcaaagctctcagaggagt
cgagagactcagagcgaagtcagaacagcatatgcattaaatcctgctgaatccagagct
catcagcagcatatcgttcaacaaggtcatgccgtgatcttggccaatgggcagcctgtt
ctcgtgcccctggactaccatcaccaccaacagcagcaacagcagcagcattatcaatcc
aacgatgtggcctcaccagccatcgttgcttctcaagctacatatacaaaagccatggat
gcagcagcgtgtctcccagagcgggcggtggcagagctgcctccccaacacggtcagcag
cttcccactccaactcctggtgctttaccacaggctcctctgctggcacccaccgggccg
tcgcacttcatgaagggcgccatcatccagttggctaccggagagctcaagcgtgtggaa
gatctgcagactcaggactttgtgcggagcgcagaagtgagcggtgggcttaagatcgac
tcgagcatggtggtggacatccgcgctagtcagcggcctggtctagtggcgctgcatttc
aacgtaggggagcagcagagcaaagtgactatagatgttccccctgaacacccatttttt
gttttcggacagggctggtcgtcctgtagccccgagcggactgcccaactgtacggtctc
acctgccaccatctgcaagtgggcgacgtctgcgtgtccgtgacgctgcagcagcaagcc
gcgttgcagcagaaaccgccgcagcaaatgcaggcccggactcccaccaaagccaactcc
acgtcaggagccccacctcagcccatgggcccccctgcgccccagcacacccctcggcca
ccaaaccaattaaagatggagcgcatccacagagagagggacagggacaaggaagagtcc
atgcaggccgggggtcctcgacatatcgatgtgccccccagaccgaacaggacttcagca
gagcacactcggagccagagcaactactatttgcacactgagggtcatgctccaccggga
accggagtgggagcctcttccgtaggggcgtcccagaggcgctggtctgcccctggcttc
caaagatacagcatcaagaatgaggacggaagtttagcctcagctgccacctctagctcc
tctcggccatcgtttatccctcaggaggtcaagctatccattgaggggcgctcgaacgcc
ggcaagtag
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