Ctenopharyngodon idella (grass carp): 127516024
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Entry
127516024 CDS
T08802
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127516024
Membrane trafficking [BR:
cide04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127516024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
127516024
NCBI-ProteinID:
XP_051756242
LinkDB
All DBs
Position
7
Genome browser
AA seq
1749 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAKHLLH
RLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLHSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTSEWLHCINKERGCKREGGGCLDTCLVSTCDGVVR
IPWEEVVYPKLLHNPSDPLQDNSDPTLGSSGEHDSWSWDEEDDLPPDGNEAEIEAALECL
RRSSDDHLLGDGAGDYVELLEPRGGPDGGADPKQRYLEMHGICKTKTLPLCRRGKAIRLR
KGKGRGYGRTEPGARAGSLVRRDSNNSGKDGVVSCSDLATSRPLPRVIDLGRQRRSYSPS
FQDSDEGAKDPVGLECGSRCINNPAKERRPGVGKERDGTGGTLPCQRKNGSSGRCSIDSN
DVAKNNAESLGEEQQDHTQRSHCGCDDTILDSTLNSRHEVATLTNPSNAADNSTIPLAVY
GETEGINKQLAGQSRTSTTSLRDSSMNNASDLSGCAQSRTKHSDNTSDEKTDKIMPPSGT
LSTMGEKRAGKSENFVCPRGKEVKTGGFRAPRRKRKAKGGKGKAKSNGRVQHKGKGDQVI
SKNQSKTTHPISHSSQSEEAPQLSKDCKVSVPATDAETDAKPKAKDGESQSGTSFPDHSQ
KEMGLSESAAHLESKSPPPHLRDLDFNLLQSGKLKLTGTMDRLGRALVFTESHLPEDGWN
ADEMIKVLSCYYTITRPMVKEKGLTVIVDSRKSAPSELCLSALKLFKGQVATGLDSILIL
TEEQEESTQPCLDGIEVHTVRGTGILQQFVDKQQLPREMGGDFNHSHDDWLTFRLSLEQL
TERCECALTLLGDALQSIDTEPLPDCIKVRQHLMNVPRSADKHRQLMTSILTDQRLTELQ
QRGGAWLAGLANGTSGLAQKSPDCKAALAVTSNLYDSVDDALHRLVRVSNQRGRDLEALG
RLATLVDKLDKCEKDIEHIQEQLEDYKHPPLSLSRLSLKQHKFKSFRESAMELHSETLVL
LAEVENWSELDWSGLGAVLDKLPPIREKVRDMSHCLSDCWTQLDNTQRLLSTLTEASQWC
DVVSSSSPSSSSSSPLSSLPPIPPSRFQDARALALDLGGGALLDLWSQTLERYQKTLAQF
KSRILQAERGSSTAQGQEQDSGGRGRTPAPSTSSLGDLEGEIEPDWCPGGGGEGGMQSWG
SLASLFRPQNCSTLKIGEEKKKDGVNPGGGKFLQNLLHPAKKNPTDAPLPPKPPRKRHPS
FDLQALLAPRRSAAVSKPAESTSGQSSPLSWLGRRALTDSILTAGVTAAVPGWRDPAAGG
GGVLIRGVEVSSKEVADHTGFTRQHVLLSRTERETGVERAGATAQSKLYLQWCRLVSTER
QYVAVLKGVEENYLPLLESSDVPSTLRGKTESLFSNWRSLSAFHTQLLLPAMEGALSQTL
QQTDCFSKYKDQFLLYSHYIRMRPEPDALLISQAADFFRSKLSSSLVPAPPFPQCLSTPI
QRLEQYCQTLEELGGLNPTSDSALSILKHAQRHGADLRASDLITGCLIPVAERGELVRQG
ELCVCGGGRRKKTGIRNVFLYQNYVIFTKHKTPNPGCSVYSFKHSIKTGEMGLTQSVGED
GLRFEVWVRQASRTRDCLTLQAASVQDRETWTHDIAQLLWTHAIHNTELCLKESLCMGVS
SKLLLDVTGAQVSELDSSFNLNDRVQSSCSDSSSVGSMKEGDSPASARDSKRNSEQTGHT
QSSSPSTSV
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagaggcggtagaggactgtgtgcagggggcgttatcctctctctatcctcct
tttgaaagcacagctcctcctctcctatctcaggtgttctccgtacttgagtccacctat
cagcatgacagcttgagatatctgctggatttcttcattcctgccaaacatcttctgcat
agattacaacagcatgcatgttctcagtatctaggctgtctcttcttgcactctggttgg
