Ctenopharyngodon idella (grass carp): 127515803 Help Entry 127515803         CDS       T08802                                  Name (RefSeq) synaptopodin-2-like isoform X1   KO K24066   synaptopodin-2 Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cide00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     127515803  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:cide04990]     127515803 Domain-containing proteins not elsewhere classified [BR:cide04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    127515803 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Motif Other DBs NCBI-GeneID:  127515803 NCBI-ProteinID:  XP_051755824 LinkDB All DBs Position 7:42148531..42173895 Genome browser AA seq 1566 aa AA seqDB search MGTGEFVCVTLRGGAPWGFRLRQSAHDPQHPLQVLEIEDGSPAALAGLCENDELVSLNGK PCSNLSLSDAIDLIEASADCLQLLVKRCCSQPQESFEVVSTTFRIPSPSRLHDPHESQDV SESQDEAYYGETDSDGECPVGTRLVRTQVQIPASRNKGRGTCAQGGGDTSLDVTPGSVVE LQLSLSKTTLEEPDCTALGSACGVVGDIHHRKTDESINYTTTAFSSDRPLYTPRGERQPL SQWGVLVSKPRQVEVTVQQLSGSSSRKEGVEASERLDSGGEEGGHIEEAPTSSSVSFGLP SEEWDSESEREVNKPNKHRARHARLRRSESLSEKQVKEAKSKCKRIALLLSAPAPNPNNK GVLMFKKHRQRAKKYTLVSYGTGEDEPDYKDDEDDKEEHAVEFTVLATSETEIDEDFFTN ASVQKSIVSFDWDTGLLEIERKLDNKQDMEALPETKGKGALMFAQRRQRMDEIVAEHEEM RRKGIPVEAIQEPETHQTYQNMEESTYMHAQETENYMDVNLHSISAQKQQQQQHHQYQDQ YYQQQQQQQYQDYQQQLQYQQQQQQYQQQQDYQQQKMYQNIQSYNQQQHFQQQHVQQYSH HMNGMFDQQVQSEMQPTVTNRSAKPFSIQNRVAAPFSSTTSADNQEQSGYSLGQGEQIAS RDERISVPAIKTGILQDTKRRSANKPMFTFKESPKVSPNPALLNLLNRNDKKAGVESCPE EDYLSLGAEACNFLQPPKMKIPPPVAPKPHINPASPPWSVQEETTDQPIPQQTVNSVPEP AEAPVTEVDAAGAPTMSEEGPTLAPESQNVQHSPEHLAPSNAWKQPESQMELNQQPETWN EKQPQLQMNSAHPVAPPVTQSDPSARSWDPVPTQGHQQLPVSTWGPNEVQLQVPSQNQSQ TQPQWMTQSQGPSEVQLQVPSKTQSQPSWVTQSQTSPPTKHQPQPQSQISSWVPSSNQST PQATWSQPHEPAQPPINVWHQDQNQAQEQPPWTQQQQFQESQLMPHWASPPQQQPQPSWA QPQRQSQPQPPWVSQAKQQEPTQPSANAWTQPQSPVQAQPPWAQQTQPPPQPTAPVQQPM NPWPPMPAQSQPHPQWGQEPASQQHPQQVMNTWTPEQNQIQPPWAQPMPPTQPQAHPPWA PKPQQQASPPPVSQWVPPQSQSQPAVNVWAPQHQEGSVGNTAQTATQKLPSQPIKPWSPS QTTQPTPPRRMNSYTTGTKVPSPVPISSTMSPSGYGSAFEMPALRGKGAELFAKRQSRME KYIVDSTTVQSNKARPSSPTPSLPNSWKYSPNCRAPPPLAYNPIHSPSYPPGAIKQPPPS SPSTTNKNKSKEKGKPAPKPLHVLDVMKHQPYQLKSSLFTYGPAAEKLAAEKEAAEKLAA QKAAEAQAQAQAQIQAQALGAPNQNQQMTYNQDPPPYGFMPQPAQQPYGMAGQSPMHEGL YHQVPPDTYQPVLNAYQQHPHQVPFQQEYNPQQTYQQPPLNPYQQAPSPPYQQPSPPSYQ AGPNLVYQAGPALTYQPAPSSYVVPSFPVAARADSASGGSITAAPKPKFSAKKSAAQVWK PSTAEK NT seq 4701 nt NT seq  +upstreamnt  +downstreamnt