Ctenopharyngodon idella (grass carp): 127515734
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Entry
127515734 CDS
T08802
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04512
ECM-receptor interaction
cide04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127515734
04518 Integrin signaling
127515734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cide04091
]
127515734
Lectins [BR:
cide04091
]
C-Type lectins
Lecticans
127515734
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
127515734
NCBI-ProteinID:
XP_051755657
LinkDB
All DBs
Position
7
Genome browser
AA seq
2168 aa
AA seq
DB search
MTAIDRTYLPFLFLGLLHQIQGSLVKTNLGLKVKRGQSVFLQEGDLQFHIPRDKDACKLE
VVLNEPITQRVGTLSPQVFDCHFLTDEVKYTHNGCPILKKDTVKLRLYRFTETETYSELF
SLGVEIMEPDCNVIRFGSQNLEVPEFYGLSNILDGNVVSFHYEHRHNIECTVRVTTLETH
LPVHGQLVTGEPEKPEGPRGDEPDSFVPLRRQLDNKARAHCKSDDCLKGLKLLKIAKVPC
NDFLMMGIRYQHIDPPSPDIDYIAIRLDLTDTRSRSIIQSEQAWIPVTIKDAMPNQPPKP
AFMSMFILEVDQFILTPLSTATLDAEDDETPKQRLVFNITNPPNEGFITHLSDHTKPISS
FTWMDLNDMLISYQPPNSSHTQRRNYEVEFEVHDFYFEKSQPVMVHVSIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQLQIVDNDNLKAVKIITVDGLQHGRLTVRGGKGFMFTVNDIK
DGAVHYHHDDSDTTKDYIVFRITDGLHQTRHKFPINILPKDDSPPFLITNMVLELSEGQT
GLLRGSILQACDMDSSDDYIMFNITRPPQAGEIMKMPGPGITGYPVTRFLQKDLFHSIIY
YRHSGSEVFDDSFEVVLSDFHDPPNLSEPQVIVIQILPVPDQPPQEAPGVTRHLVVNETD
VTYLTKQQLHFVDLESPDSELTYTVTTPPFYSTTYGGSDAGRLFLVDSIPKFNKDPNAPM
LRLFTQNAVNYMKVAYMPPILDIGPYPQHIQFVLSVTNQQGSTTAGICFNITILPVDNLA
PEVHVRQLTVDEGGESWLSEEHMRLMDQDSLEDSLHVKLKTEPQHGSIYLDGTPMSPGQT
FTVKDLKNLKVRYRHDSSETEHDDIKFIATDGINIADFVLDVKVTLVNDEVPVLVPGLKP
ILACAEGQEVVITMEYICATDPDSDDSTLMYMIARQPYHGVVQRNGIVVDRFIQADITAG
LISYRHTGQEIGLQPRHDVVTFVISDGESGLLPSCCSDKSTLFPAQTPEVQNSLPVYDLN
ITVYPVNNQPPSIAVGEVFKVDEGGSASITVTHLRVEDQDSAPEDLKLILVAPPQFGYIE
NILPSPGFEKSNMGISIACFTYRDVLNGHINYVQSRHQRMEPTTDQLMLHVSDGKQQSSS
VPFYIIISPINDEIPDFLARNITVREGDMKELDPSIISAVDLDVPRDRLMFSIVQQPQHG
SIMSVPHGNDVTHYKRGSEIPVEHFTMDDLRSGMTLMYMHDDSESEQDGFIVQLSDGKHQ
LQKHVQVKVLPVNDEEPQIIRNTGIEIEAGESRLISSAVLSAHDKDTSSSDIIYVFESIP
SHGVIQMKVGTDWVSVSAGMNCSQQVLDMNLLRYLHTSHPGAPAADFFVFHLLDGKNRSP
AQHFHITVKEMEKGDIALFLKPVRSSRGERVVLTTDVLLAVDGTDKPEELLYVITVPPAH
GHVEYIKHTGVQIQSFSQLDVAANLVCYVHDNRATSPKETLQFVVSNGVSTRNGTLEILV
ELTDKVLPTLVHNTGLRVPQGSTITLTPDALFLSDPDSPHTALSYKVVHPPQYGQLLLKG
QPLVAGSSFTQQNIQDLVVAYRHSGGASQIDRFRFTASDSTERGFLLDGKVQTEPVFFTL
QIEALDSSAPQIAVLEILWKVELLKDGRYGIFISSRELKAQDINSADGDLIYHILRSPYF
GYLENYTNGEFVRHRFSQRDLNRRNILYIINCALDALTDSLEFAVSDALGNTGPSHKLEF