ccactatgtttgggagagaaggtagtagtacagctctctactttggactggagactcctg
catagtactgacttctacctacaggtggtcccattttcaacacgttgtcctcgccttgct
cttaagtgccttgcacctggtgggcggaatgtacaggaggttttagtgccggagtcacaa
cacccgctggtgtttacttctgagtggctacattgcatcaacaaggagcgtggctgcaag
agagaaggtggaggatgtttggacacctgtctagtgagtacatgtgacggagtggtccgt
attccatgggaagaggtggtctatcctaaactcctgcacaatccatccgatcctctccaa
gacaattctgacccaactcttggctcttcaggagagcatgattcctggtcttgggatgaa
gaggatgacttgcctccagatgggaatgaggcagagattgaggctgcattagaatgtctg
cgcagaagcagtgatgaccaccttttaggtgatggtgctggagattatgttgaactgcta
gagccccgaggaggaccagatggtggtgctgatcctaaacagcgctatctggagatgcat
gggatatgtaagaccaaaacattacccctgtgtaggaggggtaaagcaatacgactacga
aaggggaaggggagagggtatgggaggactgaacctggtgctagggctggaagtctggta
cgaagggatagcaacaacagcggtaaggatggtgtagtttcctgcagtgacttggctacc
tcacggcccttgcctcgtgtcattgatttaggtcgccaaaggaggtcatattccccttcg
ttccaggactctgatgaaggtgctaaggacccagtaggtcttgaatgcggatctcgttgt
ataaacaatccagccaaagagaggaggccaggggtaggtaaagagagagatgggactgga
ggtacactgccctgtcagagaaaaaatggatcaagtggccgatgttccatagattctaat
gatgtggcaaagaacaacgcagagagtcttggagaagaacaacaggaccacactcaaaga
tcacactgtggctgtgatgatacaattttggacagtactttaaacagtagacatgaggtt
gcaacattaacaaatccctccaatgctgcagataatagcactatcccgttggctgtttat
ggggaaacagaaggcataaataagcaattggctggacaatctaggacaagtacaacatcc
ctccgagattcctccatgaacaatgcatctgatttatcaggttgtgcgcaaagcagaacc
aaacattcagacaataccagtgatgagaaaacagataaaattatgccaccatcaggtaca
ttgagtaccatgggagaaaagcgtgcgggaaagtcagagaactttgtttgtcccagagga
aaagaagtaaaaacaggtggatttagagcacccaggaggaagaggaaagccaaaggaggc
aaagggaaggccaaatccaatggccgtgtccaacataaaggcaagggtgatcaagtcatc
tcaaagaaccagagcaaaaccactcatccaatcagccattctagccaatcagaggaggct
cctcagctatccaaagattgcaaagtcagtgtaccagccactgatgcagaaacagatgca
aagccaaaggccaaagatggagaaagccagtctggcacatcatttcctgaccattcccaa
aaagagatgggattatctgaatctgctgctcacttggagtccaaatctccccctcctcat
ctcagagacttagatttcaatcttctgcagtcgggaaagctaaaattaacaggtactatg
gatcgactgggacgagctttggttttcacagaaagtcacctcccagaggatggctggaac
gcagatgaaatgatcaaagtgttgtcctgctattacaccatcaccagacctatggtcaaa
gagaagggtcttaccgtgatagtggacagcagaaagtctgccccgtctgaactctgtctc
tctgcactgaagctcttcaagggacaggtggcaacagggcttgactcgattcttatccta
acagaggaacaagaagaatcgacccaaccgtgtctggatggaatagaggtgcatacagta
cgaggtacgggcatccttcagcagtttgtggacaagcagcagttgcccagagaaatgggt
ggagactttaaccactcacatgatgactggctcactttcagactgagtttggagcagctg
actgagcgctgtgaatgcgccctcaccctgctgggagacgcactgcaatctatagacaca
gaaccactacctgactgtattaaggttaggcagcatttgatgaatgttccccgcagcgct
gacaaacacagacagttaatgacaagcatcctcactgaccagaggctgacagagctgcag
cagaggggcggagcttggctggcaggtctggccaatgggacatcaggattggcacagaaa
