Ctenopharyngodon idella (grass carp): 127515355
Help
Entry
127515355 CDS
T08802
Name
(RefSeq) protein transport protein Sec24D isoform X1
KO
K14007
protein transport protein SEC24
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127515355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127515355
Membrane trafficking [BR:
cide04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127515355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
127515355
NCBI-ProteinID:
XP_051754849
LinkDB
All DBs
Position
7:complement(42115529..42143726)
Genome browser
AA seq
1038 aa
AA seq
DB search
MSQQGYVATPPYSQAQAGMGGYSTGFGNPPPQSHYGAYGSPPQGYSAPPTGVLKPPASSP
SGMPPPPVSSQYGANIQQNGAHPHSFAPPAASAPSMSPYGQPPQSVYQSMAQAPPPTQQL
TNQMSSMNIAGYGQRPMQSPLSSAAPQQFQTSPPSAMGHPPPAMGHPPLSPPGQQPPSLG
SPPPMATMGSMPAPPMGMSGPPGPGVHQPPLGPQGYQQQPGSPIAGPYGAQMAGPQMAGP
QTGAYPGGFPGGPSQMAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQVYVTNVRGQVPPLV
TTDFTVQDQGNASPRFMRCTTYSFPCTADLAKQCKVPLAAIIKPFATVPKNETPLYIVNH
GETGPIRCNRCKAYMCPYMQFIDGGRRYQCGFCSCINEVPVQYFQHLDHMGRRMDLYERP
ELSLGSYEFIATLDYCKNNKPPNPPAYIFMIDVSYNNIKSGLVKLICEELKTLLDRLPKE
EGAESSAIKVGFVTYNKILHFYNVKSALAQPQMMVVSDVAEMFVPLLDGFLVNFQESQAV
INNLLDQIPDMFADTNESETVFAPVMQAGVEALKAAECSGKLFIFHSSIPTAEAPGKLKN
RDDKKLVGTEKEKTLFQPQRGVYEQLTKDCVAQGCCVDLFLFPNQYVDMATMGDVPSHTG
GSVYKYSNFQVEVNGQHFLSDLRRDVEKSIGFDAVMRVRTGTGFRATDFFGAVHMSNTTD
VEMAAVDCDKAVTVEFKHDDTLSEESGAVMQCALLYTTIGGQRRLRIHNLSLNCSSQLSE
LYKSCETDALINFFAKSAYRAMLNQPLKTVRDILVNQTAHMLACYRKNCASPSAASQLIL
PDAMKVFPVYMNSLLKTPSLVGSTELSTDDRAFHRLMVMAMGVEETQVLLYPRLIPLHTM
DVSNDSIPAPVRCSEERLSESGMFLLENGLSMFLWMGQGCPPDLIQNLFNVPSLGHLTAE
GQTSLPVLDNAHSRKLHSIISSISQQRATSMKLLIVKQKDRAEMLFRQHLVEDKGLHGGA
SYMDFLCYVHREIRQLLT
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcaaggttatgttgccacccctccatactcccaggctcaggctggaatgggg
ggatactctactggatttgggaaccccccacctcagtcgcattatggggcctatggatct
ccaccacagggttattctgccccaccgacaggtgtgctcaagccacctgcctcttctcct
tctgggatgcctccaccaccagtatccagccagtatggtgctaacattcagcagaacggg
gcccatccccacagtttcgctcctcctgctgcttcagctccatccatgtctccttatggg
cagcctcctcagagtgtttatcaaagtatggcacaagccccacctccaactcaacagctg
accaatcaaatgagtagcatgaacattgcaggatatggtcaaaggcccatgcagtctcct
ttaagctcagcagcaccacaacaatttcagacgtcaccaccatctgcaatgggacatcct
ccacctgcaatgggacatcctccactttctccacctggacaacagccaccttcattagga
tctcctccaccaatggccactatgggttctatgccagctccacctatgggaatgtctggc
ccacctggaccaggtgtccaccaaccaccacttggaccccaaggctatcaacagcaacca
gggagcccgattgcaggcccgtatggtgcacaaatggcaggaccacagatggcagggcca
caaacaggcgcttacccaggaggcttccctggaggtccatcccaaatggccggccctcct
cagaagaagctggacccggactctattccaagcacgacgcaagtgattgaggatgaccag
gctaagagaggaggccaggtgtatgtcacaaacgtcaggggtcaggtgcctccactggtc
accacagatttcacagtacaggatcaagggaatgccagcccaaggttcatgcggtgcaca
acatattccttcccctgcactgctgaccttgcaaagcagtgcaaagtgcctctggcagcc
attatcaaacccttcgctaccgtgcccaaaaatgagactcctctgtacattgtaaatcat
ggtgagaccggaccgatccgctgcaaccgctgtaaggcctacatgtgtccttacatgcag
tttatcgatggaggacgacgctaccagtgtggcttctgcagctgtattaatgaagttcca
gtgcagtatttccagcatctggaccatatggggagaagaatggatctgtatgagagacca
gaactgtctttgggctcatacgagttcattgccacgttggattactgcaagaataataag
cctcctaatcctcctgcctacatcttcatgatcgatgtctcctacaacaacataaaaagt
ggacttgtcaaactaatatgtgaggaactgaagacattgcttgaccgacttccaaaagag
gagggagctgaaagttcagccatcaaagtgggctttgtgacctacaataagatcctgcac
ttctacaatgtgaagagtgctctggcccagccgcagatgatggtggtctctgatgtggct
gagatgtttgtaccacttctcgatggattcctcgtcaacttccaggagtctcaggctgtc
atcaacaaccttttagatcagatccctgacatgtttgctgacaccaacgagagtgagact
gtttttgcaccagtcatgcaagctggtgtggaggccctaaaggcagctgaatgcagtggc
aaactcttcatcttccactcctccatcccaacagcagaggctccaggaaaactgaaaaac
agagatgacaaaaaactagtcggtacagaaaaggagaagactctgttccagcctcagcga
ggtgtatatgagcagctcaccaaagactgtgtggcacagggctgttgtgtcgacctcttc
ctgtttcccaaccagtatgtggatatggctaccatgggcgacgtgccctcacatactgga
ggctcggtctacaagtacagcaacttccaggtggaggttaatggtcagcattttctcagt
gacctcaggagagatgtggagaagtccatcggattcgatgccgtcatgcgtgtccgtact
ggcacaggcttcagggcaacagatttctttggtgccgtacacatgagcaacactacagat
gtggaaatggcagcagtggactgcgacaaggccgtgacggtggagtttaaacatgacgac
acactcagcgaggagtctggagctgtgatgcagtgtgctctgctctacaccaccatcggt
ggacagaggaggctgcgaattcacaacctcagtctgaactgcagctcacagctctctgag
ctctacaaaagctgtgagacagatgccctcatcaacttcttcgccaagtcagcatatcgg
gccatgctcaaccagccactgaagacagtgagggatatcctggtaaaccagacggctcac
atgctggcctgctacaggaagaactgcgccagtccatcagcagccagccagctaatcctg
cctgatgcgatgaaggtgtttccagtctacatgaacagtctgttgaagactccatctcta
gtaggcagtactgagctctccacggatgacagagccttccacagactcatggttatggcg
atgggagtggaggaaacccaggtcctactctaccctcggctcatcccgctgcacactatg
gatgtgtccaacgactcgatcccggctccagtgcgctgttctgaggagcggctcagtgag
tcaggcatgttcctgttggaaaacgggctctctatgttcctctggatgggacagggctgc
ccacctgacctcatccagaacctgttcaatgtgccctctcttggccacctgaccgcagaa
gggcagacgtcattacctgtgctggataatgctcattccaggaagctccattcaatcatc
tccagcatttcacagcagagggccacatccatgaagctgctgatagtgaagcagaaggac
cgagcagagatgttgttccgtcagcacctggtggaggataagggtcttcacggaggggcg
tcttatatggacttcctgtgctacgtccaccgtgagattaggcagctgcttacttaa
DBGET
integrated database retrieval system
