Ctenopharyngodon idella (grass carp): 127515376 Help Entry 127515376         CDS       T08802                                  Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04382   Cornified envelope formation cide04510   Focal adhesion cide04512   ECM-receptor interaction cide04518   Integrin signaling cide04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cide00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127515376    04518 Integrin signaling     127515376  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127515376   09142 Cell motility    04820 Cytoskeleton in muscle cells     127515376  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     127515376  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cide04147]     127515376    00536 Glycosaminoglycan binding proteins [BR:cide00536]     127515376 Exosome [BR:cide04147]  Exosomal proteins   Exosomal proteins of other cancer cells    127515376 Glycosaminoglycan binding proteins [BR:cide00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127515376 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  127515376 NCBI-ProteinID:  XP_051754895 LinkDB All DBs Position 7:complement(20076096..20130997) Genome browser AA seq 1679 aa AA seqDB search MNLKSLGAVLVVFLTISTEVQKTDGAACHGCGTGSKCDCSGVKGEKGDRGLPGLTGQPGV PGFPGPEGPIGPRGEKGDDGPLGPMGPKGIRGPPGLPGFPGTPGIPGLPGQDGAPGPRGI PGCNGTKGERGFPGSPGLPGLEGRIGPPGSIGQKGEPGDVIEINSISENGDPGIGGLPGS RGNPGPPGPQGPVGPSGPRGFEGRPGPPGPPGPKGNMGLNFQGPKGEKGDQGLQGPPGPP GQVGEQQGLPDTVIQQGEKGDPGSPGDPGFPGPPGPPGPQGGQKGDKGEPGEPGKRGKPG KDGEQGFSGYPGEKGEPGPPGQPGRDGVRGEKGDRGPPGPPSFRNGQFTGIGGIGPKGDS GEPGPPGPKGDRGLPGIQGPPGPQGPAGIGGLGPPGSPGLPGERGEKGDEGEPGFSLPGP PGRPGPQGLQGLQGPPGPPGIFNGDEECNRGPPGPPGLQGERGFPGETGQKGQKGETCVN CFSNGNPIPGPPGNPGPPGNPGAPGVPGSKGDRGFPGGPGLMGPPGIQGPQGPPGYPGEK GDPGDAISVLGVKGDKGDTGFPGPQGLPGREGRPGRDGVPGPPGLKGPPGSALVKGAQGP PGEPGFPGSPGDRGLPGPPGSGPQGPPGEKGIQGVSGRPGIPGAPGQKGEPGLAVSEKGD RGPPGRDGDPGLPGSPGNTGPPGQPGFPGLPGAKGDRGLPGIGLPGPPGTKGFPGIAGSP GGPGIPGRPGLDGQPGQPGLSGPKGEPGFGLPGPPGPTGFPGGKGTPGPKGDPGFPGSPG APGRPGLDGSPGPKGDAGFPGGPGPRGPPGPPAYGLQGPPGPPGPPGSMGPTGVQGANGE KGDRGPPGLSIPGIQGDRGSPGFPGPPGAIGPSGGPGLPGQDGLPGLPGPKGDIGGMGAP GPSGGPGNPGRPGFPGPKGDDGVPGRPGSTGYPGLKGDKGDPGIPGPPGIIQAQTLKGQK GDPGVPGLSGPPGAKGVPGIPGDPGLPGQDGRPGLPGPPGPKGDPGLPGTPGSSGPPGLK GSMGEMGLPGIPGVKGNPGQPGRSGLPGATGAPGFPGPKGDPGSPGFGLPGNPGPKGEPG TPGFPGTPGLKGQPGLPGSPGLTGSPGPKGDPGLPGFQGAPGIPGPKGLDGAPGPPGLSG IPGRPGDPGRSGPPGIIGDKGLPGRDGIPGPAGQKGEPGAPGLGTPGPPGFPGSPGPKGD PGFPGSPGSPGFPGSKGESGFPGLPGQIGPVGPPGPPGLPVQGPKGIQGPPGPPGRAGPP GPEGPRGPPGSGGVKGEKGLPGLPGTPGAPGLKGDYGPPGFPGAPGNPGPSGLKGDIGPP GVSGFPGSKGQPGPPGADGPPGQRGDPGSQGPRGDPGIPPEPIFLKGERGPPGPSGIPGS RGPVGPPGLQGLPGSPGNPGDPGQMGPPGFSGTPGRKGDIGPAGQPGPRGYPGPPGPDGI PGPPGTSGQTAAAHGFLITRHSQTTDVPSCPDGTNVIYDGYSLLYVQGNERAHGQDLGTA GSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPQPMSISMAPITGESIKPYISRCSV CEAPAMVIAIHSQTIQVPSCPLNWDILWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRS SPFIECHGRGTCNYYSNSYSFWLATVDVNEMFRKPESETLKAGNLETRVSRCIVCMKRT NT seq 5040 nt NT seq  +upstreamnt  +downstreamnt atgaacttaaagagtctcggcgcggtgttagtggtgttcctcactataagcacagaggta cagaaaacagatggagcggcatgtcatggttgtgggactggatcgaagtgtgactgcagt ggggtgaaaggagagaagggtgatcgagggcttccaggtttaacaggccagccaggtgtt ccaggtttccctggaccagaggggccgattggacctcgaggagagaagggtgatgatgga cctctagggccgatggggcccaaaggaataagaggacctcctggattgccaggcttccca ggaacaccaggaatcccaggcctcccaggacaggatggcgcaccaggacccagaggaatt ccaggctgtaacggaactaaaggtgaaagaggattcccaggaagtccaggccttccaggt ttagagggtcgaataggtccaccaggttctataggacaaaagggggagcctggggatgtc atagaaataaattcaatttcagaaaatggggatcctggcattggtggtttaccaggctct aggggcaatcctggacccccaggtcctcaaggtcctgttggtccttctggtcccagagga tttgagggtcgtccaggccctcctggtccacctgggccgaagggaaacatgggattgaac tttcaaggacccaaaggagagaagggtgaccagggattacaaggacctccaggaccacca ggacaggttggcgaacaacaaggcttgcctgatacagtcattcaacaaggagaaaagggt gatcctggctcacctggagatcctggttttccaggcccccctggcccccctggtccgcaa gggggccagaaaggtgacaaaggagaacctggcgagcctggaaagaggggaaaacctggc aaagatggtgaacaaggcttctctggatatccgggtgaaaaaggagaaccaggtcctcct ggtcaacctggacgagatggtgtgagaggtgagaaaggtgatagagggcctcctggacct ccatcattcaggaatgggcagttcacaggcataggcggaataggaccaaaaggagacagt ggtgagccaggaccacctggacctaaaggagacagaggacttccaggtattcagggccca cctggtccacaaggtcctgcaggaattggaggtctaggtcctcccggctcaccagggtta cctggagagagaggagaaaagggcgatgagggagagcctggattctcacttcctggacca cctgggagaccaggtccacaaggtctccaaggactccaagggcctcctggtcccccagga atattcaacggcgatgaagaatgtaatcgtggtcctcctggtcctccaggactgcagggg gagcgtggatttcctggagaaacaggacagaaaggtcaaaaaggagagacatgtgtgaat tgtttcagtaacggaaaccctatcccaggacccccagggaatccaggtcctcctggaaat ccaggtgcacctggggtgcctggatctaaaggagatagaggattcccaggagggccaggg ctcatgggcccacctggaatacaaggacctcagggaccccctggataccctggagagaag ggcgacccaggtgatgccatctctgttctgggtgtgaaaggagataagggagacacaggc tttcctggccctcaaggtctgccgggacgcgaaggaagacctggtcgtgatggagtgcct ggtccccctggcctcaaaggaccacctggttcggcattggtgaaaggtgcacaaggtcca ccaggtgaacctggctttccaggatctccaggagacaggggtctgcctggtcccccagga tctggtccacagggacctcctggagagaagggtattcagggtgtttcaggaagaccgggg attcctggagcaccaggtcagaaaggtgaacctggcttggctgtgtcagaaaaaggtgac cgtggacccccaggacgggatggagatcccggattgccaggaagtccaggtaatacaggc ccacctggacagcctgggttcccaggcctacctggagccaaaggagatcgtggtcttcct ggtattggattgccaggacctcctggaactaaaggttttcctggtattgctggttcccct ggtggacctggcattcctgggcgaccaggtttggatggacaacctggtcagcctggatta tctggacccaaaggagagcctggttttggcctacctgggcctccaggtcctacaggattc ccaggcggtaaaggtacacccggtcctaaaggtgatcctggtttccctggaagccctggt gcaccaggtcgtccaggtctcgatggttcccctggacctaaaggtgatgctggttttcct