KEGG   Ctenopharyngodon idella (grass carp): 127515567
Entry
127515567         CDS       T08802                                 
Name
(RefSeq) caprin-1a isoform X1
  KO
K18743  caprin-1
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127515567
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     127515567
SSDB
Motif
Pfam: Caprin-1_C Caprin-1_dimer
Other DBs
NCBI-GeneID: 127515567
NCBI-ProteinID: XP_051755337
LinkDB
Position
7:4182196..4193199
AA seq 672 aa
MPSVTTGDNAVHSSSPDSGSAPSEALKQVLVVIDKKVRNMEKKKSKLDDYQTRKNKGERL
NHDQLEALSKAPEVAHNLDFARELQKNFLALNVEIQKTVKKATRREQLKREEAERKRLKA
VLEVQYLLEQLGEESVRQDLTQSSGDAPLLTESELTGLDEFYKLIGPERDSSVRLAEQFE
EASIHLWELLEGRDKAVAGTTYKALKETLDKMLLSGYFDRAQTHQNGVCEEETGAAAAAE
SSESEDRPAEPEGTAQEYTETIEVESTEFVNRQFVPETTYSSSDKEQGAEWNTSSQAVSA
LQQPQQPPAAMSPALVSSEPHTLNAVLPPPATDPVVRKQAVQDLMAQMQGTFNFMQDSML
EFEGPPLDPAIVSAQPMKPAQMVCPPESRLPQHNALSVQPEHAQVPMVSSTPPLYQPPHN
SEPRPQTDSIDPLQVSMPLSSEQSPTPSSQPQVFQPVSKPLHSGINVNAAPFQSMQAVFN
MNAPVPPTSEMDSQKISSQYQSSYGQGYSTQANLPAEQQEMPQEALQSVVGPFHSQDQGI
PSAGGHQSAPQQPSGQGTGFGRPGQSFYSNRAMPRGGPRTPRGALNGYRGPSNGFRAGYD
GYRAPFPNTPNTGYGQTQFSTPRDYSNTYQRDGYQQSFKRGATQGPRGCSRGRGGSYRPS
RGMGPMAAQQTS
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgccatcagtgaccactggcgacaatgctgttcactcctccagtccggattcgggctct
gcgccatctgaagccctcaagcaagttcttgttgtaatcgacaagaaggttcgcaacatg
gaaaagaaaaagagcaagctggatgattaccagacaagaaagaacaaaggagaacgcctc
aaccacgatcagctggaggctttatctaaagctccggaggtggctcacaacttggacttt
gcccgtgagttgcagaaaaacttcctggctttaaatgtggagatccagaaaacggtgaaa
aaggcgacacgacgggagcagttgaagagggaggaggcagagcgcaagagactgaaggca
gtgctggaggtgcagtacttgctggagcagctgggggaggagagcgtgaggcaggacctg
actcagtccagtggggatgcccccttgctcacagagtcagagctcacgggcctggacgag
ttctacaagctaattgggcctgagcgggactctagcgtgaggttggctgagcagtttgag
gaagcatccattcatttgtgggagcttttggaaggaagggataaagctgtggctggaacc
acatacaaagcccttaaggaaaccttggacaagatgctgctaagtgggtactttgatcgt
gcccaaacacatcagaatggagtgtgcgaagaagagacgggggctgcagcagcagcggag
tcatcagagagtgaggaccgccccgctgagccagagggaaccgctcaagaatacacagaa
actattgaggttgaatcaacagagtttgtaaacagacagttcgttccagaaactacctac
agcagcagtgacaaagaacaaggagcagagtggaacacaagttctcaggcggttagtgcc
cttcagcaaccacaacagccacctgccgccatgagcccagctttggtcagctcagaacca
cacacactgaacgccgtcctccctcctcctgcaacagatcccgtggtccgaaagcaagca
gttcaagatctcatggctcaaatgcagggtaccttcaacttcatgcaggactctatgctg
gagtttgagggaccgcctttagatcctgcaattgtgtcggcacagcccatgaaacctgct
cagatggtctgtccgccagaatccagactgccccaacacaatgctctttctgtgcagcct
gaacatgcgcaagttccgatggtctcctccacgccccctctctatcagccccctcataac
tctgagcctcgaccgcagacagactccattgaccccctgcaggtctccatgcccctgtcg
tctgagcagtcccccaccccttcctctcagccccaggtgtttcaacctgtctccaaaccc
cttcacagtggcatcaacgttaacgcagctccattccagtccatgcaagcggtgttcaat
atgaatgctccagttcctccaaccagtgagatggactctcagaagatttctagtcaatat
cagagcagttacggtcaaggctacagcacacaggccaaccttccagccgagcagcaggaa
atgcctcaagaagccctgcagtcagtagttggccctttccattctcaagaccaaggtatt
ccgtctgcagggggacaccagtctgcacctcagcagccctcggggcagggcacagggttt
gggcgtccaggtcagtccttttacagcaacagagcaatgccacgaggtggacccagaact
cctagaggggctttgaatggctaccgtggaccatcaaatggatttagagctggatacgat
gggtatcgtgctccattccccaacactcctaacaccggatatgggcaaactcagttcagc
acgccgcgagattactccaacacctaccaacgggatggatatcagcaaagcttcaagcga
ggggctacccagggacctcgaggttgctctcgaggacgtgggggatcatatcggcccagc
agaggaatgggtcccatggccgcccaacagaccagctaa

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