atgggcacgggggagtttgtgtgtgtgacgctgcgtggcggcgcgccgtggggattcaga ctccgccagagcgctcacgaccctcaacatcctctccaggtgcttgagatagaggatggt agtcccgctgccctagctggattgtgtgagaatgatgaactggtgtcactgaatggaaag ccttgctctaacctcagtctctcagacgctattgatctcattgaggcctctgctgactgt ctacagctgcttgtcaaaagatgctgtagtcaacctcaagagagctttgaagtggttagt accacttttcggatcccttctccatccaggcttcatgacccccatgagtcccaggatgtc tctgagtcccaggatgaagcatattatggggaaacagacagtgatggagagtgtcctgtg gggacacgattggttcggacacaagttcaaatacctgcttctaggaataaaggtagaggc acctgtgcccagggtggtggagacacaagtttggatgtaaccccaggatctgtggtcgaa ttgcagctctcgctctccaagaccaccctggaagagccagattgtactgcattaggcagt gcttgtggagttgtgggagacatccatcatagaaagacggatgagagcatcaactatacc accaccgcattttcttcagataggcctctatatacaccccgaggagaacggcaacctctt agtcagtggggtgtgttggttagcaaaccaagacaggtggaggtgacagtgcagcagtta tctggaagcagttctagaaaggagggggtagaggccagtgaacggttggattctggtggg gaagaaggagggcacattgaagaagctcccacctcctcttctgtgtcctttggacttccc tcagaggagtgggactctgaatcggagagggaggtcaacaagcccaacaagcaccgggca aggcacgccaggctccggcgcagtgagagcctttcagagaagcaggtgaaagaggccaag tccaaatgcaagcgcattgctctcctgctgtctgcccctgcccccaaccctaataacaaa ggggtgttgatgtttaagaagcatagacagagggccaagaagtatacacttgtaagctac ggtactggtgaggacgagccagattataaggacgacgaagacgacaaggaggagcacgct gttgagttcactgttctagccacaagtgaaacagaaattgatgaggatttctttactaat gcctcagttcagaaaagcattgtgagctttgattgggataccggattacttgagatagag cgcaagcttgacaacaagcaggatatggaagcactacctgagaccaaggggaaaggagcc ctcatgtttgcccagcgcagacagcgcatggatgagatagtagctgaacatgaagagatg agacgtaaggggattcctgttgaagcgatccaggagcctgagacacatcagacataccaa aacatggaggagagcacttatatgcatgcacaagaaacagaaaattacatggatgtaaat ttacacagcatatcagcacaaaagcagcaacagcaacaacatcatcagtaccaagatcag tactatcaacaacagcagcagcagcagtatcaagactaccagcagcagctacaataccag caacagcaacaacagtaccaacaacagcaagactaccagcagcagaaaatgtatcaaaac atccaatcatacaatcagcaacaacacttccaacagcagcatgtgcaacagtattcacat catatgaatggcatgttcgatcagcaagtgcagagcgaaatgcagccgacagtcacaaac agaagtgccaaaccattttcaattcaaaatagagtggccgctccattttcctccaccaca agtgcagataatcaagaacaatctgggtattcattgggacaaggtgaacagattgcttcc cgtgatgagcgtatatctgtgcctgctatcaagactggtatcttgcaagatacaaagagg aggagtgccaataaacctatgttcactttcaaagagtctccaaaggtttcacctaatcct gctctgttgaatctcctcaacaggaatgacaagaaggcaggtgttgagtcttgcccagaa gaagattatttaagcttaggagctgaagcctgcaactttcttcagcctcctaagatgaaa attccaccaccagtagctcctaaacctcacattaaccctgcttctcccccatggtcagtt caagaagaaactactgaccaacccataccacagcaaaccgtaaacagtgtcccagaacct gctgaagctccagtcacagaggttgatgctgcaggggcccctaccatgtctgaagaagga