SWASVELTRTEYVICESQGSVSLTIQRKGNVQDSSYVTVQVKELTASAGKDFVTASSLIQ
FDPGMVSRVWKVEIVQDSLEEADEKFEVTLVSPVGAVLKDKSKATIFIKDTNGQCRENQI
KAGTSIQGQEVQPGPYPQHGSIQVETLPFSQGFIRGDGDIIVEAPSTTKKRLRVIGNGKV
VQPSETIRHGSDVIYRYHGIVSMAVEEDKADSRTDRKAHVQVTSWGQQRSPAVRTKLQQT
ASHANARVSQPFVTQPSSKPCTPELNGFLHYNDSLGQLFRCNGDSWRPWTPTNETVKAQK
CPRGWTYHNNYCYILSTQRKATWSAAVRACRESFNGNLVSVLSKADMDWLWDFSERKPFW
IGLNDRESTGRWEWVGGEPVTYTNWRQSPPKNRKKGTRKCVLVWRKTKWQIRDCKKGKGH
RYVCYVKM
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgactgctatagacaggacatatttgcctttcctctttctgggacttctccaccagatt
cagggctctctggtaaaaaccaatcttggtcttaaggtgaagagggggcagtcagtcttt
ctgcaggaaggggacttgcagtttcatatacccagagacaaggatgcctgcaagctggaa
gttgtgctgaacgagcccattacacagcgggtcggcacactgtccccacaggtttttgac
tgtcactttttgactgatgaagtgaaatacactcataatggatgtccgattttaaaaaag
gatactgttaaacttcgtttgtacagatttacagagacagagacctacagtgagctgttc
tctctcggtgttgaaatcatggagcctgactgtaatgtgattaggtttggatcacagaat
ctcgaggtgccagagttttatggcctctccaatatcctggacggtaatgttgtgtccttc
cactatgaacatcgacataatattgagtgcacagttcgggtgacaactttggagacgcat
ctacctgttcacggtcaactagtcactggggaaccggagaaaccagagggaccgagaggg
gatgaaccagatagctttgttcctcttcgaagacagctggataataaagctcgagctcat
tgtaaaagtgacgactgtctaaagggtcttaaactgctgaagattgccaaagtaccatgc
aatgatttcctcatgatgggcatccgctaccaacacattgaccctccatctccagacata
gattacatcgctattagactggacctcacagacactcgtagcaggagcataattcagtcg
gagcaggcctggatcccggtaaccattaaagacgctatgcccaatcagccgcccaagcct
gctttcatgtccatgttcatcttagaggtggaccagttcatcctgactcctctctccacg
gcaactctggatgcggaggatgatgagacgcccaaacagaggctggtgttcaacatcact
aacccccctaatgagggcttcattactcatctgtctgatcacaccaaacccatctcctcc
ttcacctggatggatctcaacgatatgctgatcagctaccagcctccaaactccagtcac
acgcagcgtaggaactatgaggtggagtttgaggtgcatgatttctactttgagaaaagc
cagcctgtgatggtacatgtgtcaatcaggacagctgataccaatgcgccaagagtatca
tggaatatgggtctcagtctgttggaaggtcaatctcgtccaatcacatgggatcagttg
cagattgttgacaatgacaacctgaaggctgtgaagatcatcactgtggatggcctgcag
catggcagactaactgttagaggtggaaaaggtttcatgttcactgtgaatgatattaag
gatggtgcggtacactaccatcatgatgacagtgacactactaaagattatatagttttc
cggattactgatggtttacatcaaactagacacaagtttcccatcaacatcctgcccaaa
gatgacagtccacccttcctcattaccaatatggtgctggagctgtctgaaggtcagacg
ggtcttttgagaggatccattttgcaagcctgtgatatggactccagtgatgactacatc
atgttcaacatcaccagacctcctcaggcaggggaaatcatgaagatgcctggtcctggg
ataacaggataccctgttacacgttttcttcagaaggacctctttcattctatcatctac
tatcggcactcaggcagtgaggtgtttgatgactcttttgaggtggtgctctctgatttt