tcaccagactgcaaggctgctttagcagtgacctctaacctatatgacagtgtggatgat
gcgcttcaccggctggtgcgtgtgtccaatcagaggggtcgtgacctcgaagcgctgggg
agattggctacacttgtggataaactggacaagtgtgagaaagacatagagcacatacag
gagcagctagaggactataaacaccctcctttgtctctcagcagactgtcactcaaacag
cacaagttcaagagcttcagagagtctgctatggagcttcacagtgagactctggtgttg
ctggcagaggtggagaactggtctgagctggactggtctggtctcggagctgtgctggac
aaactccctccaataagggaaaaagtgcgagacatgtctcactgtctgtcggactgctgg
acacagctggataacacacaacggctgctgtctacactaactgaagcatctcagtggtgt
gatgtggtgtcgtcctcctctccttcctcttcctcgtcttctcctctctcctctctccct
cctatccctccatcacgtttccaggatgctcgcgctcttgcactggatctgggcggaggg
gctttgttggacctctggtcccagactctggagcgctatcagaaaacactggctcagttt
aagagccgaatcctgcaggcggaaagaggctcgtctacagcccagggtcaggagcaggac
tctgggggacgaggaaggactcctgcgcccagcacgtccagcctgggggatttagagggg
gaaatcgagccagactggtgccctggaggaggaggagaagggggcatgcagtcctggggt
tcactggcgtctctcttccggccacaaaactgctcaacactcaagattggagaggagaag
aagaaagatggggtgaatccaggagggggaaagtttctgcaaaatctgctgcacccagcc
aaaaaaaatccaacagatgcaccactccctcccaaaccccctcgcaagcggcatcccagt
tttgaccttcaggctctgctggcaccacgtcgttcagccgctgtgtctaaacccgctgag
tccacatcgggacagtcttctccactatcctggctgggccgtcgagctctaacagactcc
atccttacagcgggagtgacagcagcagttccaggatggagggatcctgctgctggagga
ggaggagtgctcatcagaggagtggaggtcagcagtaaggaagtggcagatcatacgggc
ttcacgcgccaacatgtacttctcagtcgcactgaaagagagacaggggtggagagagca
ggagcaactgcacaaagcaagctctacttacagtggtgtcgactggtcagcacagagagg
cagtatgtcgctgttcttaaaggcgtggaggaaaactacttgcccctcctggaatcttca
gacgtcccgtctacactgagaggaaagacagagtcactcttcagtaactggagaagcctc
tctgccttccacacgcagttactcctccctgccatggagggtgccctctctcagacacta
cagcagaccgactgtttcagtaaatataaggatcagttccttctatattcccactacatc
cgtatgagacctgagccggatgctctgctcatcagtcaggctgctgacttcttcaggtca
aagctgtcttcctctcttgttcctgctcctccgtttcctcagtgtctctccactcccatt
cagagactggagcagtactgccagacactagaggaactgggcggtcttaatcccacttca
gactcagccctctccatcctaaaacatgcccagcggcacggagcggatctgcgagcaagt
gatctcatcacggggtgtctaatacctgtggcagagcgtggagagctagtgcgtcagggt
gagctgtgtgtgtgcggtggaggtagacggaaaaagacaggaatcagaaacgtcttcctc
tatcagaactacgtcatcttcaccaaacacaaaacacccaacccgggatgtagtgtgtac
agcttcaaacacagcattaagacgggtgagatgggcctcactcagagtgtcggggaggac
ggactgaggtttgaggtgtgggtgagacaggcgtctcgcaccagggactgtcttactctc
caggccgccagcgtgcaggacagagaaacctggacccacgatattgcacagctgctctgg
actcacgccatccataacacagagttgtgtctgaaggagtctctgtgcatgggagtttcc
agtaagctgctactggatgtgacgggagctcaagtttcagaactggactccagcttcaac
ctgaacgacagagttcagagcagttgttcagattcgtcttctgtgggcagcatgaaagag
ggtgactcgcccgcctctgcaagagattcaaagagaaacagtgagcaaacaggacacact
cagagctcttcaccctccacctctgtgtga
DBGET
integrated database retrieval system
