Ctenopharyngodon idella (grass carp): 127516327
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Entry
127516327 CDS
T08802
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04350
TGF-beta signaling pathway
cide04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127516327
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127516327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127516327
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
DCC/UNC5 family
127516327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
NDNF
fn3_SORL1
Tissue_fac
Fn3_Dep-1_3rd
fn3_2
GH101_dom-5
C1-set
Arylsulfotran_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
127516327
NCBI-ProteinID:
XP_051756795
LinkDB
All DBs
Position
7:44174847..44352804
Genome browser
AA seq
1449 aa
AA seq
DB search
MAERGARLLLSLFCLTITVSHAEKGSAVRNFSPFRFSTEPSDTLAVRGAPTLLNCSVHSE
SPAKIEWKKDGSFLSLASDDRRQVLADGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI
ISRTARLSVAGIPRYLSQPETASVWVGDSHVLNCEVNPDLVSFIRWEQNKEPVELDQRVF
TLPSGALVISNATEADAGLYRCVIENAGPTKTSEEAQLQILPESGEERNLKFLLEPQHVS
KVVGESVLLPCVVTGYPTPSVTWMYKDQLIEYSKGRFEVLGGGSLRIFNLTEEDAGVYNC
LADNVNGSIEAQTELTLKASPQFLKKPANIYAHEATDIIFECEVTGSPAPTIKWVKNGDA
VIPSDYFKIIKEQNLQVLGLVKSDEGFYQCLAENDAGNVQSSAQLIILDQDVAIPSPPPT
SLTRATTDHLMPGSRGGAGPTPSAPRDVVASLVSTRFIKLTWRLPAETHGDDVTYSVYYS
LEGTNRERIVNTSRPGEMQVTIQNLMPDTKYAFRVVAHNRNGPGESSAPLRVATQPEVQV
PGPAPNLHAVVTSPTTVSLRWDMPLIGNGEIQNYKIYYMEKGMDNEQDLDMNTLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDISVRTYSDVPSAPPQNMTVEVLNSKSIMIRWQPPP
ADAQNGEIIGYKIRYRKGTRKSEVAEITSGSQLYQLIDGLQRGTEYMLRVSAITVNGTGP
ATDWTAAETFESDLDETSVPDVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYTIGYGIGS
PHAQTIKVDYKQRYYTIENLNPSSHYVITLKAFNNVGEGIPVYESAITRPQSDPIDPDVD
LYELFHAPYTPVPDPLPMLPPVGVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWK
TNIPANTKFKVANTTTLTHTVTGLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFETTPSS
APKDVTVVSKEGRPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLT
HQIQELTLDTTYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMANDQASGPVKQGRPSA
PEQGFGSVGKPDMSGTGDNHILVIVIIVSVGAFTIIVVVVGAFLCTRRTTTQQKKKRAAC
KSANGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRTSQDITPVDG
SMDPMLQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHH
HYHLGSLASPTRSYLHHQSSTRSIATPISHLDRAESTESIRNTPSADLLPPSGQPSCTTD
LSETDISYHSSVTEEEPAFTTPTAHVRPTHPLKSFAVPAIPAHPMYDSAALPSTPLLSQT
GPHSVKTASIGTLGRTRTPMPVIVPSAPDVSEGSRLHEDAGSNYETDELTEEMAHLEGLM
KDLNAITTA
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacggtttca
catgctgaaaaaggatcagcagtgaggaacttcagcccattccggttctccacggagccg
tcggatacactggcggtgaggggagcgccgacgctgctcaactgctcagtccacagtgag
tctcctgccaagatcgaatggaagaaagatggctctttcctcagcctggcctcagatgat
cgcaggcaggtcctggccgacggttctctgctcatcagctcagtggtgcactctaaacac
aataaacccgatgagggggtttaccagtgcgtggccactatagacaacctgggcaccatc
attagccgtacagctagactcagtgtagcaggtataccacggtatctcagtcagccggaa
acagcgtcggtgtgggtgggtgacagtcacgtgctgaactgtgaggtgaatccagatctg
gtgtctttcatccgctgggaacaaaacaaagagccggttgagctggaccagagagtgttc
acgctgcccagcggtgctctcgtcatcagcaacgccacagaggcagacgcaggcctgtat
cgctgcgtgatcgagaacgctgggcccaccaagaccagtgaagaggcgcaattacagata
ctgcctgaatccggcgaggagaggaatctgaagtttctcctggagcctcaacatgtgtct
aaagttgttggggagagcgtgctgctcccctgtgtggtgacgggatatcccacaccctcc
gtcacatggatgtacaaagaccagctcattgagtacagcaagggccggtttgaggtgctc
ggcgggggcagtctgcggatcttcaatctcacagaggaagacgccggtgtgtacaactgc
ctggcagacaatgtcaacggctccattgaggcccagactgagctcacgctgaaagcttcc
ccacagttcctgaagaaacctgctaacatatatgctcatgaagccacagacatcatcttc
gagtgtgaggtcaccggctcgcctgctcccaccatcaaatgggtgaagaacggagatgcc
gtcattcccagcgactatttcaagatcattaaggagcagaacttgcaggtgctgggactg
gtcaagtcagatgaaggtttctatcagtgtttagctgagaatgacgctggtaatgtgcag
tcgagtgctcagctcatcatactggatcaagatgtagccatcccctcaccccctcctacc
tcactgacccgtgccactactgaccatctaatgccaggctccagaggcggcgctggtccc
acgccctccgccccccgtgacgttgtggcctccctggtctccacccgcttcatcaagctg
acctggcgccttcctgctgaaacgcatggagatgatgtcacctactccgtctactacagc
ctggagggcactaacagggagaggatagtgaacaccagtcgtccaggagaaatgcaagtc
accattcagaacctcatgccagacaccaaatatgccttccgcgtggtggcccacaacaga
aacgggcctggagagagttcagcgcctctgagggtagccacccaacctgaagtccaggtt
cctggtcctgctccaaacctacatgcagtggtcacgtcccccaccacagtgagcctcaga
tgggacatgcccctcataggcaatggcgagatccaaaactacaaaatctactacatggag
aagggcatggacaatgagcaggatctggatatgaacacactgtcctacaccatgactgga
ctgaagaagttcaccgagtacagtttcagagtggtggcctataacaaacatggacctgga
gtctccactgaggacatatccgtgcgcacatactctgatgtccccagtgctccgccacag
aacatgacggttgaagtgctgaactctaagagcatcatgatcagatggcagcctccaccg
gcggatgctcagaacggtgagatcatcggctacaagatccgctacaggaagggtacgagg
aagagcgaggtggcggagattacttcaggatcgcagctctatcagctcatagatggtctg
cagcgaggcactgaatacatgttgcgagtgtctgccattacggtcaacggcacgggtcca
gccacagattggaccgctgccgagacgtttgagagtgatctggacgagaccagtgtgcca
gacgtccccagctccttacatgtgcggccgcttgtgaacagcattgtagtgagttggaca
cccccggagaaccaggacatcgtggtgaggggttacaccatcggctacgggatcggcagc
cctcacgcccagaccattaaagtggactacaaacagagatactacaccattgagaacttg
aatcccagctcgcactacgttatcacactgaaggccttcaacaacgtgggggagggaatc
cctgtgtacgagagcgccatcacacgaccccaatcagaccccatagaccctgacgttgat
ttgtacgaacttttccatgctccatacactccagtaccagaccctttacccatgctgcct
cctgtgggcgttcaggcgtccgttctgagccacgacactatcaaagtcacctgggcggac
aactcgctgcccaagaaccagaagatcacagatgcacgttactacacagtgcgctggaag
accaacatacctgcaaacacaaagtttaaggtggctaataccaccaccctaactcacacg
gtgacgggtcttaagcccaacaccttgtacgagttctctgtcatggtgactaagggccgg
aggaccagcacctggagcatgactgcacatggaacaacttttgaaacaaccccaagttct
gcacctaaagatgtgactgtagtgagcaaagagggacgaccacgaaccatcatcgtcaac
tggcagccaccttcagaagccaatggcaagatcacaggttacatcatttactatagcact
gatgtgaatgcagaggttcatgattgggtcattgaaccagtagtgggaaacaggctaacc
catcaaattcaggagctgacccttgataccacctactacttcaagatccaggcacgtaac
tccaaggggatgggtcccatgtctgaagctgtccagtttcgcactcctaaagctgaatcc
tctgacaaaatggctaatgaccaagcttctggtccagtgaaacaaggaagaccctctgca
ccagaacaaggctttggatcagtcgggaaaccagacatgtctggcactggtgataaccac
atcctggttattgtcatcattgtgtctgtgggtgcttttaccatcattgtggtggtggtt
ggcgccttcctgtgtacacgccgtaccacaacacagcagaagaagaaacgtgcagcctgc
aagtccgccaatggatcccacaagtataagggcaactccaaagatctgaagccaccagac
ctctggatccaccatgaacgcttggagctaaaacctattgacaaatcgcccgaacccaat
ccagttatgaccgacacgccaatcccccgaacctcccaagacatcaccccggtggacggc
tccatggatcctatgctccagagacgtaactcctaccgtggccatgaatcagaggacagc
atgtctacactggcaggccgtcggggaatgagacctaaaatgatgatgccctttgatgca
caaccccctcagcctgtgattagtgctcaccccatccattccctcgataaccatcaccat
cattatcacttgggcagcctggcctcgccgacacgcagctatctccaccaccagagcagc
acacggtccatcgccacccccatctctcatctagacagggcagagtccacagagtctata
aggaacacccctagtgccgacctgctccctccttctgggcagccctcctgtaccactgac
ctttcagagacagacattagctaccacagctcagtcactgaggaggagccagcgttcact
acgcccacagcacacgttcgtcccacgcacccactcaagagttttgcagtgcctgccatc
ccagctcaccccatgtatgactcagcagcattgcccagcactccactgctgtctcagaca
gggcctcactcagttaaaacagcctccatcggtacgttgggaaggacgagaactcctatg
cctgtcatagttcctagtgcaccggatgtctcagaaggcagcagacttcatgaagatgca
ggaagtaattacgagacggacgagttgacggaggaaatggcccatctggagggcttaatg
aaggacctaaacgccatcacgacagcctga
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integrated database retrieval system