catgatcctcctaatctttcagagcctcaggtcattgtgattcaaatcctgccagtacct
gatcagcctccacaagaagcaccaggtgtgaccaggcacttggttgtcaatgagacagat
gtcacctacttgaccaagcaacagctgcactttgttgacttggagtcaccagatagtgag
ctcacatacaccgtcaccaccccacctttctacagcaccacctatggagggtctgatgca
ggaaggttgtttctggttgatagtattccaaaatttaacaaggacccaaatgccccaatg
ctgagacttttcactcagaatgcagtcaactacatgaaagttgcttacatgccccccatc
ctggacattggaccctaccctcagcacatccagtttgtcctgtcagtgaccaaccagcaa
ggcagcacgaccgctggaatctgcttcaacataacaattctgccagtggataacctggca
ccagaggtacatgtgaggcagttgacagtggatgaagggggagagagctggttgagtgaa
gaacacatgcgtctaatggaccaggactcgctcgaggactctctgcatgtgaagctgaaa
acggaacctcagcatggcagtatttacctggatggcacacccatgagtccaggccagact
tttacagtcaaggatctgaaaaacctaaaagttagatatcgccacgacagttctgagaca
gaacatgatgatattaaattcattgccacagatgggataaatattgctgactttgtacta
gatgtcaaggtgacgctagtcaacgatgaggtgccagtgctagtgccaggtttgaaaccc
attttagcctgtgcagagggacaggaagtggtcatcaccatggagtacatctgtgccaca
gatcctgacagtgatgatagcacattgatgtatatgatcgcccgacaaccatatcatggg
gtagttcaaagaaatggcatcgtggtggaccgcttcattcaagcagatataactgctggc
ttaatttcctatagacacacaggacaagagattgggctacaaccacgccatgacgttgtc
acgtttgtaatctcggatggagagtcagggctacttccttcctgttgcagtgacaaatcc
actttattccctgcacaaacacctgaagtacagaactccctgcctgtctatgaccttaat
atcaccgtttatcctgtgaacaaccaaccaccatctattgctgttggagaggtgtttaag
gtggatgagggagggtcagcctccatcacagtgacccatctgagagttgaagaccaagac
tctgctccagaggatcttaagctcatcctggttgctcctccacagttcggctacatcgag
aacatcctgcccagtccaggatttgaaaagagcaacatgggaatcagtattgcctgtttc
acctacagggatgtgttgaatggacacataaactatgtccagtctagacaccagaggatg
gagccgaccactgaccagctcatgctgcatgtgtccgacgggaaacagcagtcctcttca
gtaccgttctacatcatcatcagtccgatcaatgatgagattccagacttcctggccaga
aacatcacggttcgagagggagacatgaaagagttggacccatctataatcagtgcggtg
gatcttgatgttcccagagaccgtttaatgttcagcatagtccagcagcctcagcacggc
tccatcatgagtgtcccacatggcaatgatgtaacacactacaagcgcggatctgagatc
cctgtggagcacttcaccatggacgacctcaggagcggcatgactctgatgtacatgcac
gatgactctgagagtgagcaggacggatttattgttcagctctctgacggaaaacaccag
ctccagaaacacgtgcaggtcaaagtactgcctgtcaatgatgaggagccgcaaattata
cggaacactggcattgagatcgaggctggggagtccagactgatctccagtgctgtgctt
agcgcccacgacaaagacacttcttcttcggacatcatctatgtgtttgagagcataccg
agtcatggtgtcattcagatgaaggttggcacagactgggtgtctgtatctgcaggaatg
aactgctctcagcaagttttggatatgaatctgttacgttaccttcacaccagtcatcct
ggagcacctgctgctgacttctttgtcttccatctgttggatggcaagaaccgctctcct
gctcagcacttccacattacagtcaaagaaatggagaaaggagacatagcattgttcctg
