Ctenopharyngodon idella (grass carp): 127515930
Help
Entry
127515930 CDS
T08802
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127515930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127515930
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
Pre-60S particles
GTPases
127515930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
127515930
NCBI-ProteinID:
XP_051756067
LinkDB
All DBs
Position
7:33194738..33311373
Genome browser
AA seq
1151 aa
AA seq
DB search
MTPATVSTHIYASWSGGNIKSKMGHTSLEKIIALQKRTTQIRNLCILAHVDHGKTTLADC
LVASNGIISSRLAGKLRYLDSREDEQIRGITMKSSAISLHYATGGTDYLINLIDSPGHVD
FSSEVSTAVRLCDGAIVVVDAVEGVCPQTQVVLRQAWLENIRPVLVINKIDRLIVELKLT
SQEAYTHLQKILEQVNAVTGTLFTSKVLEERAEKEAETPSSYAENDSGDQVYDWSAGLEE
TDDSDLYFSPDRGNVVFASAIDGWGFRIHQFAEMYSQKMGIRFWVLLKTLWGDFYLNAKA
KKIMKGAQSKGKKPLFVQLVLDNIWSMYDAVVTRRDKEKVEKMVTSLGVKVLPRDLKHSD
PKVLLSAICSQWLPVSQAVLSMVCEKLPSPAEISAERVEKLMSVGARRFDSLPEKTQELK
KAFLDCSADETAPVIVFVSKMFAVDSKSLPQNKQRPLTQEEIAQRRELARQRHAERQAAN
QSADSPGSADAGGTSTPAAPATGSVTDALCVQTEALSVRTASEEDNKEHFVAFARVYSGV
VRKGQKVFVLGPKYDPSLALRVLPEGCSVADVLPSVPHMACCTVDSLYLLMGRELEELDE
VPSGNVLGIGGMEDFILKSATISTSPACPPFTPINFEATPIVRVAIEPKHPSEMPKLVRG
MRLLNQADPCAEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASEPIIPFRETV
IRPPKVDMVNEELGKQQKVAVIHQVKDEQTKYHEGVQVDSTGLVKLTTSNKMATVRVRAI
PLPEEVTRLLEDNVGLIRTMEQFSLFAGEGKTLDINQKILEDIQEFKVKLESTLQGHKWR
GAVEHIWAFGPRRCGPNILLNSIEGYRRPSLWQCLEQEKEIEKAETTALRDFDNSIVSGF
QLATLSGPMCEEPLMGVCFSVETWAMKLPTPQTQQVSIDEESQPAEPNNDNQGERSDVHE
TNVSSTSSNRSRSRAETAGSSVDCYGPFSGQLIAAMKDACRYAFQAKPQRLMAAMYTCEI
MATAEVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLAS
PQLVFSHWEVIPSDPFWVPTTEEEYLHFGEKADSTSQALKYMNAVRRRKGLYVEEKIVEH
AEKQRTLSKNK
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgcgacggtcagcacgcacatttacgcttcctggagtggaggaaacataaag
tcaaaaatgggtcacacaagtttggagaagataattgcactgcagaagagaacgacacag
atcagaaatctgtgtattcttgctcatgtagatcatgggaagacgacattagccgactgt
ctggtggcgagtaatggtattatatccagtcgtttagcaggaaagctgagatatctggac
agcagggaggatgagcagatcagaggaatcactatgaagtccagcgctatttcattacat
tatgcaacaggaggaaccgactacctcattaatctgatcgactctcccggtcatgtggac
ttctcctcggaggtgtccactgccgtcagactgtgtgatggggccattgttgtggttgat
gccgtggagggagtgtgtccgcagacacaagttgttttacgacaagcttggctggagaat
attcgtcctgttcttgtcatcaacaaaattgaccggctgattgtggagctgaaactcact
tcacaggaggcgtacactcacctgcagaaaatactagagcaggtgaacgcagttacaggc
acgttattcacctctaaagttctggaggagcgagcggagaaagaagcagaaactccgagc
agctatgcagagaacgacagcggagatcaggtgtacgactggagcgccggtttagaggaa
accgatgactctgacctctacttcagtcctgaccggggaaatgtagtatttgccagcgct
atagacggctggggcttcaggatccatcagtttgctgagatgtacagtcagaagatgggc
atccgcttctgggttctgctcaagaccctgtggggcgatttctacctcaacgccaaagct
