Ctenopharyngodon idella (grass carp): 127515268
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Entry
127515268 CDS
T08802
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04136
Autophagy - other
cide04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127515268
04136 Autophagy - other
127515268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127515268
03029 Mitochondrial biogenesis [BR:
cide03029
]
127515268
Membrane trafficking [BR:
cide04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127515268
Atg1 complex
127515268
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127515268
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
127515268
NCBI-ProteinID:
XP_051754674
LinkDB
All DBs
Position
7:complement(12234244..12243446)
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AA seq
536 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKISTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQSVRVGVVGTPI
GTITLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDEGG
TYAGIEDSQEVCTTSFSTSPPSQCVCTVSKAHFKTPKPALMATLKVPLVGLGISQQLYSS
RLSYQTPALGTVDLCHPTACTAAAHPHQMVVPGKEGGVPQVPAQPNHGTAAEHGRIPSCP
TGQSPQPAPPTSCSSEVKTVSPSDALETTFTRKVGAFVNKATTQVTTNSLDLPFAAFAPR
VYDLEENDPMVHPPPSPAPSSPLQGSLHSNSSSHSGGQPQEDFVMVDFKPAFSKDDLLPM
DLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDAFVDTLQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatctgagcccacaggacaagaaagacttggataaattcatcaaattcttt
gccttgaagacggtgcaggttatagttcaagcccgacttggagagaagatcagcacttgc
tcatcttcatcaccgacaggttcagactggtttaatctggcaataaaagacatccctgag
gtaactcatgaggcaaaaaaagctcttgctggacagctgcctggcatcggccgatccatg
tgtgtggagatctccctcaaaacctcagagggagactccatggagctggagacatggtgt
ttggaaatgaatgaaaagtgtgataaggacataaaagtgtcctatacagtttataatcgg
ctgtctctgctgctcaagtctttactagccatcacaagggtgacacctgcttacaagctt
tcacgtaaacaaggccatgattatgtcatactctacaggatctattttggagatgtccag
ctgacaggtctcggggaagggttccagtcagtgcgagtgggtgttgtaggcactcctata
ggcaccatcactttgtcctgtgcatatcgcactaatttggccctcatgtcttcaaggcag
tttgagaggacaggccccatcatgggtatcatcattgatcattttgtggagcgtcccttc
actaatatggcacacatgcatccttgcagttacagagcacctggagaagatgagggaggg
acttatgcaggaatagaagactctcaggaggtgtgcaccacgtccttttccacctcacca
ccatcacagtgtgtgtgtactgtaagtaaggcacattttaagacacctaagccggctctg
atggccacactgaaggttcccctcgtggggcttggcatctcacagcaactgtacagctct
cgtctgtcatatcagactcctgccctgggaactgtggatttgtgccatcctacggcttgt
actgctgctgcacatcctcaccagatggtcgtgccgggtaaagaaggtggagtcccgcag
gtgccggctcaacctaatcatggcactgcagctgagcatggtcgtatcccatcatgcccc
actggacagtcccctcagccagcaccacccacatcctgtagcagcgaggtgaagactgtg
tccccctctgatgctttagagacaacctttaccaggaaagttggagctttcgtcaacaaa
gccaccactcaggtgacgacaaacagtctggatcttccttttgctgcgttcgctccaaga
gtctatgacctggaggagaatgacccaatggtgcaccctcctccatctccggccccttca
tctcctttgcaaggcagcctgcactcaaacagctcgagccacagcggaggacagccacag
gaggactttgtcatggttgactttaaaccagcattctctaaggatgaccttctgccaatg
gatctgggcactttctatagagagtttcaaaaccctcctcaactcgcaagcctgtccatc
gatgtcagcgctcagtctatggctgaggacttggactctcttccagagaaactggccatt
tatgagaagaacattgatgagtttgatgcgtttgtagacaccctacaatag
DBGET
integrated database retrieval system
