Ctenopharyngodon idella (grass carp): 127515807
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Entry
127515807 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4a isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127515807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127515807
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127515807
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127515807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-RING_2
zf_RING_Vps8
PHD_NSD
WWE_5
zf-UDP
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
127515807
NCBI-ProteinID:
XP_051755833
LinkDB
All DBs
Position
7:25854526..25876932
Genome browser
AA seq
704 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGAGSVVLGQVDSRLSPYIIDL
QSMHQFRQDTGTLRPVRRSFYDPRSAPGQGWVWEWENDSGSWTAYDTEVSIAIQAARDRQ
QPWLDLTPLGFCYLIDLQSMTQINGQTQRRRRIQRRSDLAYPLVSGPLPKPHAWSSAGSG
GLLGVGVSGVSGGNGSAYPSGALPASAITSLGQPCSCQQCMLVLGVKTPSMAQTLGRKPP
PIPKPPSPKAPSRGHSYSLTLPHPPSLSRVLSPHRNSTSGASGGFGHSLSLLGSATAALS
ISSNRPPPPAVPPPPPPSTIPHTTSVSNPTAPTPSNALISTATTCAPTPSARVLGPVSTA
SAACAAPVPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGIT
GILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGRTSEEVVR
RYLQKVRNPPEEDCTICMESLCGPSGYKGPGVGGISRAESVGRLSQCGHQYHLQCLVAMY
NNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQG
PEHPNPGKPFTARGFPRHCYLPDSEKGRLVLKLLLVAWDRRLIFSVGTSSTTGETDTVIW
NEVHHKTEFGSNLTGHGYPDSGHLDNVLEELRAQGITEEECLRD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttgttagcctcggccgtggtcgtctgggaatggctgaacgagcacgggcgctggcga
ccctacagcccggcggtgtcccatcatatcgaggcggtgatccgcagcgaccctcgcggc
gccgggagcgtggtgctgggccaggtcgactcgcgtctatcgccgtacatcattgacctg
cagtctatgcaccagtttcggcaagataccgggacactaagacccgtgcggcgaagtttc
tatgacccgcggtcggctccggggcagggttgggtgtgggaatgggagaatgactcgggc
tcatggacggcgtacgacacagaggtcagcatcgccatccaggcggctcgggaccggcag
cagccctggctggacttaacgccattgggcttctgctaccttatagacctgcagagtatg
acgcagatcaatggacagacgcaacggcgccggcgcatccagaggcgctcagacctggcc
tacccgctcgtctctggcccactacctaagccacacgcgtggtcgtccgccggaagtggt
ggactcttgggggtgggagtttcaggggttagtggagggaatggcagtgcctatcccagt
ggagctctcccagcttctgctattacttcactgggtcaaccatgttcctgccagcagtgt
atgctagtcttgggcgtcaagacccctagcatggcacaaactctcgggcggaaaccacca
ccaatacccaagccgccgagcccaaaggcgccatcaaggggacactcttactctcttacc
ctgcctcaccctccttccctttccagagtcctctcgccacataggaactccacctcgggt
gctagcggaggctttggacactccctctctctgctgggttcagccactgccgccctgtcg
atatcctctaaccgtcctcctccacctgctgtaccgccacccccgcctccttctaccata
ccccacacgacctctgtgtccaaccctacagcacctacaccctccaacgcccttatatct
acagcgaccacctgcgctcccacgccctctgctcgtgttctgggtcctgtgtccacggca
tcagcagcttgtgctgccccggtgccacctcgcagtagtctggcaggccttagccgcccc
gccctgcagagaatcgccatggcacagtcacgggcactcattgcatcaggagtccccacc
gtcccagtgaagaacttaaatggatccagtcctgtccatccagctttggcaggtatcact
gggattctaatgagtgccgctggactcccagtctgcttgacccgcccacccaaacttgtg
ctccaccccccacctgtcagcaagagtgacatcaaacctgtgccaggcctcggccactgc
tgccggaaaaccacaaagaagcaggcccgcaaaggtagaacttcagaagaagttgttaga
agatatctccagaaagtccgcaacccacccgaggaggattgcactatctgtatggagtct
ctctgtgggccatctggctataaaggcccaggtgtcggtggcatttctcgggcagagtcg
gtcggtcgactgtctcagtgtggacatcagtaccacctgcagtgcctggtggccatgtac
aacaacggcaacaaagacggcagccttcagtgtcccacctgcaagaccatctacggtgtt
aaaaccggcaaccagccaccaggcaagatggaataccatgtcattcctcactcccttcct
ggacaccctgactgcaaaaccatccggattatctacaacataccccctggcattcagggt
ccagagcatcccaaccctgggaagcccttcacagcacgtggatttccaagacactgctac
ctccctgacagtgagaaaggccgtctggtgttgaagctgctgctggttgcttgggaccgc
cggctcatcttctcggtgggcacatccagcactacaggcgagacggatacggtcatttgg
aacgaggtgcatcacaagaccgagttcggctccaacctgaccggccacggttacccagac
tccggccaccttgacaacgtcctggaagagctgagggcgcaaggcatcactgaggaagag
tgtctgagggactga
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