Ctenopharyngodon idella (grass carp): 127516217
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Entry
127516217 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127516217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127516217
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127516217
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127516217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-RING_2
zf_RING_Vps8
PHD_NSD
WWE_5
zf-RING_Vps41
zf-ANAPC11
zf-UDP
PHD
Motif
Other DBs
NCBI-GeneID:
127516217
NCBI-ProteinID:
XP_051756576
LinkDB
All DBs
Position
1:complement(35714048..35736546)
Genome browser
AA seq
734 aa
AA seq
DB search
MDTMLLASAVVVWEWLSEHGRWRPYSPAVSHHIEEVIRSDPRGGSVVLGQADSRLSPYII
DLHSMHQFRQDTGTLRPVRRSFYDPTSAPGQGWIWEWENDTGSWTAYDMEVSIALQAARD
RQQPWLDLTSLGFCYFVDFQTMTQINRQTQRQRRIQRRSDMVYPLVTGPLPKTSQAWGTG
SGAGGMARGVTSGGGSNGALLGVGVSGSTLSRKGSAVYPSGMLSVSSLAPLGQPCACQQC
MLVLSVKANGTASQTLGRATKPNSPKSNFGTLPSSSASMSVLNSYSHTLPHGASLKCSPS
EEAKNSAVFDQSLSLLTSGTANLSVSSSRPTPSSLPPPPTLPSSNQQPPSAPNTSSSATF
VPTAILVNTSTSPTPSTVKMSSATMLASQRSAACAAPIPPRASLAGLSRPALQRIAMAQS
RALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAGLPVCLTRPPKLILHPPPVSKSD
IRPIPGIGHCCRKTTKKQARKGKTPEEVVKRYLQKVRNPPEEDCTICMEALGGPSGYKGP
GVASVSRAESVGRLAQCGHLYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKM
EYHVIPHSLPGHPDCKTIRIIYNIPAGIQGPEHPNPRKPFTARGFPRHCYLPDNEKGRKV
LRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGFPDSGYLDNVLEE
LKAQGITEDEEQQL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgttactggcttctgccgtggtcgtctgggaatggctcagcgagcacggg
cgctggcggccgtacagcccagccgtgtctcaccacatagaggaggtgataagaagcgat
ccccgcggcggcagcgtcgttctaggccaagctgacagccgcctgtcgccctatatcatc
gatctacactccatgcatcagttcagacaggataccggtacgttaagaccagtgcgacgg
agtttctatgaccccacctcagcaccaggccaaggttggatatgggagtgggaaaatgac
acaggttcctggacagcctatgacatggaggtgagcattgccttgcaagcggcacgggac
cgacagcaaccctggctggacctgacatcgttgggcttttgctactttgtggacttccag
accatgacccagattaacaggcaaacgcagcggcagaggcgcatccagagacgctcagac
atggtttaccctctagttactgggcctctgcctaaaacttcacaggcttggggtactggc
tcaggggctggaggcatggctagaggagttacatcaggtggagggtcaaacggggcactg
cttggggtaggcgtttctggttctaccctaagtagaaaaggaagtgcagtttacccaagc
gggatgctttctgtatcatctcttgctcctcttggacagccctgtgcctgccagcagtgc
atgctggtgttgagtgtaaaggcaaatggcactgcatcacagacactaggacgtgcaaca
aagccaaacagtcctaaatccaactttgggacacttccatcctcctctgcatccatgtct
gttttaaactcgtattctcatacactaccacatggcgcatctttaaaatgctcgccctcg
gaagaagccaagaattctgctgtttttgatcagtctttgtcccttctcacttcaggcact
gccaatctctcagtctcctctagtcgcccaacgccttcatctttgcccccacctccaact
ctgccatcatcgaatcagcagcctccatccgccccaaacacatcgtcttcagcaacattt
gtgccaactgccatacttgttaacacgtcaaccagtcctacaccatccacagttaagatg
tcatctgcaacaatgttggcctctcagcgctccgctgcctgtgctgccccaataccacct
cgtgccagtctggcagggcttagtcggcctgctttgcagagaattgccatggcacaatca
cgggcccttattgcctctggggtaccgacagtaccagtgaagaatcttaatggctccagc
cctgtccatcctgctttagccggtattactggtattctgatgagtgcagcaggactacct
gtatgtttgacccgtccaccaaaactaattctgcatcctccacctgtcagcaagagcgac
atcagaccaattcctggcatcgggcactgttgccgcaagaccaccaaaaaacaagcccgc
aaaggtaaaacaccggaggaagtggtaaaaaggtatttacagaaggtcaggaatccacca
gaagaagattgcaccatctgtatggaggctctgggggggccctcggggtataagggtcca
ggtgtagcgagtgtttcacgtgcagagtcggtcggacgactggcgcaatgtgggcatctt
tatcacctgcagtgcctagtggccatgtacaacaatggcaacaaagatggcagtctgcag
tgtccaacatgcaagacaatatatggagtaaaaacaggcaaccagccgcctggtaagatg
gagtaccatgtcatcccgcactcacttccaggacacccagactgcaaaaccattcgcatc
atctacaacataccggctgggatacagggtcctgagcatccaaatccacggaagcctttc
actgcaagaggatttccccgacattgttatctcccagacaatgaaaaaggacgcaaggtc
ttaaggcttttgttggtggcgtgggaccgacggctgatcttctcagtgggaacctccagc
accacaggagaatcagacactgtcatctggaatgaggtccaccacaagacagaatttggc
tccaatcttactggacatggctttccagattctggctatctcgacaatgtgctagaggag
ctcaaagcccagggcatcactgaagacgaggaacagcagctgtga
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