KEGG   Ctenopharyngodon idella (grass carp): 127515746
Entry
127515746         CDS       T08802                                 
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127515746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cide03400]
    127515746
Enzymes [BR:cide01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     127515746
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     127515746
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     127515746
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127515746
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     127515746
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA
Other DBs
NCBI-GeneID: 127515746
NCBI-ProteinID: XP_051755680
LinkDB
Position
1:complement(40761994..40765597)
AA seq 344 aa
MPLCLLVSEDDPHKPIQLPHQQAVTLGRGPETKIKDKKCSREQVEFRADCNRGFVSVKQL
GVNPTNVDNVVVGRGNQVTIKPGQRLYMVNQMYPYTVKFTEQTFTPRSAAEGSKASKRSH
QMSCEGNGEKIKSPAKTTSTSSSRTSDTSPPPKKTPPPGPDKSESAGHWSQGLKVSMQDP
KMQVYKDDTVVVIKDKYPKARYHWLVLPWDSISSLKALRSEHVDLLKHMQRVGDQMVQQC
RDAHKLRFRLGYHAVPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFVESQDVVTMLE
RDGKVTVKDGASELLKLPLRCHACHKEQPTIPKLKEHLKTHMPA
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgccactgtgcttactagtaagtgaagatgatccacataaacccattcagcttcctcat
caacaagctgtgactttgggtcgaggaccagaaactaagataaaagacaaaaagtgctca
agagaacaagttgaattcagagctgattgcaacagaggatttgtctctgttaaacagttg
ggtgtgaatcctacaaatgtggacaatgtggttgtgggcagaggaaatcaggtgaccata
aagccgggccagagactttacatggtcaaccagatgtatccatatacagtgaagttcacc
gagcagacgttcacacccagatccgctgcagaggggagcaaagcctccaaaagatcccat
cagatgagctgtgaggggaatggagagaagatcaagagccctgcaaaaacaacatcaaca
tcctcctcccgtacatcagacacttcacctccaccgaaaaagacaccgccgcctggacct
gataaatcagaatctgctggccattggagccaagggcttaaagtgtcgatgcaggacccc
aagatgcaggtgtacaaagatgatacggtggtggtcatcaaggacaagtacccaaaggcg
cgttaccattggctggttttgccatgggactcgatctccagtctgaaggctctgcggtcg
gagcacgtggacctgctgaagcacatgcagcgtgtgggagatcagatggtgcagcagtgc
cgtgacgcccacaaactgcgcttccgtctgggatatcacgccgtccccagcatgagtcac
gtccacttgcatgtaatcagccaagacttcgactcgccatgtttgaagaacaagaagcac
tggaactccttcaccactgactattttgttgaatctcaagatgtcgttacgatgctggag
cgtgatgggaaagtgactgtgaaggacggcgctagtgaactactgaagctgcctctgcga
tgtcacgcgtgtcataaagagcagccgacgattcccaaactaaaagaacatctcaaaact
cacatgcctgcttaa

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