Ctenopharyngodon idella (grass carp): 127516272
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Entry
127516272 CDS
T08802
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127516272
04121 Ubiquitin system [BR:
cide04121
]
127516272
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127516272
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127516272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like_helical
ZBED1_RNase-like
zf-BED
DUF659
FAM200-ZBED5_RNase-like
DBD_Tnp_Hermes
DUF8247
zf-C2H2-SPIN-DOC
DUF7896
Motif
Other DBs
NCBI-GeneID:
127516272
NCBI-ProteinID:
XP_051756699
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All DBs
Position
7
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AA seq
515 aa
AA seq
DB search
MPRDLGVSVTLGYYCVRRMAAPPEIADPPDTFKSIVWEHFGFSVEYRNGIRVVDKAHTIC
RNCFTKLTYMTGNTSNMQAHLRRHHPNIDISGTRKKPQKQETLPTAFRMKLQANSDRAQT
ITKAIGVFMALDMQPFSVVENDGFTHLLSVLEPRYQLPSRPHFSQNVLPHLYSEVKAKLV
EDLSNAKFIALTTDGWTSRATQSFMTITAHCITDNWVINNPVLQTRAVYESHTSDHLSEI
LQAAVAEWKIDRENATIPVTTDNAKNIVNAVEAAGFSPNIRCFAHIVNLASQKGMGVNQM
SQLLGRVRKVVTFFHRSTTAAAVLKDKQEMLHLPPHKLIQDVPTRWNSSYDMLERYLEQQ
AAVFSALTDRSIKRNIKDIVTLSDEDIKLAEDIIQVLKALKMVTTLLSTEQLPTVSMIMP
LKHTILESMKVSDTNTTVVKDVKSAIVSDLINRYPESDSILVQFLHMSTALDPRFKSLPF
LDETMRSNLFNSLMEKILEYHPQQVFFIIIVLIQT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtgacttgggagtgagcgtcacactcggttactactgtgtacgcaggatggct
gctccgcctgagattgcagatcccccggacacatttaagtctattgtgtgggaacatttt
ggtttttcagtggagtacaggaatggaattcgtgtcgtagacaaagcacacacaatctgt
cgtaactgtttcacaaaacttacttatatgacaggaaacacgtctaatatgcaagcgcat
ctccggagacatcaccccaacattgatattagcggcacacgtaagaagcctcaaaagcag
gaaactcttcccactgccttcagaatgaagctacaagctaactctgaccgtgctcaaaca
attacaaaggcaataggtgttttcatggcactagatatgcagccgttttccgttgttgag
aatgacggattcacgcatttgctaagtgtgttggagcccagataccaattaccgagccga
ccgcatttcagtcagaatgtgctgcctcacctttacagcgaagtaaaagccaaactagtg
gaagacctgagcaatgctaaattcattgctttaactacggacgggtggacctcacgtgca
actcagtctttcatgacgatcacggcgcactgcattacggacaactgggtaattaacaat
ccggttctgcagacacgcgctgtctatgaaagccacacaagtgatcatctgtcagaaata
ctacaggcagctgtagcagagtggaaaatcgacagagaaaatgccactattcctgtgaca
acagataacgctaaaaacattgttaatgcagttgaagcagccggtttttcaccaaatata
cgatgttttgcgcacatagttaatctggcatcacagaagggaatgggagttaaccagatg
tcacagcttttaggcagagtgcgaaaggtggtcacctttttccatcgtagcactactgct
gcagcagtgctgaaggacaaacaagagatgctccatctgcctccacacaagctaattcag
gatgttcccaccaggtggaactccagctatgacatgcttgagcgctaccttgaacagcag
gctgctgttttctctgcacttacagacaggagtattaagaggaacattaaggacattgtt
actctatctgatgaagatataaaattagctgaggacatcattcaggttcttaaagccctg
aaaatggtcacaactctgctaagcacagaacagctgccaaccgtatcaatgataatgcca
ctgaaacacaccatcctggaatctatgaaagtgagtgacaccaatacaacagttgttaaa
gatgtcaaatctgccattgtgtccgacttaatcaacagatacccagaatctgactcaata
cttgtgcagtttcttcatatgagcactgcacttgacccacgttttaaatctctgcccttt
ctggatgaaaccatgcgcagcaacctctttaatagcctgatggagaagattctggaatac
catccccagcaggtattttttattattattgttttaatccaaacttaa
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