aagcctgtgagatctagtcgtggggagcgtgtggttctcaccacagatgtcttgctggcg
gtagacggcactgacaagccggaggaactgctctacgttatcactgtacctccagcacat
ggacatgtggagtatattaaacacactggcgtgcaaattcagtcgttcagtcagctggat
gtagcagcaaacctggtgtgttatgtacatgacaacagagccacttcaccgaaagaaacc
ctgcagtttgtggtcagcaatggcgtatcaactcgcaacgggaccctggagatcttagtg
gaattgactgataaggttctgcccacactagtgcataacactggtctacgggttccccag
gggtccaccataactttgacacctgatgccttattcctgtctgaccctgacagcccacac
actgccttgagctacaaggtcgtccaccctccccagtatggccagttgctcttgaaggga
cagccactggtcgctggtagcagttttacccagcagaatattcaggatctggttgttgca
tacagacactctggaggagcttctcagatcgatcgcttcagattcacagcctccgacagc
acagaaagaggcttcctgctggacggaaaagtgcaaactgagccggtcttcttcactctg
caaattgaagctctcgacagctctgctccacagatagcagtgctggaaatcctgtggaaa
gtggagctcctcaaagatggtcgttatgggatctttatttcctccagagagcttaaggct
caggatataaactcggcagatggtgatctgatctatcacatcctcagatcgccttacttt
gggtacctggaaaattataccaatggtgagtttgtgaggcatcgtttctctcagagggat
ctgaacagaaggaatattctctacattataaactgtgctctggacgctttaactgacagc
ctggagtttgctgtttctgatgcactgggcaacactggaccctctcacaaattggagttc
agctgggccagtgtggagctgaccaggactgagtatgtaatatgtgagagtcaggggtca
gtctcactaaccatccagaggaaggggaatgtgcaggactcgtcttatgtgactgtacag
gtgaaagaactaacagcatctgctggaaaggattttgtaacggcttcatctttgattcag
tttgacccagggatggtcagtcgagtatggaaagtggagattgttcaggattctttggag
gaagctgatgagaaatttgaggttaccttggtatctccggtgggtgcagtgctgaaagac
aaatcaaaagccaccatcttcataaaggacacaaatgggcagtgcagagagaaccagatc
aaagcaggcactagcattcaaggccaagaggttcagccagggccgtaccctcaacacggc
tccatccaggtggaaacgttacctttctctcagggctttatcagaggtgatggagatata
atagttgaagctccctccactacaaagaaaagactcagagtcattgggaatgggaaagtg
gttcagccttcagaaaccattcgtcatggatctgatgtaatttacagatatcatgggatc
gtgtcgatggcagtggaggaggacaaagctgactcaaggactgacagaaaggcacacgtg
caggtaaccagctgggggcagcagcgctctcctgcggtcaggacaaaactacagcaaact
gcctcacatgcaaacgccagagtttcgcagccttttgtgactcagccttcctctaaaccc
tgtactccagagctcaatggctttctccattacaatgacagcttaggtcagctgtttcgc
tgtaatggtgactcctggaggccctggacacctactaatgagactgtgaaagcacagaaa
tgtcctcgaggatggacataccacaacaactattgttacatactgagcacacagcgcaaa
gccacgtggagcgctgcggtgcgggcctgcagagagagcttcaatggaaacctggtcagt
gttttgtcaaaagcagacatggactggctgtgggacttcagtgaaagaaaacccttttgg
attggtctgaatgatcgtgaaagtacaggccgctgggagtgggtgggtggagagcccgtc
acttacaccaactggaggcaaagcccgccaaaaaacaggaagaagggaacaaggaaatgt
gtcctggtctggaggaagacgaaatggcagatacgagactgtaagaaaggaaagggacac
cgctatgtgtgttatgttaaaatgtga
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