Ctenopharyngodon idella (grass carp): 127515536
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Entry
127515536 CDS
T08802
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127515536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127515536
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
127515536
REST complex
127515536
Heterochromatin formation proteins
Other heterochromatin formation proteins
127515536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
CPDase
Motif
Other DBs
NCBI-GeneID:
127515536
NCBI-ProteinID:
XP_051755277
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All DBs
Position
7:complement(18228795..18254942)
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AA seq
1264 aa
AA seq
DB search
MKRRLEDQDTVIGSQRRLPGGVDSFQHRVLNSASQSSLYVTAPDNMQPSSSMQYSVSQTY
QLSMAQSSGGHGHTSSSAVHSGPHHHGPAVQPVGQGHSHATPAPAPTLGQQQFQRLKVED
ALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQRSAIDTPGVISRVSQLFKGHPDLIMGFN
TFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQDLPITQPAQRQTQPAAPTSTAALV
IPSQPTPAKISKPMQSPALTPTSQPNPSIPSYASPRSPSVQSHTPISSSTAGSTPLQNNQ
PVEFNHAISYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGHYTPTLTEQQVYA
QVAQLFKNQEDLLSEFGQFLPDANSSALLSKTTAEKAESVRLDRGGTVKRPQPNHKQSFN
QNGCQIRRHTGTPTTPPVKKKQKFMGKDSMAEASKLGIGAESLFFEKVRKALRSSEAYDN
FLRCLVIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGYRECPHIESFPKERATEGI
AMEIDYASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKK
TQYEEHIYRCEDERFELDVVLETNLATIRVLETVQKRLSRMSAEEQAKFRLDNTIGGSSE
VIHRKAIQRIYGDKAPDIIDGLKTNPAVSVPIVLKRLKIKEEEWREAQRGFNKIWREQNE
KYYLKSLDHQGINFKQNDTKVFRSKTLLNEIESLYDERQEQASEDNAAAPSGPHMSLMYE
DSQILEDAAALIIHHVKRQSSIHKDDKYKIKQIIYHFIPDMLFARRGELSDVEEEEEEET
EPDEDGTKKHNGTTSAKSKLLFSHTAATQQKLSNCDDAYNLFYVNNNWYIFLRLHQILCS
RLLRIYGQAEKQIEEDAREREWERNVLGLKREKNDSPAIQLRLKEPMDIDVEDYYSAFLE
MVRNLLDGNMETSQYEDQLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLY
LGECSNKATGGSLSTQTSRGTAETSYQRKAEQLMSDENCFKLLFQKSKGTVQLAVELLDS
EEENSDGPVDTERWPDYVERYLNTSSASPELREHLSQKPVFLPRNLRRIRKCQRGQEVQM
REGKETAKKSSEGSEDSKMECMFKLNSYKMVYVFKSEDYMYRRTAQLRAHQSHQRVSTRL
HQRFQVWLDRWRKDHVTSDMAAATYKWLMGEGREGLLPCRTVCEPKILHFQNINKYKVTY
STTL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtttggaggatcaggacacagtgatcggctctcagcggcggctccccggg
ggtgtggacagctttcagcaccgcgtcctcaactctgcctcccagtcctccctctacgtg
actgcaccagataacatgcagccatcatccagcatgcagtactctgtctcacagacctat
cagttgtcaatggcccagagttctgggggacatggtcacaccagcagttcagctgtgcac
agtgggcctcatcatcatgggccggctgtccagcctgtgggccagggtcactctcatgct
accccagcccctgccccaacactgggccaacagcagtttcaaaggcttaaggttgaagat
gctctttcctatctggatcaagttaaacttcagtttggcaatcagccgcaggtctacaat
gacttcctggatatcatgaaggagttcaagtctcaaaggtcagccattgatacaccaggt
gtgatcagcagagtctcccagctcttcaaaggccatccagacctcattatgggcttcaac
accttcctgcctcctggctacaagattgaggttcagaccaacgatctggttaatgtgacc
actcctggccagatccaccacatcaccccgcatggtatctctgtccaggacctccccata
acacagccagcacagcgccagacccaaccagcagctcccaccagcactgctgccttggtc
atccctagccagccaacccctgccaagatcagcaagccaatgcagtctcccgcacttacc
ccaacaagccagcctaatccgtccattccctcgtacgcctccccgcgctcaccctcggtc
cagtcccacactcccatcagcagcagcactgccggttcaaccccgttacagaacaaccag
cctgtagagttcaaccacgctatcagctacgtgaacaaaatcaagaaccgatttcagggc
cagccagaggtctacaaatccttcttggaaattctgcacacataccagaaggagcagcgt
aatgctaaggaggcagggggacactacacacccactctcacagagcagcaggtgtatgct
caggtggcccagctcttcaagaaccaggaggacctcctttcagaatttggccagttcctg
ccagatgctaacagctcagcgttattgagtaagactacagccgagaaggctgaatctgtg
cgtcttgatcgtggagggacggtaaagagaccccagcctaaccataaacagagttttaac
cagaatggctgtcagatccgcagacacactgggacacccactacaccccctgttaagaaa
aagcaaaagtttatgggaaaagattcaatggctgaagccagcaaacttggaattggtgct
gaatctctcttttttgaaaaggtgcggaaagcactgcggagttcagaggcttatgacaat
ttcttacgctgtttggtcatcttcaatcaagaagtgatctctcgggctgaacttgtgcag
ttggtcttaccatttttgggaaaattcccagagctttttacatggttcaagaacttcctc
ggctacagagagtgtccccatattgagagctttcccaaagagcgagccactgaaggcatt
gcaatggaaattgattatgcgtcctgcaagagattgggctccagttacagagccctaccc
aagagcttccagcagcctcgatgtacaggcaggactccactgtgcaaagaggtgttgaat
gatacgtgggtgtcatttccttcctggtctgaagactcaacctttgtcagctccaaaaag
acccagtatgaagagcatatatatagatgtgaagatgagcgctttgagcttgatgtggtt
ctggagacaaatctcgccactatccgtgttctggagactgttcaaaagaggctttcgcgc
atgtctgctgaggaacaagccaagttccgactggacaacaccattggaggctcctctgag
gtcatccaccgtaaagctattcagaggatatatggtgacaaagctccagacatcatagat
ggactcaagaccaaccctgctgtctctgtacctattgtactcaaaaggctgaaaattaaa
gaagaggaatggcgagaggctcagcgtggcttcaataagatctggagagaacagaatgag
aagtattacctgaagtctttagatcaccaaggtattaacttcaaacagaatgacacaaag
gtgtttcgctccaagacgctgctcaatgaaatcgagtctctttatgatgagcgacaggag
caggcttcagaagacaatgccgccgctccctcaggccctcacatgtcccttatgtacgag
gacagccagattctggaagacgcagctgctctcatcatccaccatgtcaagaggcagtcc
agcatccacaaagacgacaaatataaaatcaaacagatcatctaccatttcatccctgac
atgctgttcgcccggcgtggtgagctttctgatgtggaggaggaggaagaagaggagacc
gaaccagatgaagacgggactaaaaagcacaatgggacaacgtcagcaaagtctaagctc
ctcttcagccatacagcagctacccagcagaagctgagtaactgtgacgatgcctacaac
ctcttctacgtcaacaataactggtacatcttccttcggctgcaccagatcctgtgctcc
cgactgctacggatctacgggcaggcggaaaaacagatcgaggaagacgccagagagagg
gagtgggaaaggaacgtgctgggattgaaaagagagaagaacgacagcccggccatccag
ctgcgtttgaaagaacccatggacatcgacgttgaagactactattctgccttcttggag
atggtgcgaaaccttctggatggcaacatggaaacatctcaatacgaggaccagctgagg
gaaatgtttaccattcacgcctacattgccttcaccatggacaaactcatccagagtata
gtgagacagctgcagcatatagtaagcgatgagatctgtgtacaggtgactgatctttat
cttggtgagtgttccaacaaagccaccggtgggtccctgtccacccaaacatccagaggt
acggctgagacatcctaccagcgcaaagccgagcagctgatgtccgacgagaactgtttt
aagttactgttccagaagtctaaggggactgtgcagctggctgtggagctgttggactca
gaagaagagaactcggatggacctgtggatactgagcgctggcccgactatgtggagcga
tatctgaacaccagctcggcctctccagagctgcgagagcacctctcccagaagcctgtg
tttctccccaggaatctaaggcgaatccggaagtgccagagaggtcaagaggtgcagatg
agagagggcaaagaaacggccaagaaatcctctgagggcagcgaggactcaaagatggag
tgcatgtttaagctcaactcctacaagatggtgtacgtcttcaagtcggaggactacatg
taccgacgcactgcacagctgagagcgcatcagtctcaccagcgagtaagcactcgtctg
catcagcgctttcaggtgtggctggacaggtggcggaaagatcatgtgaccagcgacatg
gcagccgccacgtacaagtggctgatgggagagggccgggaggggctgctgccctgcaga
accgtctgtgagcctaagatcctccacttccagaacatcaacaaatataaagtcacctac
agcactacattgtaa
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integrated database retrieval system