cctacattagcacctgaatcccaaaatgttcaacattctcctgaacatcttgctccaagt aatgcatggaaacaaccagaatctcagatggaactgaaccagcaaccagaaacctggaat gaaaaacaaccccagctccaaatgaattctgctcatcctgtcgctccacctgttacgcag tcagatccatctgccagatcatgggatccagttccaactcaaggtcatcagcagcttcca gtaagtacttggggtccaaatgaggtccaattgcaagtcccatctcaaaaccagtctcaa acacagccacaatggatgacacagtctcagggtccttctgaagtacaattgcaagtgcct tctaaaacacaatcccagccttcttgggtaacacagtctcaaacttcacccccaaccaag catcaaccacagcctcagtcccaaatcagttcttgggtaccaagttcaaatcagtcaaca ccacaagccacttggtctcagccccatgagccagcacaaccacctattaatgtttggcat caagatcaaaatcaggctcaggaacagccaccctggacccaacaacaacagttccaagaa tcccagttaatgccacattgggcatcaccccctcagcaacagccacagccttcttgggct caacctcagaggcagtcacagccccaaccaccttgggtctctcaggccaaacagcaagag ccaacacagccatctgcaaatgcgtggactcaaccacagagtccagttcaagctcagcct ccatgggctcaacagactcaaccaccacctcagcccacagcaccagtgcagcaacccatg aatccttggccaccaatgccggcccagtcccaaccacatccacagtggggacaagaacct gcttctcaacaacatcctcaacaagtaatgaacacttggacacctgaacagaatcaaatt cagcctccctgggctcagccaatgccaccaactcagcctcaggcgcatcctccatgggca ccgaaacctcaacagcaggcatcaccaccacctgtgagccaatgggtaccaccacaatct cagtctcaaccagctgtaaatgtttgggcaccccaacaccaggaaggttcagttggaaac acagcccaaactgcaacccagaagttgccttcccaaccaatcaagccatggagtccatca cagaccacacagcccactcctccacgacgaatgaactcatataccactgggacaaaggta ccatcccctgttccaataagtagtactatgtcaccctctggttatggatcagctttcgag atgccagccttgagagggaaaggagctgaacttttcgccaagaggcaatccagaatggag aagtacattgtggattctaccacagtgcagtcaaataaggcaagaccatcttcacctact ccttctttgccaaattcctggaaatattcacccaattgtcgggctcccccgcctttggca tataatccaattcattcaccgtcatatccaccaggtgctatcaagcagcctcccccctct agcccttcaacaacaaacaagaacaaaagcaaagagaagggaaaacctgccccgaaacct cttcatgttcttgatgtcatgaaacatcagccctatcagctgaaatcctcccttttcacc tatggcccagcagcagagaaacttgctgcagaaaaggaggcagctgaaaagctagctgcc caaaaagcagctgaagcccaggctcaggcccaggcccaaattcaagcccaagcactaggt gctccaaatcaaaaccagcaaatgacatataaccaagatcctcctccttatggttttatg ccacaaccggcccagcaaccctatggaatggctggtcagtcacctatgcatgaaggcctt taccaccaagtccctcctgatacatatcagcctgtcctaaatgcttatcaacaacatcct catcaagtcccatttcagcaagaatacaacccccaacaaacttaccaacaacctccttta aatccttaccaacaagcaccaagtcctccctaccagcagccctccccaccctcctatcag gcaggtcctaatctagtatatcaagctggacctgcactgacctaccaaccagcccctagt tcttatgttgtgccatctttcccagtagcagcaagggctgactctgcctcaggaggcagt attactgctgctccaaagcccaaattttcagccaagaagagtgcggcccaggtgtggaag ccaagcactgctgaaaaatag

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