Ctenopharyngodon idella (grass carp): 127515504
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Entry
127515504 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: M-protein, striated muscle
KO
K24495
myomesin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127515504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127515504
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127515504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_J_second
C2-set_3
C2-set_2
Ig_CD22
STT3_PglB_C
Motif
Other DBs
NCBI-GeneID:
127515504
NCBI-ProteinID:
XP_051755173
LinkDB
All DBs
Position
7:40596774..40648086
Genome browser
AA seq
1469 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRSRETESAISQYQQSSSSYSQSSKSTKGIRAATYTSLEEGG
ISPLPKRAKPTYLAMDKENQIIGYVVPIFRGSREFESGLSDTEEARAKESAGYLARRDLF
TRGVESERIEHKSRRTIMRESAERISLSKRIHENEEYHKRMNEDSLMHTPEFVTKPRSHT
VWEKQCVRLHCTISGWPEPRVVWYKNNVSIDPMSKPGKYKLESSYNVHSLEINRCDFDDT
AQYRVSAMNSKGENSAFASVVVKRFKGEFDESLPSPRLQSRKFGFEAPCLEYGITFETHI
VEKFGVSFGREGETLSLGCSVIIYPSLQRFQPEIEWYRDDKLLVPSKWVQMHWSGDRATL
TLTHLNKEDEGLYTLRVITKSSFETHSAYVFVRDSDAEVAGAPGAPLDVHCQDANKDYVI
VTWKQPAVDGGSSILGYFVDRCEVGTTHWAQCNDTPVKFARFPVTGLVEGRSYVFRVRAV
NKAGMSHPSRVSEPVAAMDPADRTRKGASAPWTGQIIVTEEEPVEGVVPGRPRDLTVIEA
TKNYVVLSWKPPGDKGHEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYC
FRVRCCNSAGVGEPSDPTEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEGSREAKELV
GYYIEDSIVGSKTWEPCNNKPVKGTRFVCHGLTTGESYIFRVRAVNAAGISEFSQESEAI
KVKAAIASPAPPYGINVLECVRDSMVLAWKQPTFIGGADITGYFVDYREVIGGVPGKWHE
ANIKSVSERAYRVSELKENMLYQFQVRAANMAGVGIPSLPSETFKCEEWTIAVPGPPHDL
QVREVRKDSLVLLWKPPVYQGRDAVNGYYIDIKEAEADFEMWRGVNEKATNKTFMKIKDL
KEGESYVFRVRAQNKAGVGKASEATEPVEAVTKPGTAEIVVNVDDDGVISLNFECSNLTA
DSKFVWSKNYEEMTEPKRMTLETKGSKSKAIFNTPSEDDLGIYSCFVTHTDGASGSYTLS
EEALKELLKVSHEHKFPIIPLKTELAVELLEKGRVRFWLQAEKISANGKVEYVFNDNMIS
QGEKYKMNFDKNTGIIEMFMESLGKEDEGTFTFQLQDGKATNQSSLVLIGDVFKQLQKES
EFQRKEWHRKQGPHFVEYLGYEVTPECCVRLKCKVGNMKKDSVALWYKDGREVKVNEKLD
FSEGVLTLEITQISKKDAGIYEVVLKDDRGKDTSTLNLTDQGFKDLMNQVFSVIANSSTP
LKIQSTEEGIRLYSFVSYYNDELHVTWHHKDAAIAFTERIKSGVVGEQLWLQISEPTEKD
KGKYAIEFFDGKGGLRRTVELAGQAFDDAYAEFQRLKAAAIAERNRARVAGGLPDVVTIQ
EGKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFESGKFASFTITSVNTSDSGKYS
ILVKNKYGTESGDFTVSVFMPDEEHGKKK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcgataccgttctaccagaaacaccaccgccattatgatcgtggctaccgt
agccgggagacggagtctgctatcagccaataccagcagagctctagtagttattcccaa
agcagcaaaagcaccaagggcattagagctgccacatacacgtctctagaagaggggggg
attagccctctgcccaagagggccaagccaacctatcttgccatggacaaggagaaccag
atcatcggttatgtggtgcccatcttcaggggcagtcgtgagtttgaaagtggcctatca
gacactgaggaagcacgtgctaaagagagtgctggctatctggcacggcgtgacctcttc
actaggggtgtggagtcggagcgcatcgaacacaagtcccgcagaaccatcatgagggag
tccgcagagcgcatctcccttagcaagaggatccatgagaacgaagagtaccataagcgt
atgaacgaggacagcctgatgcacacgcccgagtttgtgaccaagccacgttcccacact
gtttgggagaaacagtgtgtgaggctgcactgtaccatctcaggatggcctgaaccacgc
gttgtgtggtacaagaacaatgttagcattgatcctatgtccaagccagggaagtacaaa
ttggagagcagctataatgtccactccctggagattaacaggtgtgattttgatgacacc
gcacaatatcgagtgtcagccatgaacagcaagggcgagaactctgcttttgcttctgtt
gtcgtcaaaagattcaaaggagaatttgatgagtctctgccatctcccagactccaaagc
agaaagttcggctttgaagcaccttgtctggagtatggtataacattcgagacgcacatt
gtggagaagtttggtgtgtcttttggacgtgagggtgagacgttgagtttgggctgctct
gttatcatctatccttcactgcaacgcttccagcctgagatagagtggtacagagatgat
aaactgctggtgccatcaaaatgggttcagatgcactggagcggcgacagagctacactc
actctcacacacctcaacaaggaggatgaggggctgtacacacttcgtgtcataaccaag