aaaaaaatcatgaagggagctcagtccaaaggaaagaagcctctgtttgtgcagcttgtc
ctggataacatctggagtatgtatgacgctgtggtcactagaagggacaaagaaaaggtg
gagaagatggtgacctctctgggggtaaaagtcctgcctcgtgacctaaaacactcggac
cccaaagtgcttctcagtgccatctgtagccagtggcttcctgtgtctcaagctgtgctc
tcaatggtgtgtgaaaagctgcccagcccagctgagatctcagctgagagagtggaaaag
ctgatgagcgtgggagcgcgcaggttcgactctctgcccgagaaaacacaggagctaaaa
aaagcatttctagattgttcagctgatgagacggcgcctgtaattgtctttgtgtcaaag
atgtttgccgtggactccaaatctctgccacagaacaaacagaggccgttgactcaggag
gagatcgcccagagaagagaactggccaggcagcggcacgccgagagacaagctgccaat
cagagtgcagatagccccgggtcagctgatgctggaggtacttcgaccccagcagccccg
gccaccggtagcgtcacagatgctctgtgtgtgcagacagaggctctttcggtcagaact
gcatcggaggaggataacaaagagcattttgtggcctttgcacgagtctacagcggtgtc
gtcagaaaaggccaaaaggtgtttgtgctcggacccaaatacgatccgtcactggctctc
agagtgcttcctgagggttgttcagtagctgatgtcttacccagcgtcccccacatggcc
tgctgtaccgtggacagcctctacctgctgatgggccgcgagctggaagaactggatgaa
gttccctcaggaaatgttctcggtattggtggcatggaggacttcattctcaagtcggcc
accatctcgacatctcctgcctgcccacccttcacgccaatcaactttgaagccacgccc
atcgtcagagtagcaatcgagcccaaacatccaagtgagatgccgaagctggtgcgaggt
atgagattgctgaaccaggctgacccatgtgccgaagtgttgattcaggagaccggagag
catgttctggtcactgcaggggaagtgcacctacaacgctgcctggatgacttgagagag
aggtttgctaaaattgaaatcagtgcttccgaaccaatcattcccttccgtgagacggtg
atccggcctcccaaagtggacatggtgaacgaggaattgggaaagcagcagaaggtcgct
gtgattcaccaggtaaaggacgaacaaacaaagtatcacgaaggagtccaggtggattcc
accggtctggtcaagctcaccacctccaacaagatggccacggtcagggtgcgggctatc
cctcttcctgaggaagtcacccgccttctggaggacaatgtggggcttatccgcacaatg
gagcagttcagcctcttcgccggggagggcaagactctggacatcaaccagaaaattctg
gaggatatccaggagttcaaggtgaagttggagagcaccctgcaaggccacaaatggagg
ggtgccgtggagcatatctgggcatttggtccacgccgttgcgggccaaatattctcctc
aacagcatcgagggctaccggagaccctcattgtggcagtgtctggaacaagagaaggaa
attgaaaaggctgagaccaccgcgcttagagactttgacaacagcattgtaagtggcttc
cagttggccacactctctggtcccatgtgtgaagaacctttgatgggggtttgcttctct
gtagagacctgggccatgaagcttcccacacctcaaactcagcaagtctcaatagatgag
gagtcacaacctgcagagccaaataatgacaaccaaggtgaacgctctgacgttcatgag
acgaacgtctcatccacaagctctaaccgaagcaggagcagagcggagactgctgggagt
tcagtggactgttacgggccgttctcaggacagctcattgctgctatgaaagacgcctgc
agatacgctttccaagctaaacctcagcggctgatggctgcgatgtacacctgtgaaatc
atggccactgctgaggtcctgggtcgtgtgtatgctgtattgtccaagcgggaaggacga
gtcctacaagaggaaatgaaggaagggacggatatgttcatcattaaagcagtacttcct
gttgcagagagcttcggattcgctgacgagatcaggaagaggaccagcggcctggccagc
ccacaactagtcttcagccactgggaggttatccctagtgatccattctgggtgcccact
accgaggaggagtatttacactttggagaaaaagcggactcaaccagtcaggctctgaaa
tacatgaacgccgtacgaagacgcaaaggcctctacgtggaggagaagatcgtggaacac
gcggaaaaacaacgaactctcagcaagaacaaataa
DBGET
integrated database retrieval system
