Ctenopharyngodon idella (grass carp): 127515406 Help Entry 127515406         CDS       T08802                                  Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism cide  Ctenopharyngodon idella (grass carp) Brite KEGG Orthology (KO) [BR:cide00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:cide00535]     127515406    00536 Glycosaminoglycan binding proteins [BR:cide00536]     127515406    04091 Lectins [BR:cide04091]     127515406 Proteoglycans [BR:cide00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    127515406 Glycosaminoglycan binding proteins [BR:cide00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    127515406 Lectins [BR:cide04091]  C-Type lectins   Lecticans    127515406 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C EGF Sushi EGF_TEN V-set hEGF EGF_3 Motif Other DBs NCBI-GeneID:  127515406 NCBI-ProteinID:  XP_051754954 LinkDB All DBs Position 7:18414887..18430216 Genome browser AA seq 1525 aa AA seqDB search MLSLLLLSMCSWVFSATGSFDYVNTEPEIPLRVSIPNEVPLRPLMGDTLVLPCYFLDNTV NDPGAPTIAPLSYRIKWSLVTKEKITNILVASEGIVSIDRSYLDRITMLGYPMTPTDASI KMTELHSNDSGVYRCEVMHGIEDNHATVDVQVQGIVFHYRAITTRYTLTFEKAKAACIQN SAVIATPEQLQAAYDEGFHQCDAGWLADQTVRYPIHDPREACYGDKYQFPGVRTYGVRDV NETYDVYCFAEKMTGKVFHTTSPNKFTFEEAEDECAKLGANLATTGQLYLAWKGGMDVCD AGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPLPDSRYDAFCYSEMGEEGSG LFPFGIETTTEAGSDVLWVNTITESPQVFLKPTSTKSELQGEVVTYKPSVTTSVEFPYTA LNISQLPLSPPPSSVEVVTDIVEGVTNRTDLGSDLSHLNGSEAIMSATGVVFHYRASSSR YAFDFVEAQLACKSIGAVIASSQQLQAAYEAGYHQCDAGWLLDQTVRYPIVSPREKCDGN LEHVPGVRSYGLRSADERYDVYCYMDKPRGEVFHASSFEGFTYDEAVAYCQDQNASLAST GDLYAAWKQGFDKCRPGWLLDRSVRYSINNPRQQCGGGMAGVHTVYMFPNQTGSPDLHSK YDAYCFKVDLALSLNESEPNKTVEEEKIVSMTSFPAFHRPESTLVTTSIPVEPSGSGASG ASSTDDLSSGSGDQPSGSSVSSGDSSGTSGTDDMLSSGSGYKPSGSFVSSGDSSGASGTD IMLSSGSGDQQSGSFGCIGESSGASSTDDLLGSGSGDQPSGSFVSSGDSSGASGSGVLPS GSGDSSGFGSGLDNLVIFSESDTVLSGVGSASGRPEEAGKGGTESFTFPIGQSLDLFGVD TSGSGSGSGSGYSSEESGSTSDFSSSSGESDESGDLSGISSGSGSSEESSVFSGFPSGIF PSGGSSGISLIDGSGIIMVDNPWVKVSTAPPLEQELVGSHVDFSGSGHISGSGMSGDISG MNSDISGMSGDISGVSGVHSGSGSGLAFSGLTFLESDFTDLTEQSPAQEASGLLLFGSGE GSEFTSGGYSIESGERSGESASGDITFFTDNGIMKIPNKPLQVMKQGRGEVEYSGNVRLS SGSGDDQSVYASGQEHELISVTDTPMENSSDAPSAVLSAQGPSGLYSDAAGPPVPYSEPE EIISQLETVTSAALSSTTEPASLQSPSVTDGPVVNASLNPCDPNPCGAGVCSVKDGVGLC HCPPGLHGEECQYEVDVCHSNPCANGATCVEVEDTFKCLCLPSYEGDHCEIDVHSCEEGW NKFQGNCYLHFSERETWLDAERRCRDLNAHLVSVITPEEQAFINSYAQDYQWIGLNDKTV ENDFRWSDGNPLQFENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKTGP VTCEQPPKVENARMFGNKKDRYQVNSIVRYQCSENFTQRHLPVIRCMADGQWEKPQVQCI SKVKSGLQKESSVHKSSTKTLEKHL NT seq 4578 nt NT seq  +upstreamnt  +downstreamnt atgctgtccttgcttttgctgagcatgtgttcctgggtcttctcagccacagggtctttc gattacgttaacactgagcctgaaatcccactgagagtcagcatacccaatgaggttccc ctccggcctctgatgggtgacacgttagttctgccctgttacttcctggacaacacagtc aatgaccctggtgcccccaccattgctcctttgtcttaccggatcaaatggagtctggtc accaaagaaaagattacaaacattttagtggcatctgaagggatagtaagcattgacaga agttatctggatagaatcaccatgctgggatacccaatgacacccacagacgcatccatt aagatgactgagctccattccaatgactcaggagtgtatcgctgtgaggtcatgcacggg atagaggataaccatgctactgtggatgtccaagttcaaggtattgttttccactatcgt gcaatcaccacacgatacacccttacttttgagaaggccaaggcagcctgtattcaaaac agtgcagtgattgccactccagagcaactccaagcagcttatgatgagggattccatcag tgtgatgctggctggcttgcagatcagaccgtcaggtaccctattcatgatcctcgtgag gcttgctatggagacaagtaccaatttccaggagtgaggacatatggagtgagagacgtg aatgagacgtatgatgtgtactgttttgctgagaaaatgacaggaaaagtgttccacact acttcccctaacaaattcacttttgaggaggcagaagatgagtgtgcaaagctgggtgcc aacttggccaccacaggacagctgtacctggcgtggaagggtggtatggatgtttgcgat gcaggctggttggcagaccggagtgtccgctaccccatcaacattgcccgaccacagtgt gggggtggcctattgggagtgcgtaccgtctatctgtttcccaatcagaccggctacccc ctcccagactcccgctatgatgctttttgctactctgaaatgggtgaggagggttcaggc ttatttccatttggaattgagacgactacagaggccggcagtgatgtcctgtgggttaac acaatcacagaaagcccccaggtctttttaaagcccacctccacaaaaagtgaactacag ggagaagttgtaacatataagccctcagtaaccaccagtgttgagtttccctatactgca ctaaatatttcccagctgcccctttcaccacctcccagctctgttgaggtagttacggac attgtggaaggggtcactaacaggactgatctcggctctgatttatcccatctgaatgga agcgaagctataatgtctgccacaggggtggtcttccattaccgtgcaagctccagtcgt tatgcctttgactttgtggaggctcagcttgcttgtaagagcatcggtgcagtcattgcc agctcccagcagctgcaggcagcctatgaggctggttatcatcaatgtgatgctggctgg ctcttagatcagactgtcaggtatcccattgtgtctccacgtgagaaatgcgatggcaat ttggagcatgtacctggtgtgaggtcttatggactgcgttctgccgatgaacgctatgat gtgtactgctatatggataaaccaaggggggaagttttccatgcaagttcattcgaggga ttcacttacgatgaggcagtggcttactgccaggaccagaatgcctccctggcctccaca ggagacctgtatgctgcttggaagcagggctttgataagtgccgtcctggctggcttctt gaccgcagcgtacgttactccatcaataacccccggcagcagtgtggtggagggatggct ggagttcacacagtttacatgtttcccaaccagacgggctctcctgacctgcactccaaa tatgatgcatattgcttcaaggtggatctagctctatctctgaatgaaagtgaaccgaat aagacagtagaagaggaaaagatagtgagcatgacgtcctttcctgctttccacagacct gaaagtaccctcgtcactacttccatccctgtggaaccctctggatctggtgcatctggg gccagcagcaccgacgatctgagcagtggaagcggggatcagccaagtgggtcatctgtt