tctagctttgagacacattctgcgtatgtctttgtcagagattctgatgctgaggttgcg
ggtgctcctggtgctcctttagatgtacattgtcaggatgccaataaggattatgtcatc
gttacctggaaacagcctgctgtggacggcggaagttccattttgggctactttgttgat
aggtgtgaagttggcactacacactgggcacaatgtaacgacactcctgttaagtttgca
cgtttccctgtaactggtcttgtggaagggcgaagctatgtgttccgcgtgcgtgccgta
aataaggctggtatgagccatccatcacgtgtatctgaaccagtagccgctatggaccct
gcagaccgcacaagaaaaggtgcctctgctccttggactggacaaataattgttactgag
gaggagcctgtggagggagtggttcctggcagacctcgtgacctcacagtcattgaagcc
actaaaaactatgtggtgttgagctggaagcccccaggcgataagggccatgaaggggtt
atgtattacgtggagaagtgtgtgtctggcacagacagctggcagcgagtgaacactgaa
atccctgtgaaatctccacgttttgctctttttgatctggctgagggcaagtcttattgc
ttccgtgttcgttgctgcaactcagctggtgttggagaaccatcagatccgaccgaagcc
accacggttggggacaagctagatatcccatcagcccctggccgtgtggtgcctacccgc
aatacagacacatctgtggtggtttcatgggaagggtcacgtgaagctaaagagctggtg
ggctactacattgaggacagtattgtggggagcaaaacttgggagccatgcaacaacaaa
ccagttaaaggcacaaggtttgtctgtcatggcttgaccacaggcgagagttacattttc
cgagtgagagcagtcaatgctgcgggaatcagtgaattctcacaagaatctgaagccatt
aaagttaaagctgcaattgcttcacccgctccaccctatggcatcaatgtgttggaatgt
gtgcgggactcgatggtactagcctggaaacaacccactttcatcggtggtgctgacatc
actggttactttgttgattaccgtgaggtcatcggtggagtcccgggaaaatggcatgaa
gcgaacattaagtctgtcagtgagagagcttatagagtttcagagctgaaggaaaacatg
ctgtaccaattccaggtacgtgctgccaacatggctggtgtgggcatcccgtctcttccc
agtgagacattcaagtgtgaggagtggactattgctgtaccgggaccaccccatgacctc
caagtacgggaggtgcgtaaagactctttggtcttgctctggaaaccacctgtctaccag
ggtcgtgatgctgtcaatggatactacattgacatcaaggaggctgaagcggactttgaa
atgtggagaggggtcaatgagaaagctactaacaagacattcatgaagatcaaggatcta
aaggagggggagtcgtatgttttccgtgtacgcgctcagaacaaggctggtgtaggaaaa
gcatcagaagctacagaaccagtggaggcagtgactaaaccaggtactgcagagatagtt
gtgaatgttgacgacgatggcgtcatttcactgaattttgagtgctctaacctcactgct
gactccaaatttgtctggtccaagaactatgaggaaatgacagaacctaaacgcatgacc
ttagagaccaagggtagcaagtccaaagccatatttaatactccttcagaagatgacctg
ggcatctactcttgcttcgtgacacacactgatggagcttcaggcagctacacgctctct
gaagaagctctaaaagaactcctgaaggtcagccatgaacacaaattccccatcatccct
ctgaaaacagagctggccgtagagctgctggagaagggtagagttcgcttctggttgcag
gctgaaaaaatctctgccaatggaaaagttgaatacgtgttcaatgacaatatgatctcc
cagggagagaaatacaagatgaactttgataaaaatactggcattattgagatgttcatg
gagtctctgggcaaagaggatgagggaacattcactttccagcttcaagatggcaaagcc
actaaccagtccagtctagtcctaattggagatgtgttcaagcagttacagaaggaatca
gagttccagagaaaagaatggcatagaaagcaaggtccacactttgtggagtatcttggt
tatgaagtcacacctgagtgctgtgtaagactgaagtgcaaggttggtaatatgaagaaa
gactccgtggccctgtggtataaggatggacgagaggttaaggtcaatgagaaactggat
ttctctgaaggagtattaactttggagatcacccagatctcgaaaaaggatgctggtata
tatgaagtagttttgaaggatgacagaggcaaagacacctccaccctcaaccttactgac
caaggattcaaagacctgatgaatcaggttttcagtgttattgcgaactcgtccactccg
ctgaagatccagagcacagaggagggaatcaggctctacagcttcgtcagctactacaac
gacgagctgcacgtcacctggcatcacaaggatgctgcaatcgcattcaccgagcgcatt
aagagtggtgtggtgggtgagcagctgtggctgcagatttctgagcccacagagaaagat
aaaggcaaatacgccattgagttcttcgatgggaaaggaggtttgcgcagaactgtggaa
ttggctggacaagcatttgatgatgcatatgctgaatttcaaagactcaaggctgctgct
attgcagaaagaaatcgtgctcgtgtggcaggtggtttgcctgatgttgtgaccatccaa
gagggcaaggctttgaacctgacctgcaatatctcgggtgaccctgtaccagaggtcact
tggctaaagaatgaacgtgagatggtttcggacgatcactatattctgaagtttgagtca
ggcaagtttgccagtttcaccatcaccagcgtcaatacgtctgactctggcaagtacagc
atcctggtaaagaacaagtacggtacggagagcggcgatttcaccgtaagtgtcttcatg
ccagacgaggaacatggcaagaaaaaataa
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integrated database retrieval system
