Entry |
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Name |
(RefSeq) caprin-1a isoform X1
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KO |
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Organism |
cide Ctenopharyngodon idella (grass carp)
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Brite |
KEGG Orthology (KO) [BR:cide00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cide03019]
127515567
Messenger RNA biogenesis [BR:cide03019]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127515567
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
7:4182196..4193199
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AA seq |
672 aa
MPSVTTGDNAVHSSSPDSGSAPSEALKQVLVVIDKKVRNMEKKKSKLDDYQTRKNKGERL
NHDQLEALSKAPEVAHNLDFARELQKNFLALNVEIQKTVKKATRREQLKREEAERKRLKA
VLEVQYLLEQLGEESVRQDLTQSSGDAPLLTESELTGLDEFYKLIGPERDSSVRLAEQFE
EASIHLWELLEGRDKAVAGTTYKALKETLDKMLLSGYFDRAQTHQNGVCEEETGAAAAAE
SSESEDRPAEPEGTAQEYTETIEVESTEFVNRQFVPETTYSSSDKEQGAEWNTSSQAVSA
LQQPQQPPAAMSPALVSSEPHTLNAVLPPPATDPVVRKQAVQDLMAQMQGTFNFMQDSML
EFEGPPLDPAIVSAQPMKPAQMVCPPESRLPQHNALSVQPEHAQVPMVSSTPPLYQPPHN
SEPRPQTDSIDPLQVSMPLSSEQSPTPSSQPQVFQPVSKPLHSGINVNAAPFQSMQAVFN
MNAPVPPTSEMDSQKISSQYQSSYGQGYSTQANLPAEQQEMPQEALQSVVGPFHSQDQGI
PSAGGHQSAPQQPSGQGTGFGRPGQSFYSNRAMPRGGPRTPRGALNGYRGPSNGFRAGYD
GYRAPFPNTPNTGYGQTQFSTPRDYSNTYQRDGYQQSFKRGATQGPRGCSRGRGGSYRPS
RGMGPMAAQQTS |
NT seq |
2019 nt +upstreamnt +downstreamnt
atgccatcagtgaccactggcgacaatgctgttcactcctccagtccggattcgggctct
gcgccatctgaagccctcaagcaagttcttgttgtaatcgacaagaaggttcgcaacatg
gaaaagaaaaagagcaagctggatgattaccagacaagaaagaacaaaggagaacgcctc
aaccacgatcagctggaggctttatctaaagctccggaggtggctcacaacttggacttt
gcccgtgagttgcagaaaaacttcctggctttaaatgtggagatccagaaaacggtgaaa
aaggcgacacgacgggagcagttgaagagggaggaggcagagcgcaagagactgaaggca
gtgctggaggtgcagtacttgctggagcagctgggggaggagagcgtgaggcaggacctg
actcagtccagtggggatgcccccttgctcacagagtcagagctcacgggcctggacgag
ttctacaagctaattgggcctgagcgggactctagcgtgaggttggctgagcagtttgag
gaagcatccattcatttgtgggagcttttggaaggaagggataaagctgtggctggaacc
acatacaaagcccttaaggaaaccttggacaagatgctgctaagtgggtactttgatcgt
gcccaaacacatcagaatggagtgtgcgaagaagagacgggggctgcagcagcagcggag
tcatcagagagtgaggaccgccccgctgagccagagggaaccgctcaagaatacacagaa
actattgaggttgaatcaacagagtttgtaaacagacagttcgttccagaaactacctac
agcagcagtgacaaagaacaaggagcagagtggaacacaagttctcaggcggttagtgcc
cttcagcaaccacaacagccacctgccgccatgagcccagctttggtcagctcagaacca
cacacactgaacgccgtcctccctcctcctgcaacagatcccgtggtccgaaagcaagca
gttcaagatctcatggctcaaatgcagggtaccttcaacttcatgcaggactctatgctg
gagtttgagggaccgcctttagatcctgcaattgtgtcggcacagcccatgaaacctgct
cagatggtctgtccgccagaatccagactgccccaacacaatgctctttctgtgcagcct
gaacatgcgcaagttccgatggtctcctccacgccccctctctatcagccccctcataac
tctgagcctcgaccgcagacagactccattgaccccctgcaggtctccatgcccctgtcg
tctgagcagtcccccaccccttcctctcagccccaggtgtttcaacctgtctccaaaccc
cttcacagtggcatcaacgttaacgcagctccattccagtccatgcaagcggtgttcaat
atgaatgctccagttcctccaaccagtgagatggactctcagaagatttctagtcaatat
cagagcagttacggtcaaggctacagcacacaggccaaccttccagccgagcagcaggaa
atgcctcaagaagccctgcagtcagtagttggccctttccattctcaagaccaaggtatt
ccgtctgcagggggacaccagtctgcacctcagcagccctcggggcagggcacagggttt
gggcgtccaggtcagtccttttacagcaacagagcaatgccacgaggtggacccagaact
cctagaggggctttgaatggctaccgtggaccatcaaatggatttagagctggatacgat
gggtatcgtgctccattccccaacactcctaacaccggatatgggcaaactcagttcagc
acgccgcgagattactccaacacctaccaacgggatggatatcagcaaagcttcaagcga
ggggctacccagggacctcgaggttgctctcgaggacgtgggggatcatatcggcccagc
agaggaatgggtcccatggccgcccaacagaccagctaa |