ggtggtcctggtcctcgtggccccccagggccccctgcctatgggcttcagggcccccct ggtcctcctggacctcctggctctatggggcctactggagtccaaggtgcgaatggagag aaaggagaccgtggaccccctggtctgagtatcccagggatccaaggtgacagaggaagc cctggatttcctggacctcctggcgcaattggtccatctgggggtccaggactacctggt caagatggcctaccaggattgcctgggcctaagggtgacattggtgggatgggtgctcca ggaccttcaggtggccctggcaaccctggcagaccaggctttccaggaccaaaaggagat gacggtgtcccaggacgaccaggaagcacaggttatccaggattaaagggagacaaaggt gacccaggcattccaggcccacctggcataatccaagctcagacacttaaaggacaaaaa ggagatcccggagttccaggcttaagcggaccaccaggagcaaagggtgttcccggtatc cctggagatcctggtctccctgggcaagatggaaggccaggactaccaggacccccaggc cccaaaggtgatcctggtctcccagggactccagggtcttcaggacccccaggactgaag ggtagcatgggagagatgggattgccaggaattcctggagtgaaaggaaaccctggccaa cctggccgatctggcctgcctggagccacaggagcaccagggttcccaggacccaaaggt gatcctggatcaccaggatttggattaccaggaaatcctgggccaaagggtgaaccaggc actccaggattccctggaacccctgggctgaaaggccagcctggccttccaggatctcca ggcttgactggtagccctggaccaaagggtgatccgggactcccaggattccaaggtgca cctggtattcctggccctaaaggtttggatggtgctccaggccctcctggtcttagtgga atacctggaaggccaggagatcctggacgatctggaccacccggcatcattggcgataaa ggtcttcctggtcgtgatggtattccaggacctgcgggacaaaagggtgaaccaggtgct ccaggccttggtaccccaggcccgcccggttttcccggttcaccagggcctaaaggagac cctggttttcctggttctcccggaagtcctggatttcctggttcgaagggtgagtcagga ttccctgggttgcctggtcagattggccctgtagggccacctgggcctccaggcctacct gtgcagggacctaaaggtatccaaggcccacctggtccccccggaagagctggtcctcct ggccctgagggtccacgtggacctccaggtagtggaggagtgaagggtgagaagggcttg cctggactccctgggacacctggtgcacctggactgaaaggagattacggtccccctggt tttccgggtgctccaggaaatccagggcctagcggcctgaaaggagatattggacctcca ggtgtttctggattcccaggatctaaaggacagcctggccctcctggagctgacggcccc ccaggacaacgtggtgatcctggaagccaaggaccccgtggtgatccaggcattcctcca gagcctatttttttgaagggcgagcgtggaccacctggaccatctggaatcccaggcagc agaggcccagtaggacccccgggattacagggtcttccaggttcacctggcaatcctgga gacccaggtcaaatgggacctccaggattttccggcacacctggaaggaagggagatata ggaccagctggacaaccaggtccgcgtggttaccccggccctcctggtccagatgggatt ccgggccctcctggtacctcaggacaaacggctgcagcacacggttttctgatcactcgc cacagtcagaccacagatgtgccatcgtgtccagacggcacaaatgttatctatgatggc tactctttactctatgtgcaaggcaacgagagagcgcacggacaggacctgggtacggct ggtagttgtctacgtcgtttcagcacaatgcctttcatgttctgtaacatcaacaatgtt tgcaacttcgcatcccgaaatgactactcctattggctgtccacaccacagcccatgtca ataagcatggcgcccatcactggagagagcatcaaaccttacatcagtcggtgttctgtg tgcgaagctccggccatggtgattgctatacacagccagaccattcaggtgccatcctgc ccgctgaactgggatatcctctggattggttactccttcatgatgcacaccagtgcaggt gctgagggctcaggtcaggctctcgcctctcccggctcctgtctggaggagttccgctcc tctccgttcatcgagtgccacggtcgaggcacctgcaattattacagcaactcgtacagc ttctggctggccactgtggacgtgaatgaaatgttcagaaagccagagtcagagacactg aaagctggaaacttggagacccgtgtgagccgctgtattgtgtgtatgaagaggacgtaa

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