tcaagtggagactcctcagggaccagtggcactgacgatatgttgagtagtgggagcggt tacaagccaagtgggtcatttgtttcgagtggagactcttctggggccagtggcactgac attatgttgagcagtgggagcggggatcagcagagtggatcatttggttgcattggagag tcttctggggcaagtagcactgacgatctgttgggcagtgggagcggggatcagccaagt gggtcatttgtgtcaagtggagactcttctggagccagtgggagcggagttctgccaagc gggtctggagactcttcaggatttggcagtggcttagataacctagtaatcttttcagaa agtgacacagttttatcaggagttggatcagcttcagggagaccagaggaggctgggaag ggaggcaccgagagcttcaccttccctatcggccagagcttggacctctttggtgtggac acctctggatcgggatcaggcagtgggtcagggtatagctctgaagaaagtggatctacc tcagacttttccagcagctcaggagaaagcgacgagagtggagatctttctggcatctcc tcaggatctggttccagtgaggagtcctcagtattcagtggcttcccatcaggaattttt ccctctggaggatccagtgggatttcattaattgacggcagtggcatcatcatggtggat aacccatgggtgaaggtgtccactgctccacctttagaacaagagttggttggaagccat gtggatttcagcggatcaggacacatctcagggtctggaatgagcggtgatatctctggg atgaatagtgatatctctgggatgagtggtgatatctctggagttagcggtgtccacagc ggctctgggagtggtttagcattttctggtcttacatttttggagtctgacttcactgat ctcacagaacaatctcctgcacaagaagcttctgggcttttgttatttgggtctggtgag ggaagtgaatttacatctggaggctattccattgaatcaggagaaagatcaggagaatca gctagcggtgatatcaccttcttcaccgataatggcataatgaaaatacccaacaagccc ttacaagtaatgaagcaaggaaggggagaggtggagtatagtggcaacgtcaggctgtcc tcaggaagtggagatgaccaaagtgtctatgctagtggacaagaacatgaattgatctca gtcactgacacaccaatggagaactccagtgatgctccctcagctgtactatctgctcaa gggccatcaggcctgtacagtgatgctgcaggacctccagtgccttattcagaaccagag gaaatcatcagtcaacttgagactgttacttctgcagctttgtcttcaaccacagagcct gcctctttacagagtccttctgtcaccgacggacctgttgtgaatgcctctcttaaccca tgtgatccgaacccttgtggagccggggtgtgttcagtgaaggatggtgtgggcctctgt cactgcccacctggactacatggagaagagtgccagtatgaggttgatgtttgccattca aacccttgcgccaatggagccacctgtgtggaggtggaggacactttcaaatgcttatgt ctgcccagctacgaaggagaccactgtgagattgatgtgcacagctgtgaggagggctgg aataagtttcagggcaactgttacttgcatttctcggagagagagacctggctggatgct gagcgacgctgtcgagacttaaacgctcacctggtgagcgttatcaccccagaggagcaa gccttcatcaactcatacgcacaagactatcagtggattggactgaacgataaaacagtg gaaaatgacttccgttggtcagatgggaaccccctgcaatttgagaactggaggcctaac cagcctgacaattatttcaactctggtgaagactgtgttgtaatgatctggcatgaaaat ggccaatggaatgacgtgccctgcaactaccacctgcctttcacatgcaaaacaggtcca gtgacatgtgaacaacctcctaaagtggagaatgccaggatgtttggaaacaagaaagat cgttatcaggtgaattctatcgtcagataccagtgcagtgaaaacttcacacagcgccac ctacctgtgatccgctgcatggcagatggacagtgggagaagccacaagtgcaatgcata tcaaaggtcaaatccggactgcaaaaggaatcatctgttcataaatctagtacaaaaaca ttggagaaacatctctaa

DBGET integrated